Conserved Protein Domain Family
tail_200_repeat

?
NF032891: tail_200_repeat 
tandem large repeat
This HMM describes a domain of nearly 200 amino acids, found in up to 14 tandem repeats in the C-terminal region of very large protein, in Vibrio parahaemolyticus and related species.
Statistics
?
PSSM-Id: 467960
Aligned: 51 rows
Threshold Bit Score: 130.872
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_065742252 2594 PPTVdGEI-VFSPEFPVD--GQNVTITVNFSELVTGVTATVGGVDV--KFEGnDP--AQQWVGetEGPVTLS-SneDTIT 2665 Vibrio corall...
WP_012535454 2507 LPTV-SNT-VFNPIHADN--LKTVEVKVDFSVGVSDVKATLLTAPV---SWI-SGqnSDKWVG--SVVVPAS-S--DDQL 2573 Aliivibrio fi...
WP_012535454 2702 KPTL-TSV-VSNPTFGNT--GDKIGVTVNFSVAVSNATAKLGSSDV---TWV-SGqdTATWVG--EVTIPNS-SpmDTEW 2770 Aliivibrio fi...
WP_043010840 1810 VDLV-ELVtPTIPTH-----NSTMEVKVTFSEAVSGLSGDFAGVEM--VFTSeGDspSTVWTG--VTSGPISvVagNTAL 1879 Vibrio corall...
WP_061004509 2512 LPTV-SNT-VFNPIHADN--LKSVEVKVDFSASVSDVKATLLTAPV---SWI-SGqgSDKWVG--NVVVPAS-S--DDRL 2578 Vibrio sp. CL3
WP_061004509 3104 KPTL-TSV-VSNPTSGKT--GDKIGVTATFSVAVNNATAKLGSSDV---TWT-SGqdTAIWVG--EVDIPNS-SaaDTEF 3172 Vibrio sp. CL3
WP_065742252 1589 EPKV-NGI-TVNSGNPIId-NQTAFVSLTFSERVENVVANVDGVDV--TFTS-RDaaKTVWEGttSEVVALNaN--EMFK 1660 Vibrio corall...
WP_065742252 1991 EPKV-NGI-TVNSGDPIId-NQTAFVSLTFSERVENVVANVDGVDV--TFTS-RDaaKTVWEGttSEVVALNaN--EMFK 2062 Vibrio corall...
WP_065742252 2393 EPKV--NG-ITVNSGDPIvdDQTAFVSLTFSERVENVVANVDGVDV--TFIS-RDaaKTVWEGttSGVVTLN-An-EMFK 2464 Vibrio corall...
WP_065742252 2801 PPNV-TRVeSLTPSEPEF--DSTVGLTINFDEPVKELSGTFAGVPMkfTKVGmIGelSDQWMAetESEIDLTaG--SATE 2875 Vibrio corall...
WP_065742252 2666 AVVNRGYQDLSGN-EAGsDKETATGVKPVLSLDTV---EDnnqIDSQEAEHVVIHGTGIGFAGDSQMITVtVTSQKESSf 2741 Vibrio corall...
WP_012535454 2574 TLVVSEFTDSYGNvGEA-DNSGVLYLTPSITINPIs-gGV---INENDASSVVISGTTTRFEAGKEITVEfSNSVDAKS- 2647 Aliivibrio fi...
WP_012535454 2771 TYTVKGFSDTNGNlGDE-STSGVVFLTPSITVDPIs-gGV---INSSDITNVVVSGDSSRFDNSQKVTLV--LSNNVDAq 2843 Aliivibrio fi...
WP_043010840 1880 TFDLTAYQDVAGNsATH-QTTHT--VKPVVAFDMP---GT---LNTSGLKTVEVKGTAIGFASSDKVTVE-VFDGSTKL- 1948 Vibrio corall...
WP_061004509 2579 ILMVSEFTDTYGNvGEA-DNSGVLYLTPSITVTPIt-gGV---INESDASNVAISGTTTRFDVGKEITVAfSNSKDSSSl 2653 Vibrio sp. CL3
WP_061004509 3173 TYTVKGFSDTNGNlGDP-ITTGSVYLTPSITVNAIs-gGV---INSSDITNVVVNGGTSRFDDSQKVTLV--LSNNVDAq 3245 Vibrio sp. CL3
WP_065742252 1661 TVTVTQYQDAQGNmGQV--DSIEAPVKPVIEITKR---GDs--IGEDESSRVVISGTARGFKTGDKVTVVgRLESAPNTh 1733 Vibrio corall...
WP_065742252 2063 TVTVTEYQDAQGNsGEE--DSIEAPVKPLIEITER---GDs--IDEDESSQVVISGTARGFQAGDTVRVVaQLADDPSNy 2135 Vibrio corall...
WP_065742252 2465 TVTVTEYQDAQGNsGEE-DSSEA-PVKPVIEITKR---GDs--IGEDESSRVVISGTARGFKTGDKVTVV-GRLESAPNt 2536 Vibrio corall...
WP_065742252 2876 EFILNTFEDASGNaVVR-EYKESFFVKPLIEIASVtgdNV---IESDEISEFYITGQSKGIEHNGTLTVK-VKRNFSTK- 2949 Vibrio corall...
WP_065742252 2742 -nWQETVSISE-DGVWTTNssgQDMSDWPLGLITVEVTGLNQKGIAAEPVMNDkVSI 2796 Vibrio coralliilyticus
WP_012535454 2648 --DSVTATVGS-DGSWTATg--VNLSRWTDSTITVKARGSNQHNIAAKEVTTT-AQL 2698 Aliivibrio fischeri
WP_012535454 2844 -tKTTEATIQG-DGSWSMAg--QDLTGWPDSVVTATITGSNQHGIAAEAVTET-AQL 2895 Aliivibrio fischeri
WP_043010840 1949 ----SSDELEIsGGTWSVT---KDWESVSSAELKLIVSGSNNQSGDESERKQA-TSV 1997 Vibrio coralliilyticus
WP_061004509 2654 --PTVTATVDS-DGNWTAAs--ANLSSWIDGTITISATGSNQHNIAAKEAKTT-AQL 2704 Vibrio sp. CL3
WP_061004509 3246 -tKNAEANIQG-DGSWSMAa--QDLSGWPDGEVTATVTGSNQHGIAAEAVTET-ATL 3297 Vibrio sp. CL3
WP_065742252 1734 -yFNETVDVAG-SGTWNTPe--QNIRDWPSGDINLTVIGQNNNGVAADNAKDT-ITY 1785 Vibrio coralliilyticus
WP_065742252 2136 -nFDETRVVAE-DGAWATSe--QNIRDWPSGDINLTVVGQNNNGVAADSAKDT-INY 2187 Vibrio coralliilyticus
WP_065742252 2537 hyFNETVDVAG-SGTWNTPe--QNIRDWPSGDINLTVIGQNNNGVAADNAKDT-ITY 2589 Vibrio coralliilyticus
WP_065742252 2950 --LDEVVTVES-DGSWSTGk--INASSWNTGNFNVQVTGKNNGNVSANEATQT-ITV 3000 Vibrio coralliilyticus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap