3OQV


Conserved Protein Domain Family
tRNA_cyclodipep

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TIGR04539: tRNA_cyclodipep 
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tRNA-dependent cyclodipeptide synthase
Members of this family take two aminoacylated tRNA molecules and produce a cyclic dipeptide with two peptide bonds. This enzyme therefore produces a type of nonribosomal peptide, but by a mechanism entirely different from the typical non-ribosomal peptide synthase (NRPS) that relies on adenylation to activate amino acids. Three characterized members of this family are the cyclodityrosine synthase of Mycobacterium tuberculosis (an essential gene), a cyclo(L-Phe-L-Leu) synthase from Streptomyces noursei involved in natural product biosynthesis, and cyclodileucine synthase YvmC from Bacillus licheniformis. Many cyclodipeptide synthases are found next to a cytochrome P450 that further modifies the product.
Statistics
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PSSM-Id: 275332
Aligned: 45 rows
Threshold Bit Score: 184.347
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3OQV_A        13 MREEILGDRSRLIRQRGEHALI-GISAGNSYFSQKNTVMLLQWAGQRFERTDVVYVDT-HIDEMLIADGRSAQEAERSVK 90  Streptomyces no...
WP_003219776  13 FTAESLTQNCREIFERRRHVLV-GISPFNSRFSEDYIYRLIGWATAEFKSVSVLLAGH-EAANLLEALGTPRGKAERKVR 90  Bacillus subtilis
WP_013659485  27 FSIHGETSRCNTIIAKGEHVFV-GISPFNSRFSKEYIRAIIEWAQINFLQVDILLPSTeEASRLLVATGYSTEKAKKKTA 105 Marinomonas med...
WP_000180149  13 FNSHPLSSNCAEIFKRSNHALI-GISPFNSRFSDEYINRLIKWALHTFDGVSVLLAGK-EAANLLEALGTPKGKAERKVR 90  Bacillus thurin...
WP_010314882   9 MRHEPATEESARIFQRRRHALV-GTALFNSYFKQARLDELLRWAVTEFESVHVFLPDT-TTAFTMQARGYPAVEAERKTR 86  Saccharopolyspo...
WP_018694280  19 MQVHCESPQCERIYQNGEAAVI-GISPFNSYFSEQRIAALYAWSRAQFKHTWLYIPDE-PTKYTLIAQGYDEKKAISKSK 96  Algicola sagami...
WP_002492512   4 FKVDFLTKNCKQIYQRKRHVIL-GISPFTSKYNELYIRKVIQWANLNFDDFSILLAGE-ESKNLLECLGYSTSKANQKVR 81  Staphylococcus ...
WP_015445053   8 VTPHLITSLSATLYQQKEHVLL-GISPFNSYFSEEMIGDWIQWAHTTFSSFHVFIPDT-LPIYTFLALGYDELNAKKKAK 85  Legionella pneu...
WP_003158562  21 AKIAFVSPHTRRNSFEDEPKCFlGVSLENRNFTPNRFHSMVEWAARRFEKCSILIGDHiHRITLQSTRDMPEEDARREAV 100 Pseudomonas aer...
WP_020405158  20 ARVDRVSPKQRREDANAFLACFlGISLGNSKFNPPKISAILNWISRRSRNCTVLVGDSiHRITLELSQGLHPDDAYERAI 99  Hahella ganghwe...
3OQV_A        91 RTLKDLRRRLRRSLe--sVGDHAERFR---VRSLSELQETPEYRAVRERTDRAFEEDAEFATACEDMVRAVVMNRPG--D 163 Streptomyces no...
WP_003219776  91 KEVSRNRRFAERALa--aHGGDTKA-----IHTFSDFAENKAYQLMRQEVEHAFFDQPHFRHACLDMSREAMIGRARgiS 163 Bacillus subtilis
WP_013659485 106 RELRRLNKYVEEALs--rS-LIFEGIR---VIDFSHYLLVPEYIELKDNVEKAFEEDSCFRESCLQMSRQALLGRLKgvG 179 Marinomonas med...
WP_000180149  91 KEVSRNRRSAEKALi--eHGGDVNA-----IYTFSDFNDNNAYNCMRAEAEHNFLNETHFRNACLEMSHAAILGRARgtN 163 Bacillus thurin...
WP_010314882  87 REARRLRGKICGSLa--mLGVASPEQM---IIDFAWLNENEEYLRTRDEVAEVFGADEDFRKACLAESESVARSRRR--T 159 Saccharopolyspo...
WP_018694280  97 RQCQYLKNKINRAVd-----LSHEQVT---LVDSAWLENSTGYQEKYSEILSLFESNDDFREGCLASSHAILKKPLT--G 166 Algicola sagami...
WP_002492512  82 KEIKRQIRFCEDAI------LKCNKTItnrIHRFSDFRQHISYIEMYENIVNQFYTDSNFKNSCLKMSFQAIKSKAKnlN 155 Staphylococcus ...
WP_015445053  86 KQAAYLKNKVARALvqrqLDHIDTNKL---IIDMDYLENNQAYLELKKACYALYNENPEFQKECDQCTGWVLNGHAV--- 159 Legionella pneu...
WP_003158562 101 RLGDAFMEESRLIV------DAYRHATdfqYITCSEIQASTECKDFYSSLRNYFLEHSGFRDSVEKFGRNYHRHNWEklS 174 Pseudomonas aer...
WP_020405158 100 HMGNDFVEKLNPLF------ASYNDKLnfrFLKCSEVQEWPSYKNHYDQLCNLVNNDRRLLASLETFSASYHKRRNItpK 173 Hahella ganghwe...
3OQV_A       164 GVG--ISAEHLRAGLNYVLAEAPLFADSPGVFSVPSSVLCYHIDTPITAFLSRRETGFRAA-EGQAYVVVRP 232 Streptomyces noursei
WP_003219776 164 LMMeeVSEDMLNLAVEYVIAELPFFIGAPDILEVEETLLAYHRPWKLGEKISNQEFSIRMR-PNQGYLIVQE 234 Bacillus subtilis
WP_013659485 180 KGEqdLSEKDINIALPYIFAELPFYLDTPRILNVSSSTLVYHRPWPIGKGLYAGEFNLKVG-RFQSYGVIKP 250 Marinomonas mediterranea
WP_000180149 164 IDIdqISNDMLNIAVEYVIAELPFFIGGAEILGTQETVLIYHKPWELGEQIVRNDFSIKMK-PNQGYLMVQE 234 Bacillus thuringiensis
WP_010314882 160 DGI--LTEEELNMAARYLLAEIPLFVNAPAILGMPETVFCYHRIEPFERDLYRGAFALKAV-PRQGWVVVES 228 Saccharopolyspora spinosa
WP_018694280 167 HTP--VTKSALDIAVKYFLAELPIFLSSAEIFEQTSAVFCYHDHPTFLKNLF-RTKSWDLVsEQQGLVTLKP 235 Algicola sagamiensis
WP_002492512 156 TSIe-MTHESLEYAAQYVLAELPFFLNANPIINTQETLMAYHAPWELGTSIINDKFNLKMN-EKQGYIILTD 225 Staphylococcus lugdunensis
WP_015445053 160 -KD--SHRANNNIAVQYILNEMPLFMDTPSILNTPSSLFSYHQTPQFINYLYTDHRENKFVaLNQGYIELSV 228 Legionella pneumophila
WP_003158562 175 EE---QQRHRLDFSSRYFLEEFSVF---ACLVRKGFKVMAYPGAFSTLAEIAAGDFPGMLD-ELQKLTVVSL 239 Pseudomonas aeruginosa
WP_020405158 174 DV---AYRCLVDRSIDYFIEEFAIF---ACLKERGLSVFIYPGTFGTLTEIVNGEHPKAPQ-ALRNLTIISL 238 Hahella ganghwensis
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