1KH3,4U7J,6XNQ,1KP3,1VL2


Conserved Protein Domain Family
ASS

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cd01999: ASS 
argininosuccinate_synthase (ASS)
Argininosuccinate synthase (ASS; EC 6.3.4.5) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate. In humans, a defect in the ASS gene causes citrullinemia, a genetic disease characterized by severe vomiting spells and mental retardation. ASS is a homotetrameric enzyme of about 400 amino-acid residues. An arginine residue seems to be important for the enzyme's catalytic mechanism. The sequences of ASS from various prokaryotes, archaeabacteria and eukaryotes show significant similarity.
Statistics
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PSSM-Id: 467503
Aligned: 61 rows
Threshold Bit Score: 341.823
Created: 19-Nov-2004
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 30 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1KH3: Thermus thermophilus argininosuccinate synthetase binds ANP, arginine, aspartate, and Mg, contacts at 4A
  • Comment:ANP is a inhibitor, structurally similar to ATP
  • Structure:1KP3: Escherichia coli argininosuccinate synthetase binds ATP and citrulline, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ### ####                  ###                                              
1KH3_D          1 MKIVLAYSGGLDTSIILKWLKETy-RAEVIAFTADIGQGEEve--eAREKALRTGaSKAIALDLKEEFVrDFVFPMMRAG 77   Thermus therm...
6XNQ_A         14 KKIALAYSGGLDTSIMIPWLKEHyeHAEVIAVICDLGQQEDld--aIKNKALKSGaSKAYVVDVKNEFAtQYLWPLVKSG 91   Legionella pn...
1KP3_A         11 QRIGIAFSGGLDTSAALLWMRQK--GAVPYAYTANLGQPDEedydaIPRRAMEYGaENARLIDCRKQLV-AEGIAAIQCG 87   Escherichia coli
P59607         12 EKVGIAFSGGLDTSAALLWMKQK--GARCYAYTANLGQPDEadyneIPRKAQEFGaEKAVLVDCRTQLV-HEGIAAIQSG 88   Bradyrhizobiu...
XP_845050    1463 HKVGLCINPTMDSKVLAIRMREE--KIDLTCFHASLGGSVTss--eAFAEEFRSLkVPVEVVDLRNEMA-ELAFDMVMAL 1537 Trypanosoma b...
EPY30951      216 HKVGLMITNNNDSKVLALRLHQE--GLDVTCFHAYLGGQDIt----NFEAAFQNFnVPVEVVDLRSEIA-EGAFDLIMAQ 288  Strigomonas c...
WP_007279846    9 KKIGICVSGGLDSKTVTKRLMEE--GLDVVCFSADLGQPDEkdindIVKKMEPCG-APTYIVDVKDDMA-EICFETIKAS 84   Lentisphaera ...
Q8EK28         11 KKVVLAYSGGLDTSAIIPWLKENydNCEIIAFCADVGQGEEel-igLTEKALASGaSECHIVDLKEEFVkDYIYPTMATG 89   Shewanella on...
Q63U95          4 KHILLAYSGGLDTSTALHFLKRHf-DCRVTAYCANLGQKEDwe--rMKRRAAIAGaDELVIEDLRETFIgDFVFPALKAN 80   Burkholderia ...
Q8P8J4          4 KDIVLAFSGGLDTSFCIPYLQER--GYAVHTVFADTGGVDAeerdfIEKRAAELGaASHVTVDGGPAIWeGFVKPFVWAG 81   Xanthomonas c...
Feature 1                   #   ##  #                    ####  ###  ##                            
1KH3_D         78 AVYEGy----YLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELtayALKPDIKVIAPWREWSf----QG 149  Thermus therm...
6XNQ_A         92 ALYED-----QYILGTISRPLIAQKLVEIALTEQVNAVAHGATGKGNDQVRFEYsikALAPQLEIIAPWRTWDi----KS 162  Legionella pn...
1KP3_A         88 AFHNTtggltYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRyglLTNAELQIYKPWLDTDfidelGG 167  Escherichia coli
P59607         89 AFHIStggitYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTFKGNDIERFYRyglLTNPSLRIYKPWLDQQfidelGG 168  Bradyrhizobiu...
XP_845050    1538 IAEEDn----RWHLPALAEHVIGVHLLTAMQERGVTVVAQCSSQGRKGMNFERYa-rMLQPKMGVYSPWRDQRmlsdfPT 1612 Trypanosoma b...
EPY30951      289 SIDENk----NWHLYKLSWHIFGKHLLQVMRERHMTVVAQSSKQNKKEAGFEKYv-qMYEPKMGVYNAWRDSRlledfST 363  Strigomonas c...
WP_007279846   85 ATYDGg----YWNTTGIARAVTVRGIIREMQKHGVDVLCHGATGRGNDQMRFERytrALAPEMGVYAPWRDPElleqfPG 160  Lentisphaera ...
Q8EK28         90 AIYEGt----YLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGcfaALAPDLKVIAPWREWTm----QS 161  Shewanella on...
Q63U95         81 ASYERd----YLLGTPLARPAIVKGLIEYARKHDVDCLSHGCTQKGNDQVRFEMaakILAPDLPTVAPWRIWSl----QS 152  Burkholderia ...
Q8P8J4         82 EGYQG-----QYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDLa-vKALGDYQIVAPIREIQke-htQT 154  Xanthomonas c...
Feature 1                                # #      # #                                             
1KH3_D        150 RKEMIAYAEAHGIPVPvtqEKPYSMDANLLHISYEGGVLEDPwa-----ePPKGMFRMTQDPeeapdaPEYVEVEFFEGD 224  Thermus therm...
6XNQ_A        163 RQEAIVYAKAHGIEVPvtpKAPYSRDHNIWYISHEGGVLEDPsq-----eMPNDVLLMTAPVsqtpdeEEVVVLDFKKGV 237  Legionella pn...
1KP3_A        168 RHEMSEFMIACGFDYKmsvEKAYSTDSNMLGATHEAKDLEYLnssvkivnPIMGVKFWDESVki---pAEEVTVRFEQGH 244  Escherichia coli
P59607        169 RAEMSAFMTAQGFAYKmsaEKAYSTDSNLLGATHEAKDLESLdsgikivnPIMGVPFWREDCnv---kAEKVVVRFEEGQ 245  Bradyrhizobiu...
XP_845050    1613 EAEKINFLEKHEVKVQ---SAAMETHSSICGITCGLGGEVAT--------PTPRMVLPVSKCp-----ATPEFCSIAFRA 1676 Trypanosoma b...
EPY30951      364 EADQIAYLRQHGIKAVv--KGSGLVHSSVCGNTYNCEDVRTL--------PPAVLVKPLRDCs-----DKPEFVSLTFRG 428  Strigomonas c...
WP_007279846  161 RTEMADYLAQFDIPAVigmKKKYSTDANLAGLSHEAEDLEELetsclivePTMGVWPADAPDk-----IEDVTLTFQHGY 235  Lentisphaera ...
Q8EK28        162 REDLLAYLAERNIKTSasaTKIYSRDANAFHISHEGGELEDPwn-----ePSKGVWTLTADPedapnqAEYVSLEVENGR 236  Shewanella on...
Q63U95        153 REDLFAYCQQHGIPVEsrpDNLLSHDENLVHITTEGDYLESVan----afDWRDANWITPPTqap-daIETITLGFRRGV 227  Burkholderia ...
Q8P8J4        155 RAYEQKYLEERGFGVRa-kQKAYTINENLLGVTMSGGEIDRWe------aPGEGARGWCAPRsawpteALTVTLKFVEGE 227  Xanthomonas c...
Feature 1                                           #           #                                 
1KH3_D        225 PVAVNgerl-spaALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQ-RDMLS 302  Thermus therm...
6XNQ_A        238 PVALNgqel-spvDLLNSLNQKAGQHGIGVADIVENRLVGMKIRGIYEAPAAAVLYKAHKLLESLCLTRSTLHL-KQSLQ 315  Legionella pn...
1KP3_A        245 PVALNgktfsddvEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQ-YHAHG 323  Escherichia coli
P59607        246 PTALNgqtftdpvALFLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQ-YRISG 324  Bradyrhizobiu...
XP_845050    1677 ARCVRi-------NDVDVTPVQALQLANEIAGRNGVGLEHTQNNEMCEAPGMTLLSKALHFIYDVCFDRGNTDAfRMYSR 1749 Trypanosoma b...
EPY30951      429 GRCVNi-------NGMEVTPLLALQMANELAGRNGVGCTRTREGNMYEAPGMMLLSKGLNYLTDVCFDRPMADL-FRIYS 500  Strigomonas c...
WP_007279846  236 CTSINgekl-splQAMEKANEIAGRNGIWMKNALENRIIGTKSRGVYEAPGMELLHAGLENILQATLDRNSFKL-YKQMG 313  Lentisphaera ...
Q8EK28        237 VTKVNgeal-tpyAALMKLNAIAAPHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAIEELVLDKTSRNW-REQVG 314  Shewanella on...
Q63U95        228 PVSVDgaal-gpvELVERLNEAGARNGVGFQDIIENRINGLKVRGVFENPALTILHAAHRKLEKITLGRDVERL-RNLVS 305  Burkholderia ...
Q8P8J4        228 AVALDgkal-pgaQILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLLTAHRALEDAVLTKQQNRF-KPDVA 305  Xanthomonas c...
Feature 1                #                                                                        
1KH3_D        303 PKYAELVYYGFWYAPEREALQAYFDHVARs-VTGVARLKLYKGNVy-VVGRKA---PKSLYRQDLVSFDEag--gYDQKD 375  Thermus therm...
6XNQ_A        316 QTYANLVYEGRWFSQTKQALDAFIDVTQQh-VTGCVKLKLFKGNIi-PAGMHS---PYSLHHPELATFEEdn--vYNQKD 388  Legionella pn...
1KP3_A        324 RQLGRLLYQGRWFDSQALMLRDSLQRWVAsqITGEVTLELRRGNDysILNTVS---ENLTYKPERLTMEKgd-svFSPDD 399  Escherichia coli
P59607        325 MRLGRLLYQGRWFDSQALMLRETAQRWVAraVTGEVTLELRRGNDysILNTES---PNLTYAPERLSMEKvedaaFTPAD 401  Bradyrhizobiu...
XP_845050    1750 HVSSMLSSRGFVERQTLSSLEAIRHLTAD--VDGVVDVEVNRGEVi-FLKVSHvsrPVKLRLTKIMTDEE-----LEEVF 1821 Trypanosoma b...
EPY30951      501 RHVSQQIAIGQFSEKHTQSAVEAIRFLMSe-VSGVVELELHQGDVi-FLKLSHvskALDRRGGPVVTEEE-----LEEVF 573  Strigomonas c...
WP_007279846  314 ELISNLVYDGRYYDKTVQAARAAIDTLTEs-AEGEVKLGLYKGNVf-FQSMTDi--YASLYNEEDSSMEAsd--gLNPAS 387  Lentisphaera ...
Q8EK28        315 AQMAHLVYDGRWFTPLCKSLLAASESLAEs-VNGEVVVKLYKGHAi-AVKKRS---PNSLYSEAFATFGEdq--vYDQKH 387  Shewanella on...
Q63U95        306 DDYGDIVYRGLWFSDERLCLQALIDESQKy-VSGDVKVQLYKGSCt-PCAVES---EQSLYSRELVTLHAgr--aISGED 378  Burkholderia ...
Q8P8J4        306 RKWVELVYEGFYHDPLKTDIEAFLKSSQSk-VNGEVTLETRGGRVd-AVAVRS---PHLLNAKGATYAQSa---dWGVEE 377  Xanthomonas c...
Feature 1                    
1KH3_D        376 AEGFIKIQALR 386  Thermus thermophilus
6XNQ_A        389 AEGFINLFSLS 399  Legionella pneumophila subsp. pneumophila str. Philadelphia 1
1KP3_A        400 RIGQLTMRNLD 410  Escherichia coli
P59607        402 RIGQLTMRNLD 412  Bradyrhizobium diazoefficiens USDA 110
XP_845050    1822 QPGDGTFGDVQ 1832 Trypanosoma brucei brucei TREU927
EPY30951      574 QPGNGSFSDVQ 584  Strigomonas culicis
WP_007279846  388 SQGYADIISVE 398  Lentisphaera araneosa
Q8EK28        388 AEGFIRLYSLA 398  Shewanella oneidensis MR-1
Q63U95        379 ATGFLNTLGLR 389  Burkholderia pseudomallei K96243
Q8P8J4        378 AEGFIKLFGMS 388  Xanthomonas campestris pv. campestris str. ATCC 33913

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