Conserved Protein Domain Family
YgbA_NO

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pfam11756: YgbA_NO 
Nitrous oxide-stimulated promoter
The function of ygaB is not known but it is a promoter that is stimulated by the presence of nitrous oxide. It is regulated by the gene-product of the bacterial nsrR gene.
Statistics
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PSSM-Id: 432053
Aligned: 43 rows
Threshold Bit Score: 146.583
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EEC58095       7 KKRLREQKVVGQMIALYCRKN-HNTDygmkngashdmshntdgigGKLCDECSALYEYAAQRSRMCPFMEKKTFCSNCTV 85 
Q5DYZ2         9 GKLNTEFKTVSAMIEIYCKKH-HNAT--------------------HLCEECQQLMDYAEVRLDRCPYGENKPTCNTCPI 67  Aliivibrio fisc...
WP_022561209  10 GKLNTEFKTVSAMIEIYCKAH-HPQP----------------------CSDCHSLENYAETRLDRCPYGEDKPTCNCCPI 66  Vibrio nigripul...
Q87HI7         7 GKLATEFKTVKAMVEVYCHDH-HGTK-------------------DALCSECRELLEYAEVRLDRCPYGEEKPTCNKCPI 66  Vibrio parahaem...
Q8EJY2         9 GKLRYEHQTISAMAKIYCQAK-HQEQt-----------------eSGLCTDCVALLDYAAVRLDRCPYGQEKPTCNKCPV 70  Shewanella onei...
Q088P9         9 GKLLYEFRTMQAMVEIYCKAH-HPLKp-----------------sQGVCLQCSEFLSYANTRLDRCPYGQDKPTCNKCPV 70  Shewanella frig...
BAJ03940       9 GKLLREYQTIAAMVEIYCKAHkHDAKp------------------MSACPECLEFLAYAHTKLDRCPYGQDKPSCKKCPV 70 
WP_015465311   6 GRLGVEFKTIRAMVNIYCHNK-HPAK--------------------ETCAECQAFLSYANEKLDRCPYGQNKPTCNKCPI 64  Psychromonas sp...
WP_011770604   8 GKLGLEFKTIKAMVAIYCQKH-HSSTalm-------------sgqKTLCACYAEFILYANEKLDRCPYGQNKPTCNKCPI 73  Psychromonas in...
WP_011761433   9 GNLGREFATICAMVAIYCRDH-HGGK--------------------TPCTECQAFMEYAKTRLDRCPYGQEKPTCNKCPV 67  Shewanella amaz...
EEC58095      86 HCYKPEMRERIKKVMKFSGPRMLLYHPFMAVWHVVSSRLEKKKDK 130
Q5DYZ2        68 HCYKPEPKEQMRLVMRFSGPRMLLHHPILAIRHLLSEKRTVVDKP 112 Aliivibrio fischeri ES114
WP_022561209  67 HCYKPEPKEKMRIIMRYSGPRMLLYHPILAIRHLIHEKREVPDLP 111 Vibrio nigripulchritudo
Q87HI7        67 HCYKPEPKEQMRLVMRYSGPRMLLKHPILAVRHLLHEKREVPEKP 111 Vibrio parahaemolyticus
Q8EJY2        71 HCYKPAQKAQVKQIMIFAGPRMLLPHPIRAIKHLLAERHPVPTSV 115 Shewanella oneidensis
Q088P9        71 HCYKPHMKQRAREIMMYAGPRMLLPHPIFAIKHLLAERKPAPGLP 115 Shewanella frigidimarina NCIMB 400
BAJ03940      71 HCYKPQMKDKAREIMVFAGPKMLFPHPIMAIRHLLSARDLVPNKP 115
WP_015465311  65 HCYKKEQREQARTIMRYAGPRMLLWHPILAFKHLHAEKHPIPQKI 109 Psychromonas sp. CNPT3
WP_011770604  74 HCYKTAQREQARIIMRYAGPRMLLSHPILAIKHLLAEQRPVPESI 118 Psychromonas ingrahamii
WP_011761433  68 HCYKPEPRELARQIMRYAGPRMLLPHPIMAIRHLLLERKPAPEKP 112 Shewanella amazonensis
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