6Y2P


Conserved Protein Domain Family
RnlB_antitoxin

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pfam15933: RnlB_antitoxin 
Antitoxin to bacterial toxin RNase LS or RnlA
RnlB_antitoxin, formerly known as yfjO, has been found to be the antidote protein to RNase LS or RnlA in E. coli. Bacterial toxin-antitoxin systems consist of a stable toxin and an unstable antitoxin. In this case, a novel type II system, RnlA is the stable toxin that causes inhibition of cell growth and rapidly degrades T4 late mRNAs to prevent their expression, and this is neutralized by the activity of the unstable antitoxin RnlB.
Statistics
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PSSM-Id: 406375
Aligned: 9 rows
Threshold Bit Score: 73.0968
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6Y2P_C        14 KAVVMATGFENPL-SSVNEIETKLSALlgsETTGEILFDLLCANGPEWNRFVTLEMKY-GRIMLDTAKIIDEqdVPTHIL 91  Escherichia col...
Q6AIF2        16 SVVVYSTSSYSPM-NSLGALERELGQL---GARCEVVFDLLLSNGNAKDRFYRIDFMG-KRFDRKSLEILEN--PSRELQ 88  Desulfotalea ps...
Q6LR55        11 KLVVSSVCYESPL-RNLPELAKQIQSF---DFHGEVVFDLLCVNGMSRNRFVSMFFDS--SFNRSSKKPL----TSDELE 80  Photobacterium ...
WP_004071775  17 SYIVLSTSYMSPI-EWVEELEACLMKE---EYVGNILLDLLLSNGYDRDRFYEIFFDG-KKLNFQTLLNVTK--VSEELK 89  Desulfobacter p...
1_pfamImport   1 KIILISKDMSRLQ-EYISSVENDLQIN---KTKSYVLFDLLLNNNID-DRFYKCFFDG-NKFVRDTLTKVQNseIDNEIN 74 
2_pfamImport   1 NILILMMTCDSPF-DYITEIAEQLNNK---QFKGSVIIDEMLHSGNSDERFITGYFDG-VAFDENSFRFLTVp-ARSDLR 74 
WP_004327330  15 SFLVVVLSLEMTD-YYWTALQSELAKYn--VADAEVYFDFLYRNGLK-NRFFKTKLMG-VSLLNNSLRKCK---ATQECI 86  Bacteroidales
CDF00582      15 DFLVIAISYENPI-NYF--ICNDFVPF---LSKGNIVFDLTLINGKGYNQYAFADVEK-HKIIPQSLTVSSK--VDKKIL 85 
WP_012498386  15 IYLITLLDYQTLItKSLKTLKLTLIGN-----NKKILIDAAIYSGMNEYRFIEATLTNeGTINFKNYKYVS---IDERKL 86  Metamycoplasma ...
6Y2P_C        92 SKLTFTLRNHPEYLEASVLSP 112 Escherichia coli K-12
Q6AIF2        89 KKALDFYSTNHELLDNSILSK 109 Desulfotalea psychrophila
Q6LR55        81 CAQSDFYRKNPDYLYSSVLHE 101 Photobacterium profundum
WP_004071775  90 QVSGEYYSRNSEILDNSVLTK 110 Desulfobacter postgatei
1_pfamImport  75 FLTSSYYLKNDYLFEDLFFTK 95 
2_pfamImport  75 QPMCTYLASDLDVLNYSILT- 94 
WP_004327330  87 SASDKFFTLHKDVIEHSVLSS 107 Bacteroidales
CDF00582      86 DISKKFLALNPDIIEKSILPK 106
WP_012498386  87 EFANKILKNNPLFLKTSILSN 107 Metamycoplasma arthritidis
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