Conserved Protein Domain Family
HkD_Gipie

?
cd22230: HkD_Gipie 
Hook domain found in Gipie (GRP78-interacting protein induced by ER stress) and similar proteins
Gipie, also called coiled-coil domain-containing protein 88B (CCDC88B), or brain leucine zipper domain-containing protein, or Hook-related protein 3 (HkRP3), is a novel actin cytoskeleton-binding protein and Akt substrate that regulates cell migratory responses in various biological contexts. It acts as a positive regulator of T-cell maturation and inflammatory function. As a microtubule-binding protein, Gipie regulates lytic granule clustering and NK cell killing.
Statistics
?
PSSM-Id: 411801
Aligned: 5 rows
Threshold Bit Score: 213.924
Created: 21-Jul-2020
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
 
putative
Feature 1:putative LIC-binding interface [polypeptide binding site]
Evidence:
  • Comment:the conserved Hook domain interacts directly with the dynein light intermediate chain 1 (LIC1)
  • Comment:based on the structure evidence that Homo sapiens Hook 3 (6B9H) interacts with a dynein light intermediate.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
A6NC98         10 RDFLSGSLATWALGLAGLVgeaedsegeee----eeeeepplwleKRFLRLSDGALLLRVLGIIAPssrggprmlrgldg 85   human
KAE8607411     10 EQLMDGALITWIRSFEQTYnleygtl------------yttrdlrKEYMQLSEGDMLHFIMSMIDPrp------------ 65   tropical claw...
XP_002664526   10 EEFMGSALVTWVHLFEGIVgeeedgslfpey---mevnissqnavRQYLTLTNGVYLNEVMRIIDPnpkveqiy-hnvgd 85   zebrafish
XP_026544471   10 EEFVSGPLVTWMQTFEDLVgrstnqlp-----------qgeeeanEYFRKLVNGDFLNRIMQMIDLipsgppsp-wrddn 77   mainland tige...
Q4QRL3         10 RGFLSGSLATWALGLAGLVgeaeesaggteeeeeeeeeegalcteKRFLRLIDGALLLRVLGIIAPssrgglrmvrgrdg 89   house mouse
Feature 1                                                                       #     #  ## #    #
A6NC98         86 paaWRVWNLNHLWGRLRDFYQEELQLLILsPPPDLQTLGFDPlseEAVEQLEGVLRLLLGASVQCEHRELFIRHIQGLSL 165  human
KAE8607411     66 --yHGERDLHSLRKRLRAYYQDGLQQLILmPLPDSTLISQDQitvCSVQEMEKLLSLMLGAAVQCERREQIITGIRNLTL 143  tropical claw...
XP_002664526   86 dkiRRVQNFSILNRHLRSYYQENLQQLVLmPLPNVAVLGRDPlteGAVAELRRLLLLLLGCAVQCERKETFIQQIQCLDI 165  zebrafish
XP_026544471   78 reeERLQTLQIVFQRLQNFYRDELHQVILsPPPNLHVMVREPftaQAIQEMKKLVQLLLGSAVQCEQRDVFIGRIQSLDI 157  mainland tige...
Q4QRL3         90 paaCRMWNLCHLWGRLRDFYQEELQLLILsPPPDLQTMGCDPfseEAVDELESILRLLLGASVQCEHRELFIRHIRGLSL 169  house mouse
Feature 1           ## ##  ##  # 
A6NC98        166 EVQSELAAAIQEVTQ 180  human
KAE8607411    144 DSQINLAEKIQEMTQ 158  tropical clawed frog
XP_002664526  166 DTQAEIALCIQEVTQ 180  zebrafish
XP_026544471  158 SVQAALASAIKEVSQ 172  mainland tiger snake
Q4QRL3        170 DVQSELAGAIQEVTQ 184  house mouse

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap