Conserved Protein Domain Family
PWWP_NSD1_rpt1

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cd20161: PWWP_NSD1_rpt1 
first PWWP domain found in nuclear receptor-binding SET domain-containing protein 1 (NSD1) and similar proteins
NSD1, also called H3 Lysine-36 and H4 Lysine-20 specific histone-lysine N-methyltransferase, androgen receptor coactivator 267 kDa protein, androgen receptor-associated protein of 267 kDa, H3-K36-HMTase H4-K20-HMTase, Lysine N-methyltransferase 3B (KMT3B), or NR-binding SET domain-containing protein, is a lysine methyltransferase that preferentially methylates H3 on Lysine36 (H3-K36) and H4 on Lysine20 (H4-K20), which is primarily associated with active transcription. It plays a role in several pathologies, including but not limited to Sotos and Weaver syndromes, acute myeloid leukemia, breast cancer, neuroblastoma, and glioblastoma formation. It can alter transcription by interacting with the protein NSD1-interacting zinc finger protein 1 (NIZP1). It also mitigates caspase-1 activation by listeriolysin o (LLO) in macrophages, and requires functional LLO for the regulation of IL-1beta secretion. Moreover, NSD1 regulates RNA polymerase II (RNAP II) recruitment to bone morphogenetic protein 4 (BMP4). NSD1 contains a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-proline (PWWP) domains, five plant homeodomain (PHD) fingers, and an NSD-specific Cys-His rich domain (C5HCH). The SET domain is responsible for histone methyltransferase activity. The PWWP and PHD domains are involved in protein-protein interactions. The model corresponds to the first PWWP domain. The PWWP domain specifically recognizes DNA and histone methylated lysines.
Statistics
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PSSM-Id: 438989
Aligned: 9 rows
Threshold Bit Score: 194.229
Created: 9-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Feature 1:putative methyl-histone binding site [polypeptide binding site]
Evidence:
  • Comment:the aromatic residues form the three-walled methyl-lysine cage that directly participate in histone methylated lysine binding and recognition.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                         #  #                              #                             
Q96L73        318 PLKYEVGDLIWAKFKRRPWWPCRICSDPliNTHSKMKvsnrRPYRQYYVEAFGDPSERAWVAGKAIVMFEGrHQFEELPV 397  human
XP_683890     283 SVKYSIGDVVWAKFNRRPWWPCHVTTDPqiDVHTKMKdpsrRPCRLYFVRMFGEIVDQAWVPAKATFPFEGgDQFEKLPV 362  zebrafish
POI33647       35 PVKYEVGDLVWAKFNRRPWWPCTICHDPvlDCHSKMKvsnrRPYREYYVDPLGEPSEKAWVAGKAIVLFEGrHQFEELPV 114  Chinese bambo...
XP_005992408  322 PVKYKVGDLVWAKLNRRPWWPCRVCSDPllDTHSKMKvpsrRPCRQYYVQNVGDLSDQAWVAGKATVLFEGrHQFEELPV 401  coelacanth
XP_018111594  312 PVRYDEGDVVWAKFSRRPWWPCRICANSetKGKSQRKafskRPPRNYFVETLGELTEKIWVPAKALVPYRGaHQFEGLPD 391  African clawe...
XP_007908405   90 PVRFEVGDLIWAKFSRRPWWPGTVCLDPllKIHTKMKdpsrRPCRQYHVQFFGIVTEHAWVASAVVEPFEGrHQYELLVQ 169  elephant shark
XP_018407886  314 SVVYEEGDIVWAKFSRRPWWPCKICAIP--PQEEKGAst-tKSPRRYYVETLGELTEKIWVTAKAVVPFKGvYQFEELPD 390  Nanorana parkeri
XP_030068161  285 PVKHEVGDLVWAKFSRRPWWPSRICYDPilDTHSKMKasnrRPYREYHLEMLGTSSEKAWVSGKSIIPYEGkHQFEDLPD 364  Microcaecilia...
XP_020777656  256 SSKLLEGDVVWAKFNKRPWWPSQIICHPiqRVHTKMKvpspRPCRMYYLQTIGEVVECAWIPETVVIPFESgHQFEDNLV 335  great blue-sp...
Feature 1                                             
Q96L73        398 LRRrgKQKEKGYRHKVPQKILSKWEASVGLAEQYDV 433  human
XP_683890     363 LRRrgRQKEKDYKYTVPKRLIPSWKASVLEAEASLT 398  zebrafish
POI33647      115 LRRrgKQKEKGYKHKVPQRFMAKWEVSVGQAEDMLL 150  Chinese bamboo-partridge
XP_005992408  402 CRRg-KQKEKPYTYKISQKLLPVWEMSVKIAEDAFS 436  coelacanth
XP_018111594  392 LRQtqKQGDKSFKHKVPLRLLSLWQSSIEHAQDCLS 427  African clawed frog
XP_007908405  170 RNA--KNSDDVPRNKISAKVYTQWEAGLVQAEEVLS 203  elephant shark
XP_018407886  391 SKP--SPKEGCSKPKIPSKLLPLWQSSIAHAQDFLA 424  Nanorana parkeri
XP_030068161  365 LQRrgRQKEKLYKHKIPQRFLATWQVSVAYAEDFLS 400  Microcaecilia unicolor
XP_020777656  336 VKRrgKQKEKDYKYKIPKIYQSAWETSVSKAEELFH 371  great blue-spotted mudskipper

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