Conserved Protein Domain Family
DMSOR_beta_like

?
cd16368: DMSOR_beta_like 
uncharacterized subfamily of DMSO Reductase beta subunit family
This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.
Statistics
?
PSSM-Id: 319890
Aligned: 10 rows
Threshold Bit Score: 352.879
Created: 29-Jan-2014
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Fe-S cluster
Feature 1:Fe-S cluster binding site [ion binding site]
Evidence:
  • Comment:predicted based on similar proteins.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1          #      ####      ##   #   #                                         # #       
WP_003398576  44 IGSLIDLTKCDGCaaydtPLCVTACRQKNEHRFPqpq--kpiKDYWPRKKHED-WSNEKDRTDRLTPYNWTYVEKVqvnw 120 Anoxybacillus f...
WP_008409599  42 VGTFIDLSQCNGCagqsiPACVAACRAENQAKYPnpvpsqeiPYYWPNKNKKEdWQDKKHLTDRLTPYNWLFVQKVkvvh 121 Desulfotomaculu...
YP_002248525  32 YATLIDLTKCDGCkdepiPRCVKACREYNKDRFPepk--kpiQPYWPRKTYED-WSDKKNKIDTLTPYNWIFVQKLnvd- 107 Thermodesulfovi...
WP_008683453  44 LTTLIDVDACDGC-----GACVRACRDRNLEGVPlpvr-qppQPYPSWIRIQD-WSGKRDVTDRLTPYNWLYLQSCtvqt 116 Desulfovibrio s...
WP_006007701  38 LAVVVDVDACTGC-----EACVQACHERAAARVPqpvs-pipASRWGRDRKPD-WWGRRNVTDRLTPYNWLYLQSCtvqt 110 Desulfovibrio p...
CAE09710      38 IASIIDLTLCDGCegeamPLCVKACREKNRSSFPepq--kpiMDYWPQKFHED-WSDKRELTSRLTPYNWTFVEKLeve- 113 Wolinella succi...
ADK85385      39 LCTVLDVGKCIGC-----EACVEACREAWQSSTPdpvs-pipQPFPARVPIED-WSKRKDVQDRLTPYNFLYVEMLavsh 111 Desulfarculus b...
ADU66284      40 YATLIDLTKCDGCpgkdmAACVSACRTANVHKFPepdp-amlKPYWPQNFYDD-WSDRRDVHDRLTPYNWLFVQHIavte 117 Desulfurispiril...
KQC10925      41 LSTLIDLSLCDGCpgrkiPACVSACKTINKDRIPqva--dpiPLPWPRKTIED-WSKKREVFNRLTPYNLIYVHKAevdw 117 Smithella sp. SDB
EGG55901      36 LITIIDLDKCDGCsdlsiPACVRACRAKNQARYPepq--kpvQPYWPQPKYED-FSNDRDNISRLTPYNWIYLQHVsvd- 111 Parasutterella ...
Feature 1                 #  ####    #   ##  ##       #         ####   ### ##                    
WP_003398576 121 ngetkEVAIPRRCMHClDAPCQKLCPFGVIEKTkHGAVKIDENFCMGGAKCRTVCPWDIPQRQAGvglylklapelaggG 200 Anoxybacillus f...
WP_008409599 122 agkeiTVSIPRRCMHCeNPPCANLCPFGAQYKTaEGVTLINKDLCLGGAKCRDVCPWGIPARQAGvglymkmaprylgaG 201 Desulfotomaculu...
YP_002248525 108 ---gqEINIPRRCMHCdNPPCVRECPFGALTKQpEGNSVINDKICFGGAKCRDVCPWHIPQRQAGvgiylqilpkyaggG 184 Thermodesulfovi...
WP_008683453 117 eagarKVFLPRRCMHCtNPPCANLCSTGAARQRaSGAVYIDHGSCMGDGQCDRACPWMIPRRQSGvgpylsfapryagnG 196 Desulfovibrio s...
WP_006007701 111 aqgerRVFMPRRCLQClNPPCVSLCPLGAARQRpTGAVYTETSLCFGDSQCIAVCPWHIPRLQAGvgpylhlapgylgyG 190 Desulfovibrio p...
CAE09710     114 ---gqKVFVPRRCMHCdDAPCQKLCPFGVIGKSeQGAVSIDPDFCMGGAKCRDACPWGIPQRQAGvglymklapklgggG 190 Wolinella succi...
ADK85385     112 kgqevEINIPRRCMHCrNAPCANLCPFGAARVEgNGVVHIDGDLCLGGAKCKNVCPWKIPQRQSGvglylhllpeyagnG 191 Desulfarculus b...
ADU66284     118 nghteVVHVPRRCMHCdNPPCAKLCPFGVKHKHpEGMVTIDPFLCFGGSKCKSVCPWHIPQRQAGvgiythldplpaggG 197 Desulfurispiril...
KQC10925     118 ggrekTIFVPRRCMHCdNPACATICPFSANHKNkNGAVVIDQEICFGGAKCRDVCPWGIPQRQSGvgiylhvlpeymgnG 197 Smithella sp. SDB
EGG55901     112 ---gkDIYLPRRCMQCfDAPCRKLCPFGAIDQTkQGAVKIDDRVCFGGAKCRDVCPWNIPQRQAGvgiylkvepklaggG 188 Parasutterella ...
Feature 1         # #####           #   #         #             
WP_003398576 201 VMYKCDMCaDLLEEGKSPACETAC-----PKGAIEFGPYEQIRKKAY 242 Anoxybacillus flavithermus
WP_008409599 202 VMYKCDLCyDRIKVGQKPACVEAC-----PQGAIYFGLKKEMKELAR 243 Desulfotomaculum hydrothermale
YP_002248525 185 VMYKCDLCkDKIRKGEEPACVTACrdrlkENAVFSFGERKAIYELAY 231 Thermodesulfovibrio yellowstonii DSM 11347
WP_008683453 197 QMFKCDYCqDLLAEGKPPVCIAAC-----PRQAQRIGPRKDMVRAAR 238 Desulfovibrio sp. 3_1_syn3
WP_006007701 191 QTFKCDFCeDVISDGKPPLCVAAC-----PHGAQYFGPYAEMTALAR 232 Desulfovibrio piger
CAE09710     191 VMYKCDMCkDLLAKGEKPACEVKC-----PKGAIIFGEKEAMRAEAR 232 Wolinella succinogenes
ADK85385     192 AMFKCHRClPLVRQGQTPRCIEVC-----PEKVQAIGPRQEMVAAAA 233 Desulfarculus baarsii DSM 2075
ADU66284     198 VMFKCDLCkDRLDRGEQPACLPAC-----PKDAMTFGARSEIDALAE 239 Desulfurispirillum indicum S5
KQC10925     198 VMYKCDLCvDRLAQNKLPGCIEAC-----PQKAMLIGPQSSIEKEAE 239 Smithella sp. SDB
EGG55901     189 VMYKCDFCaDLIAQGKEPACSTEC-----PKKAMLVLPISQAEEKCK 230 Parasutterella excrementihominis YIT 11859

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap