2WJM


Conserved Protein Domain Family
PsbD

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COG5719: PsbD 
Photosystem II reaction center D2, PsbD [Energy production and conversion]
Photosystem II reaction center D2, PsbD is part of the Pathway/BioSystem: Photosystem II
Statistics
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PSSM-Id: 444429
Aligned: 31 rows
Threshold Bit Score: 333.941
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2WJM_M         1 MADYqTIYTQIQARGP-HitvsgewgdndrVGkpfysywlGKIGDAQIGPIYLGASGIAAFAFGSTAILIILFNMA---- 75 
WP_014429563   1 MAML-SFEKKYRVRGGtL------------VG--------GDLFDFWVGPFYVGFFGVTTLFFSVLGTALIIWGAS---- 55 
WP_014414760   1 MAML-SFERKYRVRGGtL------------VG--------GDLFDFWVGPFYVGFFGVTTCLFASLGIALILLGTA---- 55 
WP_015281819   1 MAML-SFEKKYRVRGGtL------------IA--------GNAFDFWIGPFYVGFFGITAILFILTGIFLITIGAVyswp 59 
WP_029140432   1 MSML-SFERKYRVAGGtL------------VG--------GDLFDFWVGPFYVGFFGVTTAFFALLGTSLIVYGAA---- 55 
WP_042458396   1 MALL-SFERKYRVRGGtL------------IG--------GDLFDFWVGPFFVGFFGVTTIFFATLGTAMIFWGAA---- 55 
WP_068348983   1 MALL-SFERKYRVRGGtL------------IG--------GDLFDFWVGPFYVGFFGVTTAISALLGTMLIFAAAT---- 55 
WP_071479742   1 MALL-SFERKYRVPGGtL------------VG--------GNLFDFWVGPFYVGFFGVTTIFFAVLGTLLIFWGAV---- 55 
WP_054166376   1 MALL-SFERKYRVRGGtL------------IG--------GDLFDFWVGPFYVGFFGVTTAFFAALGTALILYGAA---- 55 
WP_114913084   1 MSML-SFEMKYRVRGGtL------------IG--------GDLFDFWVGPFYVGFFGVTTAFFASLGTALIVWGAA---- 55 
2WJM_M        76 -AEVHFDPlqffrqfFWLGLYPPKAQYG-MGIPPLHDGGWWLMAGLFMTLSLGSWWIRVYSRARALGLGTHIAWNFAAAI 153
WP_014429563  56 -QGPTWNL-------WQISIAPPDLKYG-LGVAPLMEGGLWQIITVCAIGAFVSWALREVEICRKLGMQYHVPIAFSFAI 126
WP_014414760  56 -LGPTWNP-------LRINIAPPDLSYG-LGFAPLMKGGLWQLITICAIGAFVSWALRQVEIARKLGMGLHIPFAFSFAI 126
WP_015281819  60 eVGPAPNI-------FQINIAPPDISYGlLQIPPFGEGLVWQLITICAAGAFISWALREVEIARKLGIGYHIPIAFSFAI 132
WP_029140432  56 -IGGTWNI-------WQIDIAPPAIEYG-LGLAPLREGGLWQIITVCAIGAFVSWALRQVEISRKLGMGFHIPIAFSFAI 126
WP_042458396  56 -LQGTFNP-------LKIHIAPPDLSYG-LSIAPLAEGGLWQFITLCAIGAFVSWALREVEICRKLGIGYHIPIAFGMAI 126
WP_068348983  56 -QGPTLNP-------WLISINPPPVEYG-LSLAPLAQGGYWQIITCCAVIAFSSWVLRQAEISRKLGMSYHVPIAFAVAV 126
WP_071479742  56 -LQGTWNP-------WLISINPPPLSYG-LGPAPLLEGGLWQIVTICAIGAFVSWMLREVEICRKLGMGYHVPFAFGVAI 126
WP_054166376  56 -IGPTWNI-------WQISIAPPDLSYG-LALAPLKQGGLWQLITVCALGAFCSWALREVEICRKLGIGYHVPFAFSFAI 126
WP_114913084  56 -IQGTANP-------WRISIAPPDISYG-LALAPLKSGGLWQLITICAVGAFVSWALRQAEIARKLGMGLHVPIAFSFAI 126
2WJM_M       154 FFVLCIGCIHPTLVGSWSEGVPFGIWPHIDWLTAFSIRYGNFYYCPWHGFSIGFAYGCGLLFAAHGATILAVAR------ 227
WP_014429563 127 LAYVTLVVIRPILMGAWGHGFPYGIFSHLDWVSNVGYQYLHFHYNPAHMLAITFFFTTTLAMSMHGGLILSAAN------ 200
WP_014414760 127 FAYLALVVIRPLLLGAWGHGFPYGILSHLDWVSNIGYQFLHFHYNPAHMIGITFFFTNCMALAMHGSIILSASN------ 200
WP_015281819 133 FAYLAATVIRPILLGSWGHGLTYGILGHLDWTNNIGFQQLNYHYHPGHMLAISFFFASAFALSLHGGIILSVTN------ 206
WP_029140432 127 FAYLSLEVFRPIMLGAWGHAFPYGIFSHLDWVSNVGYQGLHFHYNPAHMLAVTFFFGTTLMLAMHGGVILSAVN------ 200
WP_042458396 127 FAYLTLEVFRPMLMGAWGHAFPYGIFTHLDWVSNTGYHYLHFHYNPFHMLGVSLFFATCLALALHGGLILSACN------ 200
WP_068348983 127 FAYVSLNVIRPLWMGAWGNGFPYGIWTHLEWVSNVGYAFGNFHYNPVHMLAITFFFTNCLALALHGGLVLSAVN------ 200
WP_071479742 127 FAYLTLVVFRPILMGAWGHAFPYGIWTHLDWVSNVGYTYGNFHYNPAHMIAVTFFFTTTLALALHGALVLSAAN------ 200
WP_054166376 127 FAYATLVVFRPLLLGAWGNGFPYGIFSHLDWVSNVGYQYLHFHYNPAHMIAVSFFFTTTLALSLHGGLILSAANpgasld 206
WP_114913084 127 FAYVSLVVIRPLLLGAWGHGFPYGIISHLDWVSNTGYQYLHFHYNPAHMIAITFFFTNVLALALHSSLVLSALN------ 200
2WJM_M       228 -FG-GDREIEqitdrgtAVERAALFWRWTIGFNATIESVHRWGWFFSLMVMVSASVGILLTGTFVD----NWYLWCVKHG 301
WP_014429563 201 -PK-KGEPMK-------TTDHEDTFFRDAVGYSIGSLGIHRLGLFLALSAAFWSAVCIVISGPFWTrgwpEWWGWWLNLP 271
WP_014414760 201 -PG-KGEKVK-------GSEHENTFFRDVVGYSIGTLGIHRLGVFLAISAAFWSAVCIILSGPFWTrgwpEWWNWWLQFP 271
WP_015281819 207 -PK-KGEVVK-------TAEHENTFFRDVLGYSVGALGIHRLGLFLALSAGFWCAVLDFTTGTFWTrpwpEWWTWWLKFP 277
WP_029140432 201 -PP-EGEDVK-------HGQHENQYFRDTIAYSIGPLGIHRLGWFAAINAGFWSAICILISGPFWVsgwpYFYDWYLQLP 271
WP_042458396 201 -PE-KGEEAK-------TPDHEDSFFRDLIGYSIGTLGIHRAGWLLAINAVFFSAVCIIISGPLWTegwpEWWTWWSNLP 271
WP_068348983 201 -PT-RGTDVK-------TPEYEDTYFRDFIGYSVGTLGIHRVGLFLALNAGFWSAICIVISGTLYVgswiEFWDFWKKIP 271
WP_071479742 201 -PAkKGDTMK-------TPDHEDTFFRDLIGYSVGTLGIHRLGLLLALNAGFWSAVCIVISGTIWFdqwvFWWDWWLDLP 272
WP_054166376 207 ePG-KQAEVK-------TPEYEDTFFRDIIGYSIGTLGIHRLGLVLALNAGFWSAVCIIISGPFWNkgwpQWWSWWLELP 278
WP_114913084 201 -PG-RGETVK-------TAEHENTFYRDFIGYSIGTLGIHRLGMFLAVSASFWSAICIIISGPFWTrgwpEWWSWWLNLP 271
2WJM_M       302 AapdypayLPA 312
WP_014429563 272 I-------WSQ 275
WP_014414760 272 Ys------FVG 276
WP_015281819 278 W-------WS- 280
WP_029140432 272 F-------WND 275
WP_042458396 272 I-------WPE 275
WP_068348983 272 I-------WS- 274
WP_071479742 273 W-------WRD 276
WP_054166376 279 I-------WR- 281
WP_114913084 272 F-------WSG 275
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