1MPR,1AF6,1A0T


Conserved Protein Domain Family
Maltoporin-like

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cd01346: Maltoporin-like 
Click on image for an interactive view with Cn3D
The Maltoporin-like channels (LamB porin) form a trimeric structure which facilitate the diffusion of maltodextrins and other sugars across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an 18-strand antiparallel beta-barrel (18,22). Loop 3 folds into the core to constrict pore size. Long irregular loops are found on the extracelllular side, while short turns are in the periplasm.Tightly-bound water molecules are found in the eyelet of the passage, and only substrates that can displace and replace the broken hydrogen bonds are likely to enter the pore. In the MPR structure, loops 4,6, and 9 have the greatest mobility and are highly variable; these are postulated to attract maltodextrins.
Statistics
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PSSM-Id: 238656
Aligned: 21 rows
Threshold Bit Score: 295.44
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 46 residues -Click on image for an interactive view with Cn3D
Feature 1:trimer interface
Evidence:
  • Structure:1MPR; Salmonella Maltoporin-sucrose complex, at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #     # ###                            ###                # #   ### #         
1MPR_A        1 VDFHGYARSGIGWTGSggeqqcf--qatgaqSKYRLGNECETYAELKLGQEvwk-egDKSFYFDTNVAYSVnqqndw--- 74  Salmonella typhi...
NP_902968    53 FQFDGYLRSGFYASAGdnlpkgq-yqlggdlQHFRLGNEGDTYIEFGVGKKwtl-gnGVSWGAYVMPTIYNgk------- 123 Chromobacterium ...
NP_522842    30 LEFNGYLRMGVVSERQtdaggvnkyalgsgaELFRLGNEGDTYLEASLKKVfql-pgGITWAAAFTGTYWNglanfrg-- 106 Ralstonia solana...
ZP_00088510  26 WNYSGYYRLGFAGSADghtqscf--klpgagSKYRLGNECEEYFEPVLQHDllsfddGSTLGFYTMGQVFNdyghklrf- 102 Azotobacter vine...
AAN06916     25 LEFSGYLRSGVGSATNgrsqscf--qlpgaqTKYRLGNECEQYGELELRQDlftlddGSVLSVDGMASLYNrydrtptf- 101 Pseudomonas fluo...
ZP_00092677 147 LDFSGYSRIGLAGSDEggtqscf--rlpgapSKYRLGNECEEYAELIFDQGlldlgdGSSLGLHTMAQLYNqyghelkf- 223 Azotobacter vine...
NP_968140    43 TTFTGYLRGGSGLNMQgghmncf-gnagmpgNFLRLGNECDFYTELAMVFHhv---kPTETDPVFFKTQFRmvysslgtr 118 Bdellovibrio bac...
P26218      125 FSYNGYYRSGWGTASHgspks------waigSLGRFGNEYSGWFDLQLKQRvyn-enGKRVDAVVMMDGNVgqqystgwf 197 Escherichia coli
NP_763134    32 WEVHGYMSSNVRVVDGtttdtef--grpdykTAGTHGKSTNQVEFVVKKHSey--enGVWADYVVRTEFGNgnsyayssd 107 Vibrio vulnificu...
NP_753851   145 FSYQGYFRSGWGTGNHgspqt------yaagSLGRFGNEMSGWFDLTLNQRvyn-qdGRTANAVVTYDGNVgqqyndawf 217 Escherichia coli...
Feature 1                   ## ### #           # ### #                ##    ###                #
1MPR_A       75 ------estdpAFREANVQGKNliewLPGSTIWAGKRFYqRHDVHMIDFYYWDISG----PGAGIENIDLg-FGKLSLAA 143 Salmonella typhi...
NP_902968   124 ----------tSASQVYGYISGle-fAPNLTLWAGQRYHrIQDIHILDNWLMQDGDn---YGAGVDGISVg-QARLNLSV 188 Chromobacterium ...
NP_522842   107 ----tgdqgmyVTKEAYVTTSGya-fSPAAIFWAGKRYIeREDVHIVDHFFYSVGGptidTGVGATNIPVgeQARLGISV 181 Ralstonia solana...
ZP_00088510 103 ----sddwgytRLAQWYAEWKNmp-aLNGGNFWIGRRWYnRNNVHISDFWYWNQSG----TGFAFDKVGIggDLTLSYVF 173 Azotobacter vine...
AAN06916    102 ----qgengsaRMPQMYAQWSNmp-sLNGGSLWAGRRYYkRNDIHISDFYYWNQSA----TGGGIEDVLIg-GLKYSYAF 171 Pseudomonas fluo...
ZP_00092677 224 ----sdehgfsRLSEWYLEWKNmp-vLNGGNFWIGRRWYnRNDIHISDYFYWNQSG----TGFGFDQVAIg-DLKYSYVF 293 Azotobacter vine...
NP_968140   119 q-weasanrdtSQIEAFVKAGGf--tEIPGEFWVGKRFYrDVDLHIFDWYYYADMSg---VGAGIEGLPLg-EGRFAFAH 191 Bdellovibrio bac...
P26218      198 g-dnaggenymQFSDMYVTTKGflpfAPEADFWVGKHGApKIEIQMLDWKTQRTDAa---AGVGLENWKVg-PGKIDIAL 272 Escherichia coli
NP_763134   108 gdeavrdedgfAVKEAFVELGGi--lGEDTSIWGGQRYL-NRAAGILSGEFWKQSSg---IGAGLQTKLG--GNTAGIAY 179 Vibrio vulnificu...
NP_753851   218 --gdsanenimQFSDIYLTTRGflpfAREADFWVGKHKLpQYEIQMLDWKTLTTDVa---AGVGIENWALg-VGLFDMSL 291 Escherichia coli...
Feature 1       ####                    # #                                                     
1MPR_A      144 TRSTEAggsytfssqniydevkDTANDVFDVRLAglqt--npdgVLELGVDYGRANttdgy-----kladgASKDGWMFT 216 Salmonella typhi...
NP_902968   189 SSSGSYan------------dnATPNNARRANFQltgietnpggKLTLTGAAIGGDf-------------aIGKPGAALG 243 Chromobacterium ...
NP_522842   182 LRSGQRfsptd-------nrrdATRLNVDLYNIPvtr-----tdRLRVIGEVMHGEf-------------pGGNGGGALT 236 Ralstonia solana...
ZP_00088510 174 SRKDNQd--------------qDPYVNRHDLTLEgiat--npggELQWGVSYLQKPds------------rDAHSGWSTT 225 Azotobacter vine...
AAN06916    172 SRKDNLy--------------qKDPVNRHDFNVAgfka--npggELEFGLSFIDRAdr------------rDAHRGWALT 223 Pseudomonas fluo...
ZP_00092677 294 SRKDNQd--------------qEPYINRHDFSVSgfkt--npggELTVGLNYLQKPds------------rDAHGGWSAI 345 Azotobacter vine...
NP_968140   192 LIQADDnlnd--------tnvgRPVLNALDLRWTavps--fadqKLNFWGVYAWAAgsstd------teeyVPTNGYSLA 255 Bdellovibrio bac...
P26218      273 VREDVDdydrs------lqnkqQINTNTIDLRYKdipl--wdkaTLMVSGRYVTANesasekdnqdnngyyDWKDTWMFG 344 Escherichia coli
NP_763134   180 VMADPIdtfgdk-----hktdpRTTLSSIDLYYYgvda---gigSLDFDLKIGHQSkp------------gKDDDGFGAS 239 Vibrio vulnificu...
NP_753851   292 SRDDVDvysrd------ftrtsQMNTNSVDVRYRnipl--wddaTLSLMAKYSAPNktdqqqdnenddsyfEMKDSWMLT 363 Escherichia coli...
Feature 1                                                                                       
1MPR_A      217 AEHTQSml---kgYNKFVVQYATDAMTtqgkgqargsdgsssfteelsdgtkinyankvinnngNMWRILDHGAISLGdK 293 Salmonella typhi...
NP_902968   244 LLHNQKdflaqgvNNSLFLQTSTGHASlsgqfynld-------------------skgtaqagaRQSRVADVLDWQRG-R 303 Chromobacterium ...
NP_522842   237 FKYDSPnfplpsvTNSVWVQGSTGYASletgfgt-----------------------lnsptgtNSVRLIDSVNWQVG-R 292 Ralstonia solana...
ZP_00088510 226 LQHKQEdvl--ggFNTLAVQYGQASGTnisytgd-----------------------ttqgtgsKTWRLVEILDWQTSpR 280 Azotobacter vine...
AAN06916    224 AQHVQQdfl--ggKNKLALQYGEGPGTglgytgd-----------------------tglddsnKSYRLVEFFDWQVTpR 278 Pseudomonas fluo...
ZP_00092677 346 LQHKQKgfl-ggrANTLALQYGRGPGTglgytgd-----------------------pgldssdKSWRLVEYFDWQTTeR 401 Azotobacter vine...
NP_968140   256 TRLQGPvw---ggNNNFAILYGKGTMRgfniyadstv-----------------patdesqnraWTWRFVEDYTYDVTdR 315 Bdellovibrio bac...
P26218      345 TSLTQKfdk--ggFNEFSFLVANNSIAsnfgryagaspft-----------tfngryygdhtggTAVRLTSQGEAYIGdH 411 Escherichia coli
NP_763134   240 VTLNTSyyg-ldgWTQTAIAYGKGVMQnrgvnfgs---------------------wsggddnaESLFLTSYGVWNISdK 297 Vibrio vulnificu...
NP_753851   364 SVLRQNlqr--dtFNEFTLQVANNSYAssfasfsdasntm-----------ahgryyygdhtngIAWRLISQGEMYLTdN 430 Escherichia coli...
Feature 1                                                #                                      
1MPR_A      294 WDLMYVGMYQNIDWdnn------lgTEWWTVGVRPMYKWTPIMSTLLEVGYDNVKSqqtg-------drnNQYKITLAQQ 360 Salmonella typhi...
NP_902968   304 FGGQAVLGWQSVAPdna------gkYRDATLGGRLSYGVAANVKLLTEIGLTRRNAddq--------paqQLNKATLAVA 369 Chromobacterium ...
NP_522842   293 FGGQALAVYQRGLNehg-----sggSTGTSVGGRVSYAVTPYLKLLSEVGLTTLRVngg--------plqRLDKYTVAAA 359 Ralstonia solana...
ZP_00088510 281 FSGQFDVVYQRDIRpeg------ggQHWLSIGARPVYGLGHQFKLAVEVGHDRVRAsdg---------trTLTKITIAPT 345 Azotobacter vine...
AAN06916    279 FGGQVQAVYQKDIHpdg------adQDWLSLGVRPAYAITDQFKLVAELGHDQVQAsdg---------trKLSKFTFAPT 343 Pseudomonas fluo...
ZP_00092677 402 FGGQFGIVYQKDIRpdg------ddQRWLSIGVRPVYAFSEQFKLIAELGRDQIKApgg---------trKLTKFTIAPT 466 Azotobacter vine...
NP_968140   316 WALMFGLAAEIADSgtda----dskSQMQAIGVRPIYFVSDRFQWAFEAGYSRINNesektaggdyvgdrDLGRVTAAAQ 391 Bdellovibrio bac...
P26218      412 FIVANAIVYSFGNDiysyetgahsdFESIRAVVRPAYIWDQYNQTGVELGYFTQQNkdans----nkfneSGYKTTLFHT 487 Escherichia coli
NP_763134   298 VQLGTEATYMTALDqlfg----akgLTRYIVAARPSYKLNENVRLEATASYGHEEGdkgywgrtgddvesNILNLEVATA 373 Vibrio vulnificu...
NP_753851   431 IIMANALVYSHGEDvysyesgahsdFDSIRTVIRPAWIWNTWNQTGLELGWFKQQNktqqg----vtlneSAYKTTLWHA 506 Escherichia coli...
Feature 1       ##         # #                                               # # # #
1MPR_A      361 WQAGd-sIWSRPAIRIFATYAKWDekwgyikdgdnisryaaatnsgistnsrgdsDEWTFGAQMEIWW 427 Salmonella typhimurium
NP_902968   370 FAPNt-dFWTRPELRVYASHYNWNnaaaqanls--------------tfaaggrtHANTFGVQIEAWW 422 Chromobacterium violaceum AT...
NP_522842   360 LSSGp-gLLSRPELRIYATRVAWNdaalaaqgaq------------wgawsagrrSTNLYGIQLESWW 414 Ralstonia solanacearum GMI1000
ZP_00088510 346 WSPKgpgFLDRPEVRFYYTYAFWNkeaqraanqmspg-----salsdtgvfgsdrNGANFGIQFEHWW 408 Azotobacter vinelandii
AAN06916    344 WSPKgpeFWARPEIRLYYTYASWNeaakraanelaag-----salsdtgvfggarHGSNVGLQVEYWW 406 Pseudomonas fluorescens
ZP_00092677 467 WSPSgpgFWTRPEIRFYYTYAAWNeaaqraatamapd-----salsasgpfgsdrNGANFGVQIEHWW 529 Azotobacter vinelandii
NP_968140   392 LSVGk-sMWGRPVMRAFVSHSFWNdanqgasfig-----------nrapafsdklSGTNLGYQFEAWF 447 Bdellovibrio bacteriovorus H...
P26218      488 FKVNtsmLTSRPEIRFYATYIKALeneldgf-----------------tfednkdDQFAVGAQAEIWW 538 Escherichia coli
NP_763134   374 FSANs-dYFGRPQIKPYISYIKADdeasaki-----------------igiengkDQFVFGVHTEIWF 423 Vibrio vulnificus CMCP6
NP_753851   507 LKVGesiLGSRPEIRFYGTYINILdnelsnf-----------------kfnenskNEFMAGIQVEVWW 557 Escherichia coli CFT073

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