Conserved Protein Domain Family
7tmA_OR4N-like

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cd15937: 7tmA_OR4N-like 
olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320603
Aligned: 8 rows
Threshold Bit Score: 396.415
Created: 12-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##                ###
Q8IXE1        25 LLVFVLVLIFYLIILPGNFLIIFTIKSDPGLtaPLYFFLGNLALLDASYSFIVVPRMLVDFLs-----eKKVISYrSCIT 99  human
XP_006037770  25 LFLLGLFLLFYSLILPANVLIILTIHKDPRLgsPMYFFLANLAFLDICYCSVTPPRMLADFFs-----rRKAISYgACLA 99  Chinese alligator
XP_006037774  23 LFLFVIFLTFYVIVLPGNVLIIITIRGEPNLtsPMYFLLANLAFLDIWYSSITAPKMLVDFFs-----eRKVISFgGCIA 97  Chinese alligator
ETE60736     319 FLFCIFLLMFYVIIFPGNILIIVTILKDHQLgaPMFFFLANLALMDICYSCVTPPKMIINLLs-----gCQTISYkGCMT 393 king cobra
XP_006028259  25 LILFFLFLFFYIIILPGNILIILTILHDPHLgsPMYFFLANLAFLDICYCSVTPPKMLADFFs-----fCKAISYgGCMA 99  Chinese alligator
XP_001232111  24 SVLFFFFLLFYMIILPGNILTILTIQGDSQLgsPMYFFLANLAFLDICYCSVTPPKMLADFFs-----nPATISYnACMI 98  chicken
XP_008172618  25 LILFLLFMPLYLLILLGNVLIILTIQGDLSLgsPMYFLLAKLALLGICYCSITRPLPPPPKMlgdffyeHMTIFYvGCMA 104 western painted...
Q8NGD0        25 LVLFVIFLSFYLFILPGNILIICTIRLDPHLtsPMYFLLANLALLDIWYSSITAPKMLIDFFv-----eRKIISFgGCIA 99  human
Feature 1        ### ##  #                                            # #####                    
Q8IXE1       100 QLFFLHFLGAGEMFLLVVMAFDRYIAICRPLhYSTIMnPRACYALSLVLWLGGFIHSIVQVALIlhLPFCGPNQLDNFFC 179 human
XP_006037770 100 QLFFLHFLGGAEIFLLIGMAFDRYMAICKPLhYATVVnRGVCWALVVAAWAGGFMHSIIQVALIvpLPFCGPNKLDNFFC 179 Chinese alligator
XP_006037774  98 QLFFLHFVGAAEMFLLVVMAYDRYAAICKPLhYTSVMnRNLCTVLVLASWAGGFIHSLIQVVLIirLPFCGPNELDSFFC 177 Chinese alligator
ETE60736     394 QVFFIHFLGASEINLLISMAFDRYVAICHPLhYVTVItKPACWALVMASWAGGFTHSIIQVILIfpLPFCGPNKLDNFFC 473 king cobra
XP_006028259 100 QLFFLHFLGAAEAFLLLAMAYDRYVAIFQPLhYTIVVsWELCWILVGATWIGGLFHSAIQVALTaqLPFCGPNVLDNFFC 179 Chinese alligator
XP_001232111  99 QLLFLHSLGAAEAFLLLAMAYDRYVAICKPLhYTVLVnRTVCCVLVGASWGSGFIHGIILFALTikLPFCGPNILDNFFC 178 chicken
XP_008172618 105 QLVFLHFLGAAEMFLLMAMAYDRYMTIYMPLhYMNLViRRVCCVQAGVAWTGGFVHVAILVGLTirLPFCGPNVLDNLFC 184 western painted...
Q8NGD0       100 QLFFLHFVGASEMFLLTVMAYDRYAAICRPLhYATIMnRRLCCILVALSWMGGFIHSIIQVALIvrLPFCGPNELDSYFC 179 human
Feature 1                       #  ### ### ##                                             #  ## #
Q8IXE1       180 DVPQVIKLACtntfvVELLMVSNSGLLSLLCFLGLLASYAVILCRIreh--ssEGKSKAISTCTTHIIIIFLMFGPAIFI 257 human
XP_006037770 180 DITQLIKLACadtyiLEFIMFFNSGLATFMCFLLLLISYGALLVRLras--ssLGKSKAASTCVTHIIIVFVMFGPAIYV 257 Chinese alligator
XP_006037774 178 DITQVLKITCaetfaEELVMIFSSGLISVVCFVALLVSYAFLLSMLkks--agDSANKALSTCYSHITIVVFMFGPSIYI 255 Chinese alligator
ETE60736     474 DITQIIRLACtntyrLEIIMFINSGLITTGCFFLLLISYGALLIKVrtg--vsQGKTKASSTCITHIIIVFIMFGPAIYL 551 king cobra
XP_006028259 180 DVPQVVKLACtdtslVEILTFSNNGLVILFCFLLLLVSYSFLLLKLraq--stQRQKKVASTCITHIIIVFIMFVPAIYI 257 Chinese alligator
XP_001232111 179 DVRQLAKLACantytVELLMFLNNGVVIVLCFALLLISYTFLLLKLwtq--stKAKNRIISSCVSHIIVVFVMCGPAIYI 256 chicken
XP_008172618 185 DMHQVIRLACtatytMELLTFANNGLVILMPFLLLVISYTVLLAKLrmh--spKGKSKAATTCITHIIVIFVMFCPTIFL 262 western painted...
Q8NGD0       180 DITQVVRIACantfpEELVMICSSGLISVVCFIALLMSYAFLLALLkkhsgsgENTNRAMSTCYSHITIVVLMFGPSIYI 259 human
Feature 1        #  #   ## ###  #  ##              
Q8IXE1       258 YTCPfqAFPADKVVSLFHTVIFPLMNPVIYTLRN 291 human
XP_006037770 258 YCRPfrSFPMDKVVAVFHTVVFPLVNPMIYTLRN 291 Chinese alligator
XP_006037774 256 YARPfrAYSLDKVVSVFHTVIFPLLNPIIYTLRN 289 Chinese alligator
ETE60736     552 YCHPfhDFPFDKVVGFLHTVIFPLMNPMIYTLRN 585 king cobra
XP_006028259 258 YCQPfrTIPMEKVVAVLHTVVFPLTNPMIYTLRN 291 Chinese alligator
XP_001232111 257 YVLPfqTVPMEKVVALFHTVIFPLTNSMIYTLCN 290 chicken
XP_008172618 263 YAQPfrSFSMDKVVAVFHTVIFPLLNLMIYTLRN 296 western painted turtle
Q8NGD0       260 YARPfdSFSLDKVVSVFHTVIFPLLNPIIYTLRN 293 human

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