5Z1W


Conserved Protein Domain Family
Polycystin_dom

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pfam20519: Polycystin_dom 
Polycystin domain
This domain represents the polycystin domain from group II of Transient receptor potential (TRP) channels (TRPP) including PKD1, PKD2, PKD2L and mucolipins. The polycystin domain display a sandwich-like shape with five beta-sheets in the tilted middle layer, three alpha-helices on one side and a large loop with two short antiparallel beta-sheets on the other.
Statistics
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PSSM-Id: 466668
Aligned: 11 rows
Threshold Bit Score: 223.069
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5Z1W_D   84 SFQTISSMSDFWDFAQGPLLDSLywtkwYNNQSlgrGSHSfiyyENLLLGAPRLRQLRVRND--SCVVHEDFREDILN-- 159  house mouse
Q9U1S7  121 AFGSCTSMDNIWDWLSQVLIPGIyw-teTSNST---DNENmiyyENRLLGEPRIRMLKVTND--SCTVMKSFQREIKE-- 192  Caenorhabditis elegans
Q95V80 2213 DYHLMNDFRSFLKWADSTLLPGL-----LSENRwgaEKQS-----TLIGGGLRLRQVRVKPS--SCETHPLFVDLIND-- 2278 purple sea urchin
O08852 3703 AFLAITRSDEFWPWMSHVFLPYV-----HGNQS------------SPELGPPRLRQVRLQEA----FCPDPSSSEHM--- 3758 house mouse
Q9NTG1 1750 DLATVTKLEDIYRWLNSVLLPLL-----HNDLNptfLPES----SSKILGLPLMRQVRAKSSekMCLPAEKFVQNSIRre 1820 human
O35245  267 NFKTLSSMEDFWKFTEGSFLDGLywkaqTSNHTq-aDNRSfifyENLLLGVPRLRQLRVRNG--SCSIPQDLRDEIKE-- 341  house mouse
Q9Z0T6 1623 DLATVMKLGDIYTWLHGVFLPLL-----HNDPNptfLPDS----SSKILGLPLVRQVRARPSnkTCLLAKKFVQSSVAge 1693 house mouse
Q9W4X5  171 GLQEVYFLNQLFDFIESTLVLAF-----NSNSTesgSPGWahaeQSVLLGVMRLRQLRVSN------------------- 226  fruit fly
Q8T8Z2  171 GLSQVYFIYQVHSYMKITLVEAF-----YAQKTn-gYEGWwameQWQKIGVVRLRQMRPVD------------------- 225  fruit fly
Q9VVZ8  167 GLLSVGDVPDIYFFVVSSLVLAF-----TDGKNtsgGAPWihaeGTRLLGVVRLRQLRTES------------------- 222  fruit fly
Q9VK95  404 GNYLKDDSDSI-----------------QANMSfhhLEGRvflyENLLLGPPRLRQIRVRKE--SCYVNDAFIRYFNT-- 462  fruit fly
5Z1W_D  160 --CYDVYSPDKEDQ-----------LPFGPQNGTAWTYHS-----------QNELG-------------GSSHWGRLTSY 202  house mouse
Q9U1S7  193 --CFANYEEKLEDK-----------TMVGDGSVDAFIYAT-----------AKELE-------------NLKTVGTIASY 235  Caenorhabditis elegans
Q95V80 2279 --CRALFTPESEDRelyn---aswsQPIVNMSALLNSSQT-----------VEEWSlsnyspwhfypdkAVGMWGHATSL 2342 purple sea urchin
O08852 3759 --CSAAGSLSTSDygi-------gwQSVVQNGSETWAYSA-----------PDLL--------------GAWYWGYCAVY 3804 house mouse
Q9NTG1 1821 ihCHPKYGIDPEDTknysgfwnevdKQAIDESTNGFTYKP-----------QGTQW-------------LYYSYGLLHTY 1876 human
O35245  342 --CYDVYSVSSEDR-----------APFGPRNGTAWMYTS-----------EKELN-------------GSSHWGIIASY 384  house mouse
Q9Z0T6 1694 ihCHPQYGIDPEDTqhyssvwskagKQSTDKASHGFTYKP-----------PGKRW-------------VYHSYGVLNTY 1749 house mouse
Q9W4X5  227 --PQVGLGPPKFSDtyympdwqlpyRKLHYSDKYWRIYEPwipikmgfeflDALLM-------------NFDHVGSLNSY 291  fruit fly
Q8T8Z2  226 --CHIGLGKPEWDKktyapewrlpyHRMHYTEKFWRIYDPfvpaefepsflNGLLL-------------NYDHYGYLLNY 290  fruit fly
Q9VVZ8  223 --NRLGLSLPVFTErdfseswtlpyERVPYTDKYWPIYTPwlpsv--svarDNLLM-------------GINHVGHMFNY 285  fruit fly
Q9VK95  463 --CYAAYSSGAEDR-----------KPMHKGSP----FRT-----------MHDLD-------------STPIWTVLAFY 501  fruit fly
5Z1W_D  203 S-GGGYYL-DLP-GSRQASAEALQGLQEGLWLDRGTRVVFIDFSVYNANINLFCILRLVVEFPATGGTIPSWQIRTVKLI 279  house mouse
Q9U1S7  236 G-GGGFVQ-RLPvAGSTEAQSAIATLKANRWIDRGSRAIIVDFALYNANINLFCVVKLLFELPASGGVITTPKLMTYDLL 313  Caenorhabditis elegans
Q95V80 2343 P-SSGYIW-VLG-SMYEEAKDSLAEMVDARWLDARTRALFVEWTSYNANTNLFCVVTFLMETPASGGLLKLPEVQAVRLH 2419 purple sea urchin
O08852 3805 D-SGGYIQ-ELG-LSLEESRARLGFLQLHNWLDSRSRAVFVELTRYSPAVGLHAAVTLRLEFPVAGHALAAFSVRPFALR 3881 house mouse
Q9NTG1 1877 G-SGGYALyFFPeQQRFNSTLRLKELQESNWLDEKTWAVVLELTTFNPDINLFCSISVIFEVSQLGVVNTSISLHSFSLA 1955 human
O35245  385 S-GAGYYL-DLS-RTREETAAQLAGLRRNFWLDRGTRAAFIDFSVYNANINLFCVVRLLAEFPATGGVVPSWQFQPVKLI 461  house mouse
Q9Z0T6 1750 G-SGGYVFyFFPgQQMFNSTVRLKELEGKNWLDELTWAVIVELTTLNPDTSLMCSISVVFEVSPLGVVNSSLSVYSFSLA 1828 house mouse
Q9W4X5  292 PeLAGYVS-LLA-RSAANSMKVIDYLSENHWLTLNTSAVFIDFTLYNVDVNLFSICTLRVEKTPFGGIVPDVQVDSAKLL 369  fruit fly
Q8T8Z2  291 PeVAGYVV-LMM-STKINCLKQIEYLRDYSWLDKNTSALFIDLTMYNADANLFTLITLRVENSPFGIQLPRVHVDSVSML 368  fruit fly
Q9VVZ8  286 PeSKGYKV-LLS-DTRHKSLKIIDYLMKKNWLDANTTALFMDFSLYNADANTFTVCTLWVEKFPYQYPDGHTRIESHTFV 363  fruit fly
Q9VK95  502 R-TGGYTV-NLD-YDKDRNVKIINDLKDIHWLDRGSRLCLVEFNLFNENTDIFQSIKLIAEIPPTGGVIPQAHLQTVKMY 578  fruit fly
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