Conserved Protein Domain Family
TraH

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pfam06122: TraH 
Conjugative relaxosome accessory transposon protein
The TraH protein is thought to be a relaxosome accessory component, also necessary for transfer but not for H-pilus synthesis within the conjugative transposon.
Statistics
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PSSM-Id: 428780
Aligned: 28 rows
Threshold Bit Score: 237.627
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Thimo_0894        39 MTEMFE--TMLNYTEPTAHLGQRRGVLTGGSVNARNRIM--NESLWHVVPPSFDAGCGGIDLFAGSFSFISAEQFQNLLR 114
jcvi:cds.PERMA_A0032  26 LDKIV---GSSYYLPPGEIKSPTTNTYTLGSYSFRLRNDllNRPVLSLRPPQATFSCSGADFDAGMLSMLNLNTFGDMLS 102
WP_011078005          26 VNEMFS--GMINVTSPGAYKTATRGVITGGSVVLRNRIS--TANLISITPPSAKGGCGGINLYSGSFSFINGEEFVALMR 101 Pseudom...
jgi:Mpe_B0375         27 LQDALDgmFMSNSTAPQAFSSQSRGGFVGGSVAMRTPVR--NINLVAFDPPRLAAGCGGIDMFGGSFSFINADQLVALFR 104
mmlSJTU:KPHS_p301400  37 MDKLFN--EMSNTTPPGVYESQRRGVLAGGRFTAKTRIF--DENLVSFAPPSWKAGCGGVDLFGGSLSFINADQIVQLLR 112
jgi:Thein_1941        26 VEDWLNn-SVTSYTGPSYIEAGRRGYLSFGSVSTRTLMT--TDRLITFTPPSINFGCGGIDIFMGGFSFLDFDYLVDKFQ 102
WP_013681680          26 vSDWV---QQKTSLAPNYFKGQKRGYFTFGSFSARWQPSq-TTYLFDIQKPSLKIGCGGIDIFGGGFNFVNPQYLVQQLQ 101 Hippea ...
Q2LU06                35 VDDWL---QQKTETSPGYFEGQKRGYFTGGSFSARWQQG--NDYLFTAMPPKVKAGCGGIDVFLGGFSYLNFEYLVTKLQ 109 Syntrop...
jgi:Glov_0253         44 VDDWV---QQKSSTSPSYYEGSKRGYYTGGSFSARWANT--DDHLFTASLPKLKSGCGGIDMFLGGFSFLNVDYLVQKLQ 118
jgi:Ppro_3801         31 vDDWI---TSKQSASPSSFQGATRGYYTGGSFQAHWKDS--NDYLMTVSTPHIKSGCGGIDTFMGGFAFMDVDYLVQKLQ 105
jgi:Thimo_0894       115 AIAANAT----GYAFEVALGAMCKECLETMETLQKKVQALNQGFANSCQLAKGLVNdvADAFdMKHKDNTSL------LG 184
jcvi:cds.PERMA_A0032 103 QAGTSV-----AWGIMIGLVYSLPGIGDAFQKLNEWARMFQQLISNSCMIGTQIGK--NLGSsIWESGRTNAqg----kG 171
WP_011078005         102 NVASNAAgivsGFAFELALDAMDAQTGGVIRNLANKIQALNQMFSNSCQLASGLVTnaKKAYeESTDFKSAM------TA 175 Pseudom...
jgi:Mpe_B0375        105 QIAANSV----GLAFKAAIDYINPALGKQMQEFQAKMQALNENMRNTCAIANQVVKsfSDPSaRKDMVDGATaa---aEA 177
mmlSJTU:KPHS_p301400 113 AVAANAK----GYAFQLALDNVFPDGAKWIENFQKKVQALNQHLGNSCQLAQGFVNdlTSGMdLKHKTDASI------TA 182
jgi:Thein_1941       103 RIISAAP----AFAFEYALRSICEQCGTIVDAMNAAQDLLNSLQLNDCQASRWLGY--YLASkA-GFNPEAQkektktEA 175
WP_013681680         102 TMLQAAP----AVAFDIALKTLCEQCSQTIKSIEGMIQRLNGLQFNACKASKIMLT-----KvVDAISPDSQsserasAD 172 Hippea ...
Q2LU06               110 RIMQAAP----AAAFDIALNVLCEPCSKTIKSLEAITNTLNNLQLDECKAGRALVA--TMVPpSLAETKDKqak-lagIQ 182 Syntrop...
jgi:Glov_0253        119 NILSAAP----AAAFDIALKTLAPQVADTIKSLEAITDRLNSLQMNDCKAAKALVA--TAASpFSSVMSDSLkaemktAQ 192
jgi:Ppro_3801        106 RIMSAAP----AAAFDIALKAVSPQISGTLKELGAWADALNNLQLDDCKASKALVA--TIASpASNLLGEKMqselssAQ 179
jgi:Thimo_0894       185 MVKGL-GDVFETRSSASG-AdpiAQVRDnVPPeert----------------------------qiegNLVWQALKRKGA 234
jcvi:cds.PERMA_A0032 172 VASGSvSSFEAAQKE--------FIDLIkTTGeikk-----------------------------ffgTIPYGPLYEGGW 214
WP_011078005         176 FGSNVsSDFFTAKSTKEDs----PANRIaASGkavqc---------------------------entgNVLWCAMMKSGL 224 Pseudom...
jgi:Mpe_B0375        178 AKGGf-DDLWS------------GMTSFfTTPnsatrtada-------------------ggycaecgNPVWKALVSSNS 225
mmlSJTU:KPHS_p301400 183 TTSGLyEDFFGSKQETSG-KsplEELKAnKPDeynk-----------------------------migNIVWKQLKSNNA 232
jgi:Thein_1941       176 SKLATlAGTVRSWKDWl-----dQHLKTvAVPgqlsstenqelnr----------dcpsyindllnsgSLIHYVYQTRFS 240
WP_013681680         173 QSHNVlTGAVDLFNEIFEs---eQSITPsSKPsvnqpasaqtdydkmiadcpqdikdifaasqdnpntTILEGMAKKLNI 249 Hippea ...
Q2LU06               183 GDFLQsSGVNDLWKSIn-----dQTSANaNKPvtnmkqalagcp-------------qdirdvfgtsgSVINNIAAKTGF 244 Syntrop...
jgi:Glov_0253        193 TDFMVsSGAKDLYQDVSKlFeseQKTNAgNKPgvpgttqtsatsat--------agcptevlqvfgdgSVLENLAGKKGM 264
jgi:Ppro_3801        180 SDFWTsSGMGDLYTKVTGlFkseQKDVAsGNAstaptiqataqgsi--------agcpqeivdlygqgSFLDNIAAKKNL 251
jgi:Thimo_0894       235 AgwfaDGDDT-------LLEAMMSLTGSVIVga----pEAAPDGQGDNh-------rITYL--PGNll-----kASDLLN 289
jcvi:cds.PERMA_A0032 215 T------DTE-------TADLVASLFGVLEWr------AVDTAGNDCTdtsclknakIKVVyyPPLtn-----nLQDIIN 270
WP_011078005         225 QsqilFGSDE-------NAEFIMSMVGSYNVs-----lTNDASGGKNFaah----------pmPKLitg---egLKILVE 279 Pseudom...
jgi:Mpe_B0375        226 GvllgDPTTStdsnanrTNEIIMSLMGTVIMstt-kadTTTTGGVTQKdtgtvkpylLT---------------LFDLRD 289
mmlSJTU:KPHS_p301400 233 NtwfqYGDNT-------LLEAIMSLTGTVIIgdlvndpNSTGTGAKTTp--------LTTL--PGNki-----tLSDLIS 290
jgi:Thein_1941       241 T-----YGQE-------LEAVLRGYLGDVVF-------Y---QNNGRWm--------VNVI--PGCgsknvsnpLEVLIT 288
WP_013681680         250 Pe-------D-------YVDLIRGFVGDIRI-------VVAQNSQGKKe--------LKIVlmGPCaknd-stkTNEFYN 299 Hippea ...
Q2LU06               245 Nn------qS-------YLDMLRGFVGDVYI-------IDAGDAG--Fq--------VGHT--PPCdqnr-yasFDNLLD 291 Syntrop...
jgi:Glov_0253        265 Ss-------E-------YVKLVRGFIGDVII-------QNPATTGTTYq--------AQYI--PPCdkn---nsFDSFIS 310
jgi:Ppro_3801        252 Pt-------A-------YVELIRGFVGDVEI-------IPPATTGSTFv--------ARVV--DSCddn---asPVAFLM 297
jgi:Thimo_0894       290 Gtr--------dREdaaqwdnawshRVrlYQCgPpggpiDrSENgCLEPS--VTEDAVNGMIQRVRDVLigvrpy--gag 357
jcvi:cds.PERMA_A0032 271 Ga-----------------------TMqiYHCnWgy-dtNiGTFkCNGGVevSNKDIPEGLRQKIVNRI----------- 315
WP_011078005         280 Gst--------------------nlDVkvYQCdQ-------DDPdCSEPNi-RTLTSFKGLETRILEDLq---------- 321 Pseudom...
jgi:Mpe_B0375        290 Gss--------sGk-----------PFkiWTCsD-----GyAKHqCTQLT--ETAVTFDGMKGYVNKMLfgyadglasgv 343
mmlSJTU:KPHS_p301400 291 Gg-----------------------SVeiYSCdS-------DTTnCLSAGssNKTVVLKGIKNQITDMLlgt-------- 332
jgi:Thein_1941       289 GktlvnplktspSSpl---------------------diTlGTQqCTEYQ--SFFPNAKPLIDIIKDTL----------- 334
WP_013681680         300 Gta----------------------------------yaEnDTGeCYS-------ANTKNLIQYVQDNM----------- 327 Hippea ...
Q2LU06               292 Gsv----------------------------------yaRtAGGaCAQIT-----DSSADLTNYVRTKM----------- 321 Syntrop...
jgi:Glov_0253        311 Gsa----------------------------------qgRdTAGaCADIT-----DANKNLMVYVAGKM----------- 340
jgi:Ppro_3801        298 Ghts---------------------------------skAsPTAsCQQIT-----DTNRSLVTYSVNML----------- 328
jgi:Thimo_0894       358 tetIGLVQKFrL----GQGAITA--AEQAFMQYA--PNG----LGAGIRTLARY-DEGMARLFVEQAAPVIALEMTQVIL 424
jcvi:cds.PERMA_A0032 316 ---DGIVDDI------IDGTFMAnpDDAQWIKSV--PLPnfpeVINYLAILKKQgFTSQYNSALYGVSELISSMMLKVLI 384
WP_011078005         322 --nNGILERF-A----NGTATAAdgNRIAYLASSrvGVN----LMKITQKAGAQ----SGYDYLNQFAKKIAADASMSLI 386 Pseudom...
jgi:Mpe_B0375        344 ptaGSIIGKL-EscstTSCGFTQ--AQKDFLNSV--QTP----TLALVRKVQAV--PGASQHVATRLVDQIANEIAVKYG 412
mmlSJTU:KPHS_p301400 333 sstPGVIYKYaT----NSGTLTD--PEKAFVSNL--PGG----IGTIVRNLSVL-SQDGANLFATESSGAIALTMMYSFS 399
jgi:Thein_1941       335 ---ESAYIKT-I----NHQALTP--TEMNLMAML--PAP----VYNYIKQLYIY---DAPTFALTHISDIAAEGFAYTLL 395
WP_013681680         328 ---YKIIQKM-KdsdgSNRALSD--EEQSIIQTS--PVS----VYQALKASVIV---GDTDTVASLLSDITAKAYAYGAL 392 Hippea ...
Q2LU06               322 ---TRIAGKI-K----AKQALSD--EDNAFVNAS--PLS----IGLVLKAAVGT---NQESSIISTLSDVTAKAYAFQLL 382 Syntrop...
jgi:Glov_0253        341 ---QSIATKI-K----SKTALTA--DEEAFLKST--PLS----VGLILKNATAT---NTEGEVIGKLAELTARAYGYYML 401
jgi:Ppro_3801        329 ---TSIITKM-K----TKVAYSL--AEQDFLGSM--PPG----VYNYLRAAAST---KMESATVAELANIASNALAYYML 389
jgi:Thimo_0894       425 ND 426
jcvi:cds.PERMA_A0032 385 DN 386
WP_011078005         387 YQ 388 Pseudomonas
jgi:Mpe_B0375        413 Ea 414
mmlSJTU:KPHS_p301400 400 EE 401
jgi:Thein_1941       396 Tm 397
WP_013681680         393 SD 394 Hippea maritima
Q2LU06               383 SD 384 Syntrophus aciditrophicus SB
jgi:Glov_0253        402 LD 403
jgi:Ppro_3801        390 SD 391
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