Conserved Protein Domain Family
Phage_holin_2_3

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pfam16080: Phage_holin_2_3 
Bacteriophage holin family HP1
Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion 1,2].
Statistics
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PSSM-Id: 435124
Aligned: 11 rows
Threshold Bit Score: 64.7071
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_024910291   2 QEKSSLAAYISSGSLVVIGkigaWfndlTLNEWAIVIGIIMATVTCAANIYFQRRQTRAIEKA 64  Chania multitudinisentens
jgi:HSM_1161   7 KNSETTGAYVGSAIAIYSG----F----TLADWAAIFGILFGLFTMLINWYYKNKEIKLKETA 61 
P51727         3 SKIDSAIPFIGSLTALISG----Y----SLHEWASLFGILFGAVSVWIAYRKYKEDVQARKDE 57  Haemophilus phage HP1c1
Q2S7H4         3 DKAASAAAYASSAVATLFG----L----SLSQVVALGGLLIAAATFVMNWYYKQKHLDLAREQ 57  Hahella chejuensis KCTC 2396
WP_015874049   7 EKYATPTAYLSSLMATVLG----Ff---TLEQWVAVTGIVCTIGTFLINVYYRKKEYKLKARH 62  Candidatus Hamiltonella defensa
CCH:MU9_2613   5 DKYSGPAAYTWGLITSVLG----Vl---SLDQWAVLIGIVCTIGTFFINWYYRRKEFQIKAGD 60 
CCH:MU9_1861   5 DKYSSPTAYAWGLITSAFG----Il---SLDQWAIVAGIICTVGTFLVNWYYKRKEFQLKAGE 60 
Q7N1Q6         4 DKYTSPTAYTWGTFTAMLG----Al---SLNDWAIIIGIICTVGTFGVNWYYKHREL---SRN 56  Photorhabdus laumondii subsp. la...
WP_015873507   5 EKYTTGTAYGASATTFLCG----Al---SLSEWALVTGIICSLLTVGLNWYYRHKEYRFRTRN 60  Candidatus Hamiltonella defensa
WP_015873861   5 EKYTTGTAYGASATTFLCG----Al---SLSEWALVTGIICSVLTVGLNWYYRHKEYRYRTRN 60  Candidatus Hamiltonella defensa
Q0WF59        45 EKYTSGSSYGWGAFTVMLG----Sl---SLNEWAIVVGIACTVGTFTINWHYKRKEFQLREKA 100 Yersinia pestis
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