Conserved Protein Domain Family
YkuK

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COG1978: YkuK 
Predicted RNase H-related nuclease YkuK, DUF458 family [General function prediction only]
Statistics
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PSSM-Id: 441581
Aligned: 74 rows
Threshold Bit Score: 176.893
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015253783  13 LVFQNVSECGLSLDDVQARILSFMAKDPKAV--YHFIVGTDSQvYRGSTKFVTGIIIRRVGRGAWACYRQTiVPRELRSL 90 
WP_012788249   4 INKWRRLNGDEIQRPIADEITEMLIAEREAGndLKVCIGTDSQvKGRITEFATVIVFLRKGKGGFMYIHNF-STQRKMSI 82 
WP_013767492   1 -MSWRKFDGQRIDLPIKDAVEKTIIREKELGhkLKVCIGSDSQvRGGTVEYATVIVFLREKKGGFMYIQNS-RETRRMSL 78 
WP_008584964   5 KKQWRKLTGERVNTYIEEELHGVILREREMGsqLKVCIGTDSQvKGADTEFATAIVFIRKGRGGFMYLTNE-TTREKMSI 83 
WP_014222870   4 QQHWRKLDGTRITRPIEDEVRAVLVREKEMGhtVKVCIGTDSQvKGKETEFATVIVFVRKGKGGFMYIHNE-TTLQKMNI 82 
WP_002661078   1 -MNWRKLNGSRILLPIKEAVDKTLAKELAEGhdVKVCIGTDSQvRGKQISFATVIVFLRKGKGGFMYIKPE-LQTGQMSI 78 
WP_015362304   5 TQKWRNFSGKTYDQPITEIVHDAIQREQKAGhrIKICVGSDSQaYKNHVEYATVIVVLREGKGGFMFMRNH-KGTKKISI 83 
WP_114901345   1 MNKWRNFSGKVFNEPITTLVENAIVKEQKAGhrLKIYVGSDSQaYKTHVNYGTVIVILRKGKGGFMFIKNE-KGTTKIGL 79 
WP_119048447   2 EQQWQRLDGTAIRRPIEEEVRSVLARETAHGhqLKVCIGTDSQvRAGTTAFATVIVFLRKGKGGFMYVLSD-SSQQPMSV 80 
WP_119984279   1 -MHWRKFNGDKLQLPIKDMVEKTILAEVTKGvkLKVCIGTDSQvKGADAEFATVIVFLREHNGGFMYIQND-KISRPFHI 78 
WP_015253783  91 KEKLSYETTLSQEVASYFMGDALRkmeeivlpyiykgAALEHFIDIDAGTHptlNKTSRYVKEMIDRVEAMGvYAARVKP 170
WP_012788249  83 KERMLEEVGRSIEVAYSLCHIFTA-------------YNVDMEVHADINTNp-nFRSNDALKEAMGYIMGMG-FTFRAKP 147
WP_013767492  79 RERMIFEVSKSIEVAYALCDLLDK-------------YDVELEVHADINTDp-hFESNVALKEAMGYIVSMG-FEFKAKP 143
WP_008584964  84 RQRMITEVARSIEVAYSLSDVFTS-------------HQVDMEVHVDINTDp-mYKSHDALKEAIGYITGMG-FVFKAKP 148
WP_014222870  83 KQRMLTEVSKSIEIAYALCRLFTI-------------YNVDMEVHADINTNp-nFKSNDALKEAMGYIMGMG-FVFKAKP 147
WP_002661078  79 RERMITEVAKSVAVAYELTDIFAA-------------HGVQLEVHADISTDs-nFKSNVALKEAMGYIRGMG-YEFKAKP 143
WP_015362304  84 KERMLKEVTMSVEVAYEICDILDK-------------HDVALEVHADINTDp-kFDSNLALKDAMGYIIGMG-FVFKAKP 148
WP_114901345  80 KERMLREVALSVETAYRICDLLEK-------------YNIELEVHADINTDs-kFESNVALKEAMGYIIGMG-FAFKAKP 144
WP_119048447  81 KERMLTEVGKSIEVAYQLCGLFTN-------------YSIDMEVHADINTNp-nFKSNHALKDAMGYIMGMG-FAFRAKP 145
WP_119984279  79 KERMLLEVAKSIEVAYELCDLFIK-------------YNIVMEVHADINTSp-qFKSNDALKEAMGYILGMG-FAFKAKP 143
WP_015253783 171 ESYAASSYANRYTK 184
WP_012788249 148 HAFASTSCANKIVH 161
WP_013767492 144 DAFASSSCADKVA- 156
WP_008584964 149 EAFASSCCANKVVQ 162
WP_014222870 148 HAFASSTCANKVVQ 161
WP_002661078 144 HAFASSSCADKVV- 156
WP_015362304 149 HAFASSSCADKVV- 161
WP_114901345 145 YAFASSSCADSIV- 157
WP_119048447 146 YAFASSCCADKVV- 158
WP_119984279 144 EAFASSSCADKIVN 157
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