Conserved Protein Domain Family
SPFH_like_u2

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cd03402: SPFH_like_u2 
Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease, and in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.
Statistics
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PSSM-Id: 259800
Aligned: 48 rows
Threshold Bit Score: 243.999
Created: 4-Feb-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM36108  51 AACIFMLAGLYTLEPNQAAVLSLFGKYVGTVKDAGLRWNVPFYAKRR-VSQRVRNFESG-----RLKVNELDGSPIEIAA 124 Xanthomonas axonopo...
EEP67294  40 LPLGYGFTRFRVVQPNTALVGTLFGKYAGVLPQSGFFWLLPFYNTVS-VSLKTSNYVTA-----TLKVNDASGTPIEIAA 113 Kingella oralis ATC...
ABQ14197  38 FVLVFFLSGFKVVQPNTALVATLFGKYAGVLMEPGFFYTNPLYSIKS-ISLKTDNYITE-----TLKVNDSSGTPIEIAA 111 Dichelobacter nodos...
EEH52146 102 ICAIPLCGSCVTVYPKHAVVTTVFGRFLHAFTRPGLYFVNPCGREAQvVSLKATSVELP-----AVKVADRNGNPLVISG 176 Micromonas pusilla ...
EDQ89395  55 SFGTSCLASFFVLDVQSEAVILRFGNYERTVRKPGLHYSNVFGRSKRvISTKLQSMDLPa---kSRTVMDREGNPLVISA 131 Monosiga brevicolli...
ADG69950  32 IFPPILLFGFIIVGPREEVVVLRFGKYLTTLRSEGIRWIHPVGRSLQrISTRDTTYNLT-----TETVVEKNGNPVLISA 106 Planctomyces limnop...
EGH81618  67 LLGLILTGGFCVIEPKQAKVLVFFGKTRGVVMENGFFWMNPLLSKTS-VSLKIENFESA-----PVKVNDKTGSPIMAAA 140 Pseudomonas syringa...
EGD78189  53 SFGSTLLSSFFTVKQQNEAVILRYGRYERTIKTPGLHYSNIFGRTVLpISKQMRSMDLPdersgRRTVLDKEGNPLIVSA 132 Salpingoeca sp. ATC...
EKC96130 227 AVTAVSLGGLARGRTGWAWVQGRFGRYRGTVRRTGLVWLNPLAGRCR-MDLRPRHWRSA-----PLPAVDADGVAVEVVL 300 Streptomyces sp. SM8
EGB08754 178 CLPCTCLGSWVLVNPKEELVSIHFGEFSGVVNEPGLHYVNMWGRELRkISTAQQNLEVP-----GEKVLDAMGCPLVASA 252 Aureococcus anophag...
AAM36108 125 VIVWQVLDASEAVYNVDDYESFVHIQSEAALRAMATSYPYDqh------eDGQISLRs-HPAEISEQLKRHLDERLTQAG 197 Xanthomonas axonopo...
EEP67294 114 AIVYHIENPAAAVLDVENAHDFLQVQSEGALRVLATHHPYTn-------dGSADSLTg-HSDKILEQFRRMVQERVEIAG 185 Kingella oralis ATC...
ABQ14197 112 SIVYHIENPAAAVLDVEDPVLFLKVQSEGALRAIASHHPYSs-------rNKNEGLSe-HSEAIFENLKEMIQKQVEKAG 183 Dichelobacter nodos...
EEH52146 177 VIDYRVVDPTRAALDVLHLPNSVKVNAHAALKRVASLYPYEt-------rDGSPSLKt-EVVQLNSVLRTLLQRKVEVCG 248 Micromonas pusilla ...
EDQ89395 132 VVTYQFVDSYKAALEVENPRTFLITQGETVLKDVMGQFPYEa-------aEGVPSLRt-HSHEVSAMLRERLQALVHVSG 203 Monosiga brevicolli...
ADG69950 107 VVVYRVEDTIKAALHVTDYHRFLGDQAGAVVKRVSSLFPYEs-------sDPAIPCLkkESEIVSQAFVAELQDAVNPAG 179 Planctomyces limnop...
EGH81618 141 VVSCQVVDPEAYAFNADNPTTLVMNAIDRVLRRTVSRYAYDlatssdgneHKEPCLRd-DSDHISAEFKSEMQSILTKIG 219 Pseudomonas syringa...
EGD78189 133 VVIYQFVNSYRAAIEISRPTDYLSNQGEAVLKNVIANYVYEs-------hDDSPSLRt-HCNMVSHELRERLQERATAAG 204 Salpingoeca sp. ATC...
EKC96130 301 HVVWRVADTARAAHAVDDVARHLGECAEAALARVVSRRPVDaf------rPGVPTLR--HTEAVAEELTGLVAGAAAVAG 372 Streptomyces sp. SM8
EGB08754 253 VVTFRFSAPANTLLNTANPYGYVATQAKATLKQVCARYPYDshtl--dgsSSGPSLRg-ECAAVEAEMVAALQDRVRCAG 329 Aureococcus anophag...
AAM36108 198 VDVIEARISHLAYAPEIAQAMLQRQQANAVIAARSRIVAGAVGMVEMALSELQKNGVv----QLDEERKAHMVSNLLTVL 273 Xanthomonas axonopo...
EEP67294 186 ISIDETRFTHLAYAPEIAQAMLRRQQAEAVILARQTLVRGAIGMVAGTVAELEKRGIv----NMTEPEKAKLVTNMMTVL 261 Kingella oralis ATC...
ABQ14197 184 ISIDEARFTHLSYAPEIAQMMLKKQQAEAIMMARRTLVRGAISMVEGTIKELESRKIv----NLTETEKARLISNMMTVL 259 Dichelobacter nodos...
EEH52146 249 VKIVTFELSDLAYAAEVAPMMLVRQQAQALIDARSVIVQGAVSITHGALSELEERGH-----AFDGSQKARLISNMMTVL 323 Micromonas pusilla ...
EDQ89395 204 IHVHSFGLKEISYAPVIAAAMLKRQQASAMVQARSTIVNGAVDIAASALNALKLNGV-----EMQEHESARLVSNLLTVI 278 Monosiga brevicolli...
ADG69950 180 IRVLMVRLNDLTYAPEIAQSMLMRQQAMALIDARKTIVEGAVEIVKDAVTRLRDSGF-----ELSESDRDQLISNLLVVL 254 Planctomyces limnop...
EGH81618 220 MEVLDANFTNLSYAPEIASVMLQRQQAAAMMDARQMLVKGAVTVVQDAIAQMEKGEGdkqkvTMSEAQKGQLASNLLTVL 299 Pseudomonas syringa...
EGD78189 205 ILVHHFDLKEVSYAPVVAAAMLKRQQASAVIAARQAIVSGAVDIATTAVESLRERGV-----ELESAESTRLVNNLLTVI 279 Salpingoeca sp. ATC...
EKC96130 373 LEVFAVQPVRIAYAPEVAEAMGRRRLAALDALHRDALLAEAVDAVEETVRRLTARGLv----ELDAREHKALVRDLTVAF 448 Streptomyces sp. SM8
EGB08754 330 ATVLTMTLSELNYAPEIAGAMLKRQEAIAMLGARQTVVDGAYKIAQKTIARAEADGV-----AFMEGQKASLVSNLVITA 404 Aureococcus anophag...
AAM36108 274 CSDRGTQP 281 Xanthomonas axonopodis pv. citri str. 306
EEP67294 262 LSEENAAP 269 Kingella oralis ATCC 51147
ABQ14197 260 LSDENASP 267 Dichelobacter nodosus VCS1703A
EEH52146 324 AGESRPLP 331 Micromonas pusilla CCMP1545
EDQ89395 279 CSDTDVQP 286 Monosiga brevicollis MX1
ADG69950 255 CSGERTQP 262 Planctomyces limnophilus DSM 3776
EGH81618 300 VSERGAQV 307 Pseudomonas syringae pv. lachrymans str. M301315
EGD78189 280 CSESDVTP 287 Salpingoeca sp. ATCC50818
EKC96130 449 CAGRTAGG 456 Streptomyces sp. SM8
EGB08754 405 ASEVRVQP 412 Aureococcus anophagefferens
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