4JID,4OX3


Conserved Protein Domain Family
LdcB

?
COG1876: LdcB 
LD-carboxypeptidase LdcB, LAS superfamily [Cell wall/membrane/envelope biogenesis]
Statistics
?
PSSM-Id: 441480
Aligned: 408 rows
Threshold Bit Score: 88.0142
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4JID_A        41 LpedykpedlV--VPN------VPfsfsgtleKSYLRKEAAEALERLFDLANKE-GIQLNAVSGFRSYDYQKKLYANNVK 111 
WP_081439844 390 Ldpn----tlCdnPIPg-----QE--------HQLLQCDAVAPLAGLNKEFKNTfGHDLKLGECYRTYETQVLYKIRR-- 450 
WP_083775158   9 Iaaa----slKs---------aVI--------GVRLQAGAANSANRLAKAFEAHfGKPLRATDGYRTYALQKKIFQERYD 67  
WP_012879277 324 efveyappasngnvdpatlcnigD--------GWLLRCDAGAAFGRMNAAFRARfGHPIPLEGTYRAYYRQVELYREI-- 393 
WP_013350415 278 sntknytrkqvvkkangmlpesmlaaipwdkeKTLIAAPALADLTRMNTAFKKKfGKNIDVDLAYRTLDTQKYYYKEL-- 355 
WP_013769670 252 Lpps----alA--AVSwdvdprGT--------PYYLRTDATAALERLNAAFRARfGHDLDLDLTYRDYATQVAMRDAL-- 315 
WP_049791419 429 qaaqreawkrsllgyangripgealcgvswdssvQLRCDAAEALEQLNAEYVAAfGANLTISDSYRSYAGQVACRRTK-- 506 
WP_051805822 115 attaravngrlpmsavtrlpswsvnvsnlphepRYLSRAAAVGYLGLAAAFKARfGVALTITEAYRTLSRQQLLYRTL-- 192 
WP_052198756 866 Ipds----elQ--ALSf-----SS--------SDKMHKKAAKAMEEMNKAYKAEtGVDLTINEAYRDCDTQIAYSTPGNP 926 
WP_087471457 224 qdavscpapdqvwdpdggrvpdsalaaipwspsDRVRADVLDGLVALDAAYVERfGVHLTINSSYRTYEEQAGLYD---- 299 
4JID_A       112 RK----G-------------QEHTDRFSAKPGHSEHQTGLTMDVSS--KSa-NneleLTFaNTKEGKWLKENAHRAGFII 171 
WP_081439844 451 ------------------------GFWAATPGTSQHGWAAACDLSE--Pes-----eLGF-GTAKYNWLDANAPRFGWEN 498 
WP_083775158  68 RMsigrGpygdvrwwnggrwVRMRGAAAAVPGTSNHGLGLAVDFAS--Gi------nTSF-TSREYKWMSANAPAYGWTN 138 
WP_012879277 394 -----------------------GPGLAARPGTSQHGWGLAIDVTEr-Ga-------yDF-GTPRYEWLRTQGPAFGWSH 441 
WP_013350415 356 -----------------------GAYIAAKPGTSNHGWGLAIDVPE--Sh------aYSF-RGKYYKWLKSNSKKYNWLH 403 
WP_013769670 316 ------------------------GSVAAVPGTSSHGTGLALDVPElpCe-------yGW-GTPQREWLVANGPSYGWVV 363 
WP_049791419 507 ------------------------GWLCAAPGTSNHGTGVAVDFGG--Gi-------eTF-GTKQFAWMQSHAPSFSWTH 552 
WP_051805822 193 -----------------------GYPRAAVPGTSNHGLGNTIDFGI--ARtnAin-sPLYfGRSHDVWLTANSKRCGFDR 246 
WP_052198756 927 RYq---G----------------GAAAPAPPCISNHGWGLAVDINV--G---------GT-GSAVYKWLEANAHKYGYVH 975 
WP_087471457 300 --------------------PS--SPIAAPPGCSNHGLGFAVDLGG--Gv-------qAF-GTPQYDWLKQNAEAFGWTH 347 
4JID_A       172 RYPKGkesITG---YAYEPWHIRYVG-DIAESIykkkLt-LEE 209 
WP_081439844 499 --PSWar-eGA---YKPEYWHWEFASlTQYSKG----LgaLGD 531 
WP_083775158 139 SE--------Ga--SVNEPWHWVYdshkdtrkpkravklvvdg 171 
WP_012879277 442 --PSWar-qGG---GREEPWHFEFAG----------------- 461 
WP_013350415 404 RKNLEefrADGsrnPYAEAWHFEYNGq---------------- 430 
WP_013769670 364 --PSWar-qNG---SNPEYWHFEYRG----------------- 383 
WP_049791419 553 --PTWaa-rTG---SKPEAWHWEYVG----------------- 572 
WP_051805822 247 --PDYmd-rRG---SNPEWWHYNFVG----------------- 266 
WP_052198756 976 --PAWak-pGG---SKPEPWHWEYARn----------V----- 997 
WP_087471457 348 --PDFae-pDG---RVPEPWHWESVLaRADS------------ 372 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap