Conserved Protein Domain Family
recD

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PRK10875: recD 
exodeoxyribonuclease V subunit alpha
Statistics
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PSSM-Id: 236783
Aligned: 96 rows
Threshold Bit Score: 907.778
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
153949666   1 MMTLLAQAARDRLLRPLDVQFSRMIAGDDDPRLQLAAAILSAEVGAGHVCLPLRYLQPEllfGGRQPDLSLALWQAAgsp 80 
300718151   1 ----MQQAGELRLFRSLDIQFARMIASEDHPALMLAAACVSAEAGEGHVCLPLAQFTEQalfDGRQPELARQLWRAA--- 73 
259909489   3 LAEALQLAQHQRLLRPLDVQFACMVATEQQPALMLAAALVSRDAGEGHVCLPLAQLRPAsffAGRHPELAQALWQAAg-- 80 
269138068   2 RESLLSQMAQQRTLRPLDLQFATLLAGPQQPHLALAAALVSQELAAGHVCLPLTALDTAt-lSQRFPQQADAWPALLagw 80 
291618659   4 INALLLQAVEKRLLRPLDIQFARLIADDAQPFLLLAAACVSADAGEGHVCLPLANLSEAglfAGRQPALAQALWQAAg-- 81 
85059950    2 MEAILAEAQRLRLWRPLDVQFALMLATPAEPALMLASAWLSADAGAGHVCLPLALLTPErlfDGRMPPLAQQAWLQAgsp 81 
261822627   1 MIVLLEMAQARRLLRPLDIQFARMLADETQPDLLLAAACLSAHSGAGHVCLPLGNLQAQtlfDGRDPELAQQLLAGVgln 80 
253687311   1 MIALLETALARRLLRPLDIQFARMLVDETQPDLLLAAACLSAHSGAGHVCLPLENLQAQtlfDGRDPELAQQLLTEVgln 80 
50119936    1 MIALLEMAQVQRLLRALDIQFARMLADDTQPELLLAAACLSAHSGAGHVCLPLENLQAQtlfDGREPELAQQLITESgin 80 
242240422   1 MLELLLEAQRRHLLRPLDVQFAHMLAGDE-PYLLLAAACLSNHAGAGHVCLPLEQLQGDrlfDGRDPVLARQIMQLLgsp 79 
153949666  81 DKAQWLQALQNAPVVSDGSQPTPLVLQQERLYLQRMWQYEGDVVQFIASDSVfinrdsdfmtskgiATSVDESLLRETLD 160
300718151  74 GEPAWLDLLQNAEAVGDGSTATPLVLHQQRLYLHRMWQSEGEVARFIGREAA--------------ATAFDPQQLRAALD 139
259909489  81 APEDWQALLLAQSAVSDGQQATPLVVYQQRLYLHRMWQSEGEIAQFIQRQNY--------------PQDLEEKRVRDTLE 146
269138068  81 DVARWRDYLLAQPCVSGGDRATPLVVSHDCLYLQRLWRDEGTVAAFFAAACA--------------QPRRVDGALAPVLH 146
291618659  82 APDDVHAALAGWSAISDGSAVTPLVLSHERLYLHRLWQSEGQVARFFSLQPD--------------EGTFDAHRASEVLT 147
85059950   82 SQEDWQQRLLASPAVSDGSRPTPLVLDNQRLYLQRMWRYECAVAQFFNRARP--------------PVDGEEARIAAVLA 147
261822627  81 TAAAWQQRLLTSDAVSDGSKPTPLVLQGEKLYLQRSWQSEGRVAQFIASERD--------------TVSADEPAIRAVLD 146
253687311  81 TVSAWQQRLLASDAVSDGTTSTPLVLQGEKLYLQRSWQSEGRVARFIASERD--------------TMSIDEPAIRSVLD 146
50119936   81 TVAAWQQRLLASDAVSDGSKPTPLVLQGEKLYLQRSWQSEGRVAQFIASERD--------------TVSVDEPAIRAVLD 146
242240422  80 NVERWRSELQRCEPVDDGHRPTPLVLERDMLYLQRSWRNECQVAHFIANGQL--------------TTDMDERHIRQVLD 145
153949666 161 ALFgYAGS-EVDWQKVAAAVAATRRISVISGGPGTGKTTTVAKLLTALIRI-SQGQRLRIQLAAPTGKAAARLTESLGKA 238
300718151 140 RQFgQQPD---DWQKIAAAVAITRQISVISGGPGTGKTTTVAKLLATLLSL--SQETVRIRLAAPTGKAAARLTESLGKA 214
259909489 147 RYFgQQPD---DWQKIAAAVALTRQVSVISGGPGTGKTTTVAKLLASLIEL-SPTPP-RIELAAPTGKAAARLTESLGKT 221
269138068 147 RLFpATAQ-RPDWQQVAAAVAVTRRASVISGGPGTGKTTTVARLLAALVAL-APGRMPRIQLAAPTGKAAARLGESLGQA 224
291618659 148 SLFgSRPD---DWQKIAAAVALTRKTAVISGGPGTGKTTTVAKLLAALIRL-NT-VPLRIQLAAPTGKAAARLTESLGKA 222
85059950  148 RYF-PGDDaVIDWQKIAAAVAITHPVALISGGPGTGKTSTVAKLLAALLQL-SDGRRLRILMAAPTGKAAARLSESLSLA 225
261822627 147 RLFpDAGE-EIDWQKVAAAVALTRRIAIISGGPGTGKTTTVAKLLAALIEL-NTGEALRIQLAAPTGKAAARLTESLGLA 224
253687311 147 RLFpDTGE-AVDWQKVAAAVALTRRIAIISGGPGTGKTTTVARLLAALIEL-NTGEALRIQLAAPTGKAAARLTESLGQA 224
50119936  147 RLFpETGE-AIDWQKVAAAVALTRRIAVISGGPGTGKTTTVAKLLAALIEL-NTGEALRIQLAAPTGKAAARLTESLGLA 224
242240422 146 TLFpTVEK-EVDWQKIAAAVALTSRMAVISGGPGTGKTTTVAKLLAALIALrGDAQPLRIQLAAPTGKAAARLTESLGVA 224
153949666 239 IRQFSLTDDERKLFPDQASTLHRLLGVQPNSQRLRYHRGNPLNLDVLVVDEASMVDLPMMARLIAALPAKAKVIFLGDRD 318
300718151 215 LQRLEVSNEEKQRFPAEATTLHRLLGAVPGSQRMRYHAGNPLHLDLLVVDEASMVDLPMMANLIAALPSQARVIFLGDRD 294
259909489 222 LLQLQLADRILRSFPLEATTLHRLLGALPGSQRMRYHAGNPLHLDVLVVDEASMVDLPMLANLIAALPAHARVIFLGDRD 301
269138068 225 LAALALAPDQLQAMPREALTLHRLLGARADSARLRYHRDNPLHLDVLVVDEASMVDLPMMARLIEALPPQAQLILLGDRD 304
291618659 223 LQGLAVSEEERARFPAEATTLHRLLGAQPDTQRLRYHAGNLLHLDVLVVDEASMVDLSMMAKLISALPQHARVVFLGDRD 302
85059950  226 LQRLGLDEEQKQRLPREAITLHRLLGAQPNSQRMRYHRGNPLHVDILIIDEASMVDLPMMANVIAALPSQARVIFLGDRC 305
261822627 225 LHRLAVDQTQREAFPQEATTLHRLLGAVTDSQRLRHHQENPLHLDVLIVDEASMVDLPMMANVIAALPAQARIIFLGDRD 304
253687311 225 LHRLSVEPQQREAFPQEATTLHRLLGAVTDSQRLRHHQDNPLHLDVLIVDEASMVDLPMMANVIAALPPHARIIFLGDRD 304
50119936  225 LHRLAVDQRQRDAFPKEATTLHRLLGAVTDSQRLRHHQGNPLHLDVLIVDEASMVDLPMMANVIAALPAQARIIFLGDRD 304
242240422 225 LRQLTLSEAQLRSFPQAACTLHRLLGAMPDSQQLRHHRDNPLHLDLLVVDEASMVDLPMMAHVMAALPAHARVIFLGDRD 304
153949666 319 QLASVEAGAVLGDICRFAELGYSEQRAQQLTQLTGYLLTNNALTsnvlasnvltnkalankaqpdetysDSANVRDSLCL 398
300718151 295 QLASVEAGAVLGDICRCAETGYSLARAEELSALTGCLIEGREDP-------------------------QAPPVRDSICL 349
259909489 302 QLASVEAGAVLGDICRCAEEGYSPQRAAELTRLTGCEVAGREDA-------------------------SASAVRDTICL 356
269138068 305 QLASVEAGAVLGELCRFAEYGFSAARAAELSQLCDAPIPAGETQ-------------------------PAVALRDAISL 359
291618659 303 QLASVEAGAVLGDICRCSETGFSPSRAAQLTALTGCTLTGDDVE-------------------------AAPAVRDSICL 357
85059950  306 QLSSVEAGAVLGDICQFAEAGYSPAQRAQLARLTGFTLPAGC---------------------------DGYGVADSLCL 358
261822627 305 QLASVEAGAVLGDICRFAEAGYSRGRTQQLQRLTGCMLDGSGPE-------------------------GQTTVGDSICL 359
253687311 305 QLASVEAGAVLGDICRFAEAGYSRARAQQLQRLTGCKLDESGPE-------------------------GQATVSDSICL 359
50119936  305 QLASVEAGAVLGDICRFAEAGYSRARAQQLQRLTGCALDESGPE-------------------------GQTTVSDSICL 359
242240422 305 QLASVEAGAVLGDICHFTGQGYSPARTEQLQRLTGCALPPPSPK--------------------------ASSVADSICL 358
153949666 399 LRKSYRFDEKSGIGQLALAVNAGEYRQALSVLNSAY-SDVERFPLADEEDYQVLLEACAVGYQHYLERVAALAPAAEVLA 477
300718151 350 LRKSYRFDASSGIGQLALAVNAGDTRQVDAVFAADY-ADIERFTLGSSEAYQHLLTACVAGYRDYLSRLAAGAQPADVLD 428
259909489 357 LRKSYRFTQSSGIGQLALAVNAGEVKRAEQLFSKGL-SDIRHHTLSSSEDYQQLLDDCVAGYREYLKLLKEGATPGEVLA 435
269138068 360 LRHSYRFDARSGIGQLALAVNRGDRRMAMACLADRF-ADLHWHEIAQDEDYQTLLTCCLAGYRPMLEGILRGEAPAQILA 438
291618659 358 LRQSYRFDEKSGIGQLARAVNQGDARQMSAIFAAGH-QDVSFQPLNDGDAYQAMLDEVARGYSDYLHAVQHQATPEQVID 436
85059950  359 LRKSYRFDEGSGIGRLANAINAGDGKGALGLLKAGTaADVDYTPLREAADYQRLLDDCVSGYWDYLQRVRDQDAPAAILD 438
261822627 360 LRRSYRFDPHSGIGQLALAVNGGDEARVRVVLNGEF-ADITCSPLAEAEEYQVMLAQCVEGYRDYLQLITVGAPPDAVLL 438
253687311 360 LRRSYRFDPHSGIGQLALAVNGGDDVRVRAVLNGEF-ADITCSPLAEAEEYQAMLAQCVEGYRDYLQLIAAGASPDAVLL 438
50119936  360 LRRSYRFDPHSGIGQLALAVNGGDDARVRAVLNGEF-ADITCSPLAEAEEYQAMLAQCVEGYRDYLDLIAAGATPDAVLH 438
242240422 359 LRKSYRFAASSGIGLLAQAVNQGDERRVKDVWHGGY-SDVGCHPLREASDYQQLLTLAVTEYRRYLQAIDDGAEPAVVLR 437
153949666 478 AFGRYQLLCALRSGPFGVSGLNERIEQVLHRKGFIIRPsgPSGRWYVGRPVMIELNDSALGLFNGDIGIALHDNEGeLRV 557
300718151 429 AFSRFQLLCALREGPFGVMGLNERIEVSLQKAGLIRRSpgAANKWYPGRPVMIARNDSALGLFNGDIGIAMLDEEQaLKV 508
259909489 436 AFGRFQLLCAVREGPFGVAGLNDRIEQTLRLTGLIRRNtaLNGKWYAGRPVMIARNDRALGLFNGDIGIAMPDEKQqLKV 515
269138068 439 KFARFRPLCALREGPFGLHGLNERIALTLQRAGLIRRAheGQKHWYAGRPVMITRNDASQALFNGDIGITLGDEQSgWQV 518
291618659 437 AFSRYQLLCALREGPFGVHGLNQRIEQRLMQLQRIRRPa-LGSRWYAGRPVMITRNDSALGLFNGDIGITLRDEEGqLRV 515
85059950  439 AFNRFRLLCALREGPFGVAGLNDRIEQALSRAGLLTLG--NAGRGYAGRPVMIVRNAPSLGLYNGDIGILLREDEQtLRV 516
261822627 439 AFQRYRQLCALREGPFGVAGLNQRIEQALHQSGLIQRSrnPLNRWYPGRPVMIERNDAALGLFNGDIGIAMMGENReLRV 518
253687311 439 AFQRYRQLCALREGPFGVAGLNQRIEQALHQAGLIQRSrnPLNRWYPGRPVMIERNDAALGLFNGDIGIAMTGESGeLRV 518
50119936  439 AFQRYRQLCALREGPFGVAGLNQRIEQALHQSGLIQRSrnPLNRWYPGRPVMIGRNDAALGLFNGDIGIAMMGGNGeLRV 518
242240422 438 AFQQFRLLCALREGPFGVEGLNQGIEQALRSARLIPALpaNGSRWYVGRPVMIARNDTILGLFNGDIGIALLNAQGeLRV 517
153949666 558 YFQLPDGNIKSVQPSRLPSHETAYAMTVHKSQGSEFEHTALVLPNTFMPVLTRELVYTAITRARQHLTLYCSDAVLSHAI 637
300718151 509 FFPLPDGSIKAVQPSRLPPHDTAYAMTVHKSQGSEFDHTVLVLPNQFTPVLTRELVYTAITRAKLRLTLYAEQNVLNSAV 588
259909489 516 YFPLPDGTLKAVQPSRLPPHDTAYAMTVHKSQGSEFEHTLLVLPNQMMPVLTRELVYTAMTRARQQLTLYADFSVFNSAV 595
269138068 519 WFMGSDGAPRAVQPNRLPPHETAWAMTVHKSQGSEFDHTLLALPTQPSPVVTRELVYTAITRARQQLTLFATQPVLERAI 598
291618659 516 FFPLPDGSVKAIQPSRLPSHETAWVMTVHKSQGSEFDHTALVMPTQFLPVLTRELVYTAITRARSQLTLYSDRAIFDRAV 595
85059950  517 HFSLPDGGIRAVPLSRLPEHETAFAMTVHKSQGSEFQHTALVLPNQIVPVLTRELLYTAVTRARARLSLYATDEVVQYAI 596
261822627 519 FFPLPNGETKDVTPSRLPPHETAYVMTVHKSQGSEFDHTALVLPNHYLPVLTRELVYTAITRARQRLSLYTDVRILCRAV 598
253687311 519 FFPLPNGETKDVTPSRLPPHETAYAMTVHKSQGSEFDHTALVLPNHYLPVLTRELVYTAITRARQRLSLYTDIRILCRAV 598
50119936  519 FFPLPNGETKDVTPSRLPPHETAYAMTVHKSQGSEFDHTALVLPNHYLPVLTRELVYTAITRARQRLSLYTDVRILCRAV 598
242240422 518 CFPLPDGSVKPVPPSRLPPHETAFVMTVHKSQGSEFEHTALVLPNMMLPLLTRELIYTAITRARQQLSIFADEDILCQSV 597
153949666 638 RTPTLRLSGLVDRLNTLN 655
300718151 589 KMRTLRRSGLVERLTE-- 604
259909489 596 KIRTQRRSGLVDRLNNRA 613
269138068 599 RTPTERRSGLMARLLAAA 616
291618659 596 QLQTQRRSGLVERLGAAG 613
85059950  597 ATRTQRRSGLIERLAAGA 614
261822627 599 KTPTQRYSGLEERISALM 616
253687311 599 KTPTQRYSGLEARISALM 616
50119936  599 KTPTQRYSGLEERISAFI 616
242240422 598 CAATRRYSGLAQRILMLA 615
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