Conserved Protein Domain Family
HTH_16

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pfam12645: HTH_16 
Helix-turn-helix domain
This domain appears to be a helix-turn-helix domain suggesting that this might be a transcriptional regulatory protein. Some members of this family are annotated as conjugative transposon domains.
Statistics
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PSSM-Id: 463654
Aligned: 48 rows
Threshold Bit Score: 36.8238
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_008788617     10 FELICKASSGDEMAVKEILKFYDGYISKLCLRpfyhsesgkIIMQVDEELKGEIHTDMMKAILKFE 75  Firmicutes
jgi:Desmer_2323   9 ETLWELLKQNDEQALVQVLIRFDSLIKSKSR----------VNGRINEDIAQDIREAFVKALKK-K 63 
Q8RCL2            8 FAVILKAKQGDKEAIEEIIKRFEPLIMDSVKG---------VDEEIEEELRQDIVEIIIKAVKKFE 64  Caldanaerobacter subterran...
WP_015253213      7 FTLVQKAKAGDKEAMKEILHLVEPFIQKACRR---------ASPNERNDLQQYLAEKVIVAVKNYD 63  Thermobacillus
BAH46564          4 LTLVKRAQNNDESAMVEIIERFEPKIRKSLRF---------TDISVREDIHQEIVFRMIKAVKSYR 60 
CDD29704          7 REVLEKAVRGDKVAMEQIFILYKPMIDHASV----------VNGKLDEDFRQEIFLHLVTAIPKFA 62 
CDB27376          4 KELLLQAKFGDRTATTELLMLYQPLLLKESI----------IDGILDEDLYQELCIVFMRCIDRFD 59 
OUP79389          4 DELLYRAKAGDMDAKAEIFAMYRPLLIKYSL----------VNRRFDEDLYQELAVELMKCIRYFR 59 
CDD86865          5 VGVLCRARMSEREAIQLIVEMYRPLMLKYAN----------LNTGFDDDLYQEFVCCVISCIFKFP 60 
WP_012158039      7 REVFNSAKNGDQIAMEKMLKMFRPLIYKNSF----------IDGKFDEDCFQDISIKFISCIKTFE 62  Alkaliphilus oremlandii
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