Conserved Protein Domain Family
ydjY_domain
?
NF040466: ydjY_domain 
YdjY domain
The founding member of this family is the poorly characterized protein YdjY, an apparent lipoprotein, of Escherichia coli K-12. Many members are lipoproteins. YdjY and other members of its branch of the broader family have an invariant GCxxCxxxC motif.
Links
?
Statistics
?
PSSM-Id: 468506
Aligned: 153 rows
Threshold Bit Score: 88.7636
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
?
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
WP_144995827  57 VLIDRAGNRLLVKGKIVL-QRG-LLEMFCC-LDGsKEHESIVSTS-AKAYVVHGGLLALGAEA--GS-PVKY-------- 121 Polystyrenella ...
WP_073478136  53 LTINKMSKQATIKVRTAI-DQG-VLEYLMVdDHG-KAYESAFKVDnLLPSKLNFSLLLLGIEP------LDYnkllelar 123 Desulfatibacill...
WP_200281552  92 IEFDKAKRTITIPASVLM-REG-AVEYLLVtRTG-KVHESVFVTD-ADPQDIHLAALLLGIRP--SA-DLGPa------- 157 Haloferula rosea
WP_143185433  85 VILDKKNRAVHVPAEVNM-TEG-VVEYILVaDSG-KLHESVFSTS-AKPADIHVACLLLGMKE--LP-VAQWp------- 150 Rubritalea squa...
WP_189514138  39 VIVDPDRRTATLPVRLNQsNDGeQIEYLLVhENG-KTHESLLKTS-IQPFHLHTAMLLLGVSRaaAQhAVAPpeni---- 112 Cerasicoccus ar...
WP_184019462  59 IEFDPKTREIQFPAQVNQ-VEG-LLEFLLVhENG-KIHESLLSTR-ISAVHLNIALKLLHYQA--SR-ELYLrikddgta 131 Haloferula luteola
WP_200278921  58 VTFDPKTREIQFPAAVNQ-TQG-LLEFVVVhQNG-KVHESLFVTD-ISATHLNLAFKLLGYVA--SP-ELYFkveedgsl 130 Haloferula rosea
WP_200273862  46 ISFNSKTREIEFQTTVNM-DEG-LLEFLLVhENG-KIHESLLYTD-ISATNLNIALTLLHYKP--TH-GETL-------- 110 Luteolibacter p...
WP_012419577  65 VIVNHKERTVSFQAQVNM-KEG-ILEYVCCmPNG-KLHESLLVTE-ADPLHISLGMTLLKFHRfeKFfPVRDenfew--- 137 Akkermansia muc...
WP_033368004  68 VWLHTQSRMIRYVVSAEV--VDsNLEYAMThSTG-KVHETLFSTD-VLPAQLHYAAMLIGVQK----------------- 126 Rubritalea marina

WP_144995827 122 -----YPEYTAPKGQKMEVNVIWTDKeGKEQKADAQSW-IRYvveryyyvvvdpfpsdltlpengegdlryddfnkelyw 195 Polystyrenella ...
WP_073478136 124 nengrEALLAQHKNSLVRISLAR----GE-KNLRLDEI-VRD-------------------------------------- 159 Desulfatibacill...
WP_200281552 158 -----DSSMTVPPTAALQASVTWDRN-GPPQTIHLHEAlAIApa------------------------------------ 195 Haloferula rosea
WP_143185433 151 -----KSYLQADKTSQVAVEIVWKSN-GPLKRLPATEC-VLRtds----------------------------------- 188 Rubritalea squa...
WP_189514138 113 -ddeyLALAPSPLGPGVSIAII-----AGEERIPVETW-VWD-------------------------------------- 147 Cerasicoccus ar...
WP_184019462 132 ssefqPATDEEKAGSRVQILLLAK---GATQPVPASDWiAYE-------------------------------------- 170 Haloferula luteola
WP_200278921 131 ssefeQSTEEQKKKSRVQLSVDLTKD-GKTDRQPVSKW-ITHa------------------------------------- 171 Haloferula rosea
WP_200273862 111 -----------EKASRLQISLKWKEG-DKERTATANEL-IQHs------------------------------------- 140 Luteolibacter p...
WP_012419577 138 -lpftEPKPEDYADSYVQIVMTYTEN-GREQKSDFSDI-VVN-------------------------------------- 176 Akkermansia muc...
WP_033368004 127 -------------GDPVEVRLRWKVF-EEDHACSLEEL-IA--------------------------------------- 152 Rubritalea marina

WP_144995827 196 fghmtkdqraemkrlskneeyqkaidvfyerSQPR--EMD-SQFIFTGsrfvkdeetDEQFYLAEDGCLICVANMPTAMI 272 Polystyrenella ...
WP_073478136 160 -------------------------------REKEkgELL---WVFTGsrf----tkDGRFVGDISLSHIAMWPDDSAVI 201 Desulfatibacill...
WP_200281552 196 ------------------------------gETSPsgPAPaTLWLYNGsri----qqDGTFVARREGSIISVIRDPEALI 241 Haloferula rosea
WP_143185433 189 ----------------------------erlDSGGvgGLAsGHWVYSGsn-----vrGGAFAASSEGSVISIIADDAALV 235 Rubritalea squa...
WP_189514138 148 --------------------------------EARqsAMLpANWVYTGsy-----fqGVNFIAEVDGSFASLITDPASLI 190 Cerasicoccus ar...
WP_184019462 171 -------------------------------STEK--TMPsDPWVYGGst-----fnQGRFLAESSGDLMAIFLSNSALF 212 Haloferula luteola
WP_200278921 172 -------------------------------STEK--DMPsSAWVYGGsf-----iyDGKFVAETSGDLIAVFLSNSALI 213 Haloferula rosea
WP_200273862 141 -------------------------------VKAS--AMPaGPWKYFGsa-----vsNGKYLPQITGDLIAIYTTQSAII 182 Luteolibacter p...
WP_012419577 177 -------------------------------SQTRk-GLNpSDWLYTNsf-----fyEGAYQASLSGEVISIFASRTSPI 219 Akkermansia muc...
WP_033368004 153 -------------------------------VDGKeaQERlSGWLYTGev-----srAGFLNAHAEKSLIALINDPSALI 196 Rubritalea marina

WP_144995827 273 DVSIESSSQGtdSLLFE-PFTERIP-PIG-TEVMVEIVPV 309 Polystyrenella longa
WP_073478136 202 NLFSDRGNPYrgELGFV-MNTENKAlKKD-QEFELVLEAY 239 Desulfatibacillum alkenivorans
WP_200281552 242 NYPGDTRDND---EIHL-PNAAALP-KLE-HPVRIVLKLR 275 Haloferula rosea
WP_143185433 236 NGLRPRNQDD---TLYA-ANAKVLP-NKN-FKVEVVFKLP 269 Rubritalea squalenifaciens
WP_189514138 191 NSGDPRRTVD--DNWYInAQASSLPkADEtVLLEIALLPE 228 Cerasicoccus arenae
WP_184019462 213 NFSGKDNQND---EVWL-PHATRVP-DLG-TPVTVIVRPY 246 Haloferula luteola
WP_200278921 214 NFSGKDNQFD---DVWL-PHPKRVP-AEG-TKVTVVIHPY 247 Haloferula rosea
WP_200273862 183 TYPGESNDDD---TVWF-PYPKRVP-AVG-TPVTLIISPY 216 Luteolibacter pohnpeiensis
WP_012419577 220 NYIGDFHDGVn-DTGWI-VNPQKNL-PLG-TNVTVTISQK 255 Akkermansia muciniphila
WP_033368004 197 NRAGNATVPQ--DDIYSySTKLPLP-KPG-MPVQVELHFR 232 Rubritalea marina
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap