Conserved Protein Domain Family
YjbM

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COG2357: YjbM 
ppGpp synthetase catalytic domain (RelA/SpoT-type nucleotidyltranferase) [Nucleotide transport and metabolism, Signal transduction mechanisms]
Statistics
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PSSM-Id: 441924
Aligned: 282 rows
Threshold Bit Score: 103.702
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015281187    2 NRIA-KTKQQarFLADYE-EyVRTVLKPTQDVLKRIFREwkqpdywrrtdlhsrrpaPTPV-QRALTRVKRPESVLDKIY 78  
WP_041250606    2 RAGIfQFMND--AVKLIN-S-RNKFINFVAEEAKEFFSKvfe-------------tnE-DV-ININARVKKEDSIKEKIL 62  
WP_015904306    2 RK---RQKEA--ILVTFL-K-EKEKYEKLAEYIIQFFKEdps-------------spKENL-HTILYRIKEKKRLIEKID 60  
WP_013293760    1 -----------mNFDDYEkR-YFSLYTEYAETVRFIIEKaia------------atgGLPVlQSIQARAKAPDRLKDRLE 56  
WP_013639408    2 TISE-DTIKN--AVLRYH-R-EYDRYLKLSARVAEICRFeiv--------------egnAIrAQVTFRAKSPKSLEGKLR 62  
WP_007092227    2 SGFD-EKIGE--VIDFFEsK-EIDRLGKLVRFVTAKLEQels---------------qkGIlARVSSRVKSSQSLRGKLI 62  
WP_014956500    2 RK---RQKDA--ILISFF-K-EKEKYEKLAEYIVSLIGDdps-------------apKESL-HTIKYRIKDKIRLIEKID 60  
WP_068759719    2 PLAEfRYIEK--ALSTLD-K-ERDQLEVISKLLQMEFTEimn-------------lhTMEY-LNITTRVKGRDSLKEKIL 63  
WP_083428176   10 KIPLfSYIDE--AIDLKH-S-LRFEIEEAQQAIDSFFEQsfg-------------hlD-SF-VNYTSRVKADDSLKEKII 70  
WP_083430815   20 KLKEfVFIDE--VIAYKH-A-LRFSLSEAQSELDHFFLSifr-------------ddD-HF-VNYTSRIKEDESLKEKLI 80  
WP_015281187   79 RKPdsfpn-----glsrDSMLAMHDTLAGRIVTYFLSGFPII--DRELH---SNS----------DIEivdEDp--pVAY 136 
WP_041250606   63 KQNyyikc-----kdveDVFSLFPDLIGVRIECRFNENEKDL--YEYLK---RLF----------YYK---DE----NGY 115 
WP_015904306   61 EENrdlemgv-tpitqhNFQERINDLLGIRLICLRLSDIDKI--KAYLEllvEEk----------MLKf-lRKpdhkRSF 126 
WP_013293760   57 EVGlie---------sqNIEEDRKDLAGIRLIFYTNTDVDRFlaSRLIF---ENF----------EIDl--Q-----ATK 107 
WP_013639408   63 RFAasgkrd---lptvqSVFDAVRDLAAVRIATYEQRHEDQV--VQLVC---NRFvdlk--gakpQSE---R-----KDK 124 
WP_007092227   63 KWSkdaekkrkfegspeVVLSGVSDLAAARIMTYTEQDREAV--VGIIK---SIFstpqgysvdfDLEr-kEE----HIR 132 
WP_014956500   61 EENkkpenka-aaitqkNFQKKIEDLLGIRLICLRLSDIDRV--KTYLEllaDEk----------ILRf-iREpdhkRSF 126 
WP_068759719   64 RQGyykky-----ndpiRLIYQLSDLIGVRIECRFEQDERAI--YKVLK---KHF----------NVR---ND----DGY 116 
WP_083428176   71 RQNllht------vsaeQLFGHISDLIGSRIECRFIRDEEQI--YRALF---KLF----------PTK---RS----DGF 122 
WP_083430815   81 RRNymrrf-----dnaeAVFDSISDILGCRIECRFIDDEAVV--FRQLL---RYF----------PKE---RE----NGY 133 
WP_015281187  137 Ldprllsrl--gmshldsqYKESGYASIHYIVKVRipgm-----epskRPCVEIQVRTLAEDIWGEVEHLLGYKPN--KK 207 
WP_041250606  116 YyskydmrirlnldqpqpqKQKNGFEIYKIDAIFVene--------emKINFEVQIKSMVNVFWGEVDHSILYKNS--NY 185 
WP_015904306  127 Ilpvdpge----sipdglsLRYSGYSSIHFQVTLGelsda---paelkKLQIEFQLRTILEEAWGEIDHKYRYSLS--RS 197 
WP_013293760  108 Ihhp------------tkeNEGTRYQAIHYVVSLKeeraklpeyakfkKLRCEIQIHTILNHAWSETSHDILYKDRphAG 175 
WP_013639408  125 Na----------------aDNNNFYRATHIEAFLPeadvig-tyanvsDVPCEIQVCSMMAHVWNEIEHDLGYKPLt-GS 186 
WP_007092227  133 Ir----------------nNPRNHYRATHMMVSVHendlqg-dfanlkFDKCELQITSLLAHVWNEIEHDTVYKSL--SG 193 
WP_014956500  127 Ilpvdpgk----tipegldLRYSGYSSIHYQVELGensga---ddelkGLQVEFQLRTILEEAWGEIDHKYRYVFS--RR 197 
WP_068759719  117 YynemnpnvklslderqpqKQKNGFKIFRIDGIVTdt---------nnELPFELQIKSLVNSFWGEIEHKIIYKNY--NF 185 
WP_083428176  123 YqcdrdprielrldepqpkNQKNGYRSYRIDGHFLgq----------qVLNFELQIKSIVNVFWNEIDHKILYKNY--NY 190 
WP_083430815  134 FrsdrdprielnlhapqpaRQQNGFHSYRIDGRFFgd----------rVFNFELQIKSIVNLFWNEIDHKILYKNY--NY 201 
WP_015281187  208 ---TSF----AVRKQFEIIASQ-LAAIDEHFNFLYDELL--RF---------QEevE----IAD 248 
WP_041250606  186 v--MTEd---LIRDVMYSIKNN-LTIIDKQLNSVYKKMM--TVesneddatrQQ-------FKS 234 
WP_015904306  198 gvkLPE----HIHTGFQNLSAY-LQAASLHAEHLCRQTEahQVvt------tRKt------RKK 244 
WP_013293760  176 ---FGSkameSISKRFNNIMDTyLMPAGYEFQRVQHDYE--RLqq------gKKlfDrg-aIAS 227 
WP_013639408  187 ---LSE----QERSLLVSLGFA-VRQGDITIGNLFAETEr-----------rQR--EhggvFTD 229 
WP_007092227  194 e--LSE----AERDAIDSLGHL-TKTGDNIIQSLLHSREirER---------QE--RlnydIES 239 
WP_014956500  198 gddLPD----YIHTGFYSLSAY-LQAAALQAEHICRQAEahRLak------tRKvkskvvqvpv 250 
WP_068759719  186 l--LVDd---LLIEMMHSIKNN-LALLDKQLLTIYRNVE--QRqtdeeyqrrN--------LED 233 
WP_083428176  191 v--LTEk---FVHDIMDSIMGD-LIIIDRQMEMLYDQLG--TLdapdqfqarEQ-------LKT 239 
WP_083430815  202 i--VSEq---FVREIMDSIRGN-LSIIDRQMQMVQNHLR--RLesdgltdpgQQ-------IRT 250 
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