2O5W,3SON


Conserved Protein Domain Family
NUDIX_DHNTPase_like

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cd04664: NUDIX_DHNTPase_like 
dihydroneopterin hydrolase
DHNTP pyrophosphatase (DHNTPase) catalyzes the hydrolysis of dihydroneopterin triphosphate (DHNTP) to dihydroneopterin monophosphate (DHNMP) and pyrophosphate,the second step in the pterin branch of the folate synthesis pathway in bacteria. Members of the NUDIX hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue NUDIX motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of NUDIX hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the NUDIX hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.
Statistics
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PSSM-Id: 467549
Aligned: 49 rows
Threshold Bit Score: 102.328
Created: 8-Dec-2006
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:NUDIX motif [structural motif]
Evidence:
  • Comment:G[X5]E[X7]REUXEEXGU, where U is a bulky aliphatic residue (usually Ile, Leu, or Val).
  • Comment:The NUDIX motif contains many of the active site residues of NUDIX hydrolases.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        ######## ##############                      
2O5W_A     10 VSILVVIYAqd--tkRVLMLQRrdd--pdFWQSVTGSVEEGETaPQAAMREVKEEVTIdvvaeqLTLIDcQRTVEFEIfs 85  Escherichia coli
EEG77241    4 RCIMVFLYKwqngepRYLLLKRnpk-lggYWQPVTGFIDEPETnRHAALRELTEETGIee---yERVTDpNHYFFFDMng 79  Dethiobacter alkal...
CCB87465    9 ITITAFIIKkaepydQYLILRRcsshffgSWQPVTGGIEDGETaWEAALREIQEETDLqp---dRFYAGeVVEIYYEVyr 85  Parachlamydia acan...
EAR65972   23 TGIAAILIKklekesKVLLLKRagtvlpdAWCYIGGSIEDGETaWKAALREIKEETGIsl---pYLYVSnQYDQIYSAnd 99  Bacillus sp. NRRL ...
EAP94420    7 SIVSGVAISeidgqmKMLLMKRvk---geFWCHVAGSIEAGETgWQAIVREFEEETQIkv---eALYNAqFLEQFYEAhv 80  Vibrio splendidus ...
EIM00707   12 SMVSVVALRgsgaatQMLVARRagayldgAWSYLAGHVEAGETgWQAALRELREETALvp--qsFWATS-FCEQVYLAat 88  Rhodanobacter thio...
AEV36532   11 NGVSVFLLDldeknpQVLLMRRadt-llgAWCQVAGKIEPNESgWEAALREVKEETGVll--deLWSAD-LCEEFYVPek 86  Pseudovibrio sp. F...
EKV32672   24 TAVAAAVINg----rQVLLLKRskgafrgHWTLVSGRIEGEEKaWQAAVREVREETGLkp--itVYTSG-NTDVFYNPvd 96  Caenispirillum sal...
BAC62101    9 VSGVVISRIdg--vdKILLLKRvk---ggYWCHVAGGVEAGETgWQTILRELKEETQIdh---vELHKAdFLEQFYEAke 80  Vibrio parahaemoly...
ADI37933   14 HTVCYVVRMvng-qsEYLLMQRcseylngNWQMVTGSIQTGETaWQAALRELYEETSLkp--kiFYKVD-QVESFYELel 89  Waddlia chondrophi...
Feature 1                                                                   
2O5W_A     86 hlrhryapgvtrNTESWFCLAlpherQIVFT--EHLAYKWLDaPAAAALtkSWSNRQAIEQF 145 Escherichia coli
EEG77241   80 ----------tsCSVSVLAVEvtdppEIEISf-EHTECKWLSyEEARQTlyWENNVETLDKL 130 Dethiobacter alkaliphilus AHT 1
CCB87465   86 n---------avVTVPVFVAFidxpqEVATSptEHDAFLWLPyEEAFSYleFAEQRRALTYV 138 Parachlamydia acanthamoebae UV7
EAR65972  100 n---------yiYMAPVFVGYvpehqEVILNh-EHSAYRWMSfAEAIETasLPGNDAVLMSV 151 Bacillus sp. NRRL B-14911
EAP94420   81 n---------viQLIPVFAVLcppnqAIELNd-EHTEYCWCDlEEAKALapFPNQHAVYDHI 132 Vibrio splendidus 12B01
EIM00707   89 d---------tvEIVPAFVARlaegvQVRLNg-EHSAFRWVTlDEAAALlpFGSQRELLAHV 140 Rhodanobacter thiooxydans LCS2
AEV36532   87 n---------iiQKLPVFVSFissetPITINe-EHDAYQWFSfDDAMELfsFPGQRRILEYL 138 Pseudovibrio sp. FO-BEG1
EKV32672   97 e---------vmEVVPIFVVRvagqePVELDe-AHEDHSWLPlPRAIDSvaFPGQRRALESI 148 Caenispirillum salinarum AK4
BAC62101   81 n---------riLVIPCFVLFcppnqPVVLNe-EHTEYRWCSlEEAKQLtpFANQHHLYDHV 132 Vibrio parahaemolyticus RIMD 2210633
ADI37933   90 d---------kiLFGPIFLAIvnpeqAVRLSptEHRCFIWKPlEEALKYlqFSNQRRIISFI 142 Waddlia chondrophila WSU 86-1044

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