Conserved Protein Domain Family
VI_zyme

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TIGR03357: VI_zyme 
type VI secretion system lysozyme-like protein
The description for Pfam family pfam04965 cites acidic lysozyme activity for some phage-encoded members. This family represents a different subgroup of the proteins from pfam04965, where all members are associated with bacterial type VI secretion system genomic contexts.
Statistics
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PSSM-Id: 274540
Aligned: 33 rows
Threshold Bit Score: 103.072
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAS58123       8 RPSVLDRL----FddfpQER---TERTSDRRYDLAHFRWAVRRDVEDVLNTRSAL-----------S-----------Ld 58  Edwardsiella tarda
NP_534816     16 SRSILDRL----LddapDAE---TDMLVSLKDQASEMREVIRRDLEALLNTRRNP-----------A-----------Gp 66  Agrobacterium t...
WP_011409203   5 EPSLLEKLfddtP----KST---GGSHVFKAISIDQYKESVARDLEGLLNTRSAF-----------SeegltefpnckQ- 65  Xanthomonas oryzae
WP_011682025  11 TQSVLDRLidrdP----AST---SETPPTRAQSVRHLKVSLRRDLELLLNSRRTP-----------E-----------Aa 61  Candidatus Soli...
WP_011287915   6 EPSLFDKL----F----DDQ---PVGAARRRLSLEQLKDSVARDLEALLNTRVVLddgfettypltM-----------R- 62  Dechloromonas a...
WP_011398024  11 RPSVLDRLiderP----DLK---VEPEKNRHQVLNELRESVRRDLEDLLNTRYRP-----------I-----------Sa 61  Hahella chejuensis
WP_011507566   8 iPTLLDRLlddaP----QHS---SEVQPGHRCSLADYKQSVVRDLELLVNTRREL-----------V-----------Ae 58  Chromohalobacte...
WP_011468015  11 lPSLLDRLidddP----DRS---LEAVKPAGVVLADIKANIRRDLENLLNTRIYR-----------Q-----------L- 60  Saccharophagus ...
WP_011137532  10 lPSVLDRL----L----DDEpdqSHIESISLFELPQFKRALARDLEALLNTRLMP-----------L-----------De 59  Chromobacterium...
WP_011081387   7 vPSLMDKLt--dS----DPL---SSIDRDFPLTRHALMDSLRRDLESLLNSRINW-----------M-----------Tl 55  Vibrio vulnificus
AAS58123      59 idqw-pelekS----------PLNYGLPDCSNLSAANAEDREwIRQHIERAIDLFEPRLSQVRV-HIHlD-E-KT-GISQ 123 Edwardsiella tarda
NP_534816     67 pavl-keladA----------LVSYGVDGILSANLVTDASKAqLARSIERRISLFETRLADVHV-TILkN-R-TD-GDRA 131 Agrobacterium t...
WP_011409203  66 ----------S----------LLTYGLGDFSAMSLANGYDRTmICRSLEQAIARHERRLRNVHV-TLE-T-A-GQ-FGGG 120 Xanthomonas oryzae
WP_011682025  62 gsey-eelekS----------LYNFGLPDVTSLSWDSARDRArLARMIEKTLSTFEPRLSGVRV-VAV-E-A-TTgAQHV 126 Candidatus Soli...
WP_011287915  63 ----------S----------VAGFGLSDFAGLSLANVHDRRrICASIESAIAAHEPRLREVRV-DLE-L-H-RK-TVNA 117 Dechloromonas a...
WP_011398024  62 sdnl-rqldeS----------LINYGLPDLHTINFLSAEGKSqFCRTVEQHIAMFEPRFKSVRViTLD-E-D-WA-EGAT 126 Hahella chejuensis
WP_011507566  59 eldawptlqgT----------LLDYGLPDFISRGVRSTEDRRlIQRQLERTIEQGDRRFSSVHV-QLL-N-Q-DS-HDRI 123 Chromohalobacte...
WP_011468015  61 ----------SidaypelqksLVNYGIKDFSHVQFDSDEERIqFAWSIRRAIEDYEPRFQWVQV-DIE-PfG-ED-FQRT 126 Saccharophagus ...
WP_011137532  60 lmesfpqardS----------LLTFGIPDLSGISLLNPDDRElLREQLRRSIELHEPRLSRVRV-NLD-A-P-RE-MERH 124 Chromobacterium...
WP_011081387  56 sdel-reiqtS----------ILRYGLPDFSSMPFSSADGQQvLCQRVKETIQQYEPRLNYVSV-AIA-E-DkNP-LDRI 120 Vibrio vulnificus
AAS58123     124 LIFRIEALLDVDPSPEPVMFDAVLDvS-T-QLYRI 156 Edwardsiella tarda
NP_534816    132 LRMRIQASFRLQEGMPPISFESRIDpS-T-QRFLV 164 Agrobacterium tumefaciens str. C58
WP_011409203 121 LHFTIHALLDMEPAREPVSFDAMLQ-P-StLQYSV 153 Xanthomonas oryzae
WP_011682025 127 MRFQIEGMLDMDPSPEPISFDTLLQlS-S-GEYQV 159 Candidatus Solibacter usitatus
WP_011287915 118 LYFSINAVLVVRPAQEPVSFDALLQ-PtS-LQYSV 150 Dechloromonas aromatica
WP_011398024 127 LHFRIEAVLFAEPAPEEISFDSSLE-Pisaivnvq 160 Hahella chejuensis
WP_011507566 124 LQFRIEAVLSLSEASQRVAFDAVLQvN-T-RQYKV 156 Chromohalobacter salexigens
WP_011468015 127 LYLKISATLLIEPDPVPLIFDSRVR-T-Tdralkl 159 Saccharophagus degradans
WP_011137532 125 LRFRVDAVLKVHPHRPPVTFDATLQlS-S-NVYKV 157 Chromobacterium violaceum
WP_011081387 121 LKLRIKATCMIDNNEQELVMDSEVE-Pvslgikls 154 Vibrio vulnificus
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