Conserved Protein Domain Family
EcCorA_ZntB-like_u2

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cd12827: EcCorA_ZntB-like_u2 
uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family
A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
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PSSM-Id: 213361
Aligned: 178 rows
Threshold Bit Score: 151.501
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Comment:based on Thermotoga maritima CorA and on partial structures: the intracellular domains of Vibrio parahaemolyticus and Salmonella typhimurium ZntB; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                              #  ##           # #                                      
ADG83246     24 WVNLVNPtepEIQLVSKElgIEPNFLRDPLDEEEK---ARIEKEDn-----ILLIIVDIPilnie-dnecyFDTIPLGMI 94  Thermincola sp. JR
AEB29361     24 WLHLSNPtpdEINRVVKHfgFPKDYLSSVLDPDEVsrhENLELDEses-ssLAMFLYPLKissnp--ndseYVTRPLAVI 100 Carnobacterium s...
EGY80600     23 WIELINPnqqEIDEILTKykIPKDYIYSVLDDEEV---PRVEVWEsg---aANLFLLSHPikin----ncsYITRPISMI 92  Peptoniphilus in...
EIW13543     25 WINVERPtidEIDQLVDQfdLPRDYLTAVLDDAEV---SRTEQLSatdddqPVLIVMQYPklttsdlgyleFQVYPFALI 101 Lactobacillus pe...
EGF44738     23 WIRVQSPlpqELQTLATTygLPQTYVNAALDKHEN---ARVEGLDpad-kmPGLIVLRYPieitnelgfrqFNTVPLTMI 98  Lactobacillus rh...
NP_266819     4 FTYVLNPtreEIGNISEYydFPFDYLSGILDDYEN---ARFETDDn----dNNLILLQYPalsn----ygeVATFPYSLV 72  Lactococcus lact...
ZP_10279035  24 WIHVSDPseeEVNQLVKEfkFPKDYITSVLDAHEV---SRQEMLKeedtnsAILLVLQYPflieselgykeYMTYPISII 100 Carnobacterium m...
ZP_08476571  23 WVNVERPsaaEIKHLQTRfnLPVTYLTAALDDKEN---PRTEGTEqsiierPALILVRFPhesvsplgyneYTTYPFAII 99  Lactobacillus co...
ZP_10278191  23 WIHLLSPsyeEIRILSNQynFPEDYLTNVLDNDEI---AREENLNcsdtknSKLISLLYPvkqtnaqgvdlYTTRVFSII 99  Carnobacterium m...
ZP_09451134  29 WINIESPtkeDLAEISHKfnISRRFLESIFDDNEPsktFGLKSEDs-----PTMMMLSYPkytvsplgylgYNTFPIAFI 103 Lactobacillus su...
Feature 1                             #   #            #  #   #   #  ##  #  ## ##  #           #
ADG83246     95 VvddSYFVTVCLKEn---PILNEFAQNrikg-fftfKKTRFILQLLYRIATYYLRYLKQINRKTDEIEKQLhksmkNQEL 170 Thermincola sp. JR
AEB29361    101 Mt-sKTVITAAVHTp---DFISKMIENkpnfpisstNQENFLLDIAWHISSDYITYLKDINAKIEKLEDTItktskNRQL 176 Carnobacterium s...
EGY80600     93 Mv-dGILITVSTENl---KLINKVKNSyeek-glgeDSESLSTEIAWAICSEFVKSVRELNESIEKIEKTVlknsdEKAF 167 Peptoniphilus in...
EIW13543    102 Lv-dQVVLTVSNYSa---SFIQDFVMDpessklsldNHEDFVLAIMWYIEHSFVTALNLINKRTTTLESHLnqathNAEL 177 Lactobacillus pe...
EGF44738     99 Ll-aDRVITIMQHPl---RAFDDLAAQpl-----ssKPEEFALEVLWLVLHQFVIDMDQLNDETKQIEGSLgkaakNTQL 169 Lactobacillus rh...
NP_266819    73 WtknESVILALNHEidngLIFEREYDYk-------rYKHQVIFQVMYQMTHTFHDYLRDFRTRRRRLEQGIknstkNDQI 145 Lactococcus lact...
ZP_10279035 101 Lt-dHTIITASKHLp---QFISEITHNnpnfavdttHQEQFVLRLFWYISASYMRFLQEIDIETRRLELQLtqstkNEQL 176 Carnobacterium m...
ZP_08476571 100 Lt-aEVLITVCNHPa---VFIQDFLFHqpql--ninNHERFTLKLVWFIHKSYLNCLDENSHTMDTMEKNLtiateNNDL 173 Lactobacillus co...
ZP_10278191 100 Lt-dSVIISASEINp---NFFNQLLTNnndylvdleNHQSFVLEVAWLTSHDYICCLKKIHESIDLLEKDVaksmeTHHL 175 Carnobacterium m...
ZP_09451134 104 Iv-dQIVITIANHPa---SCIQNFILHktalnqiisNPQLFLTHMLWFITHDFVLAMNDISSQMEELEIQLtsatkNEQI 179 Lactobacillus su...
Feature 1       # ##  ##  ## ##   # ##  ##  ##           ## ##  ## ##  ## ## ###  ######## #####
ADG83246    171 FSLLNLEKSLVYFTTSLRANEIVMEKLLRGgflk-mypeDEDLMDDTIIENKQAIEMGHIYSNILSGMMDAFASVISNNL 249 Thermincola sp. JR
AEB29361    177 FVLMSLQKSLVYFSTAIESNHPIFKRLKAIerfn-tnknILSFLHDVVIENQQAEAMIRQSNKMLEQISAIFSSVISNNL 255 Carnobacterium s...
EGY80600    168 SDMIVIQKSLIKFSMATRENGPVIEKMFESyskl-ksdkASELLHDLLVENKQARVMIEESTTIMENLSDLYSNLISHKL 246 Peptoniphilus in...
EIW13543    178 FRIMSYQKSLIRFKAALQQNGPTLDAIESSvgyf-taahHQSLTADIKIETQQASDMTDTTNQILQQYSQLVGSVISNNL 256 Lactobacillus pe...
EGF44738    170 YQLMAMQKSLVFFDAALEHSGNLLKSLRAGerff-taagYLRRLHDVEVEVVEAQTMVRITNKLLEQYSTAVSAIVSNNL 248 Lactobacillus rh...
NP_266819   146 VDLIAIQASLIYFEDALHNNMQVLQDFIDYlred-dedgFAEKIYDIFVETDQAYTETKIQLKLLENLRDLFSNIVSNNL 224 Lactococcus lact...
ZP_10279035 177 YALMSLQKSLIYFSTAINSNGPIFDIMKETdrfs-kderTRSFLHDVIVENNQAQIMTSQYQKILDQVSTVFSAVVSNNL 255 Carnobacterium m...
ZP_08476571 174 FQLTAMQKSLIHFQWALRKNRQLLTQLQASefyf-etapFSELLSDILIESEQAATMTAQQKQIIDEYNTTVSAIVSNNL 252 Lactobacillus co...
ZP_10278191 176 FKLLNFKKSLVYIGSGTESNHPILEKIKSLeffi-qnkgNRKLLHNMTNENKQSEMMIKQYNKLLEQIGDLFSSIISNRL 254 Carnobacterium m...
ZP_09451134 180 YQIMAMQKTLIDFDSSLTQNEDVLTEFDKSdllassnehINKLNRSTLIENKQALSMCHDRSKILDQYSNMVSAVVSNNL 259 Lactobacillus su...
Feature 1       ######## ### ###### ########          ##  ##            #  #   
ADG83246    250 NMVMKFLTSITIVLAIPTMVASFFGMNVSLPFQNNEHAFTFIILLTlfvSFATTLILAKRKLF 312 Thermincola sp. JR
AEB29361    256 NNIMKVLTSITIVLTIPNIIGALWGMNVTLPFEDTPGAFWILCFISlaiCVLTVWILRKKDYF 318 Carnobacterium sp. 17-4
EGY80600    247 NVVMQVLTSITIVMTVPTIVGGLWGMNVKLPIENHPAAFWILVLLSmviSWYIVRILKRKGYL 309 Peptoniphilus indolicus ATCC 29427
EIW13543    257 NDVMKFLTSLTMVLTIPTIIGGIYGMNVKLPGASLVHAFTWIMAGTivlCIISIEYLRNHDYF 319 Lactobacillus pentosus KCA1
EGF44738    249 NLIMKVLTSLTIILTIPTIVGGIYGMNVRLPFENAYWAFWWLIGGTavlCGLAAWWLWRKDYF 311 Lactobacillus rhamnosus MTCC 5462
NP_266819   225 NIVMKIMTSATFVLGIPAVIVGFYGMNVPIPGQNFNWMVWLILVLGillCVWVTWWLHKKDML 287 Lactococcus lactis subsp. lactis ...
ZP_10279035 256 NNIMKILTSITIVLTIPTILGGIYGMNVEIPFIDTPGAFWLIMVIMiisSVLTVWLLKKKDFF 318 Carnobacterium maltaromaticum ATC...
ZP_08476571 253 NIIMKVLTSITIILTIPTIIGGIYGMNVHLPGASSARAFTFIILGTivvSWLAAWWLRRRNFF 315 Lactobacillus coryniformis subsp....
ZP_10278191 255 NNLMKVLTSMSIILTIPSIIGALWGMNVSLPFEKNPIAFWLLICGSlmiSLGVAFLLRKKKYM 317 Carnobacterium maltaromaticum ATC...
ZP_09451134 260 NDVMKILTSITIILTIPTIIGGIYGMNVSLPGAQIASAFTWLMIIIiviCLVTRHVLKKHNYM 322 Lactobacillus suebicus KCTC 3549

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