3EC1


Conserved Protein Domain Family
GTPase_YqeH

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TIGR03597: GTPase_YqeH 
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ribosome biogenesis GTPase YqeH
This family describes YqeH, a member of a larger family of GTPases involved in ribosome biogenesis. Like YqlF, it shows a cyclical permutation relative to GTPases EngA (in which the GTPase domain is duplicated), Era, and others. Members of this protein family are found in a relatively small number of bacterial species, including Bacillus subtilis but not Escherichia coli. [Protein synthesis, Other]
Statistics
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PSSM-Id: 213834
Aligned: 21 rows
Threshold Bit Score: 333.818
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EC1_A         7 CIGCGAAIQFENPKNAGYAPKSVL------EKd----aEEVICQRCFRLKHYNEVQDV-PLD-DDDFLSMLHRIGE---- 70  Geobacillus ste...
WP_011544078   7 CIGCGAALQSQDKQLPGYLPASALakvengER------EEVYCQRCFRLRHYNEIMPV-SLD-NDDFLALLNTMAE---- 74  Lactobacillus d...
WP_011162329   7 CIGCGSILQDQDPKKSGYLPSSAL------KKalesddNEVYCQRCFRLRHYNEIMPV-EEN-NDDFLALLNSISQ---- 74  Lactobacillus j...
WP_001832784   7 CIGCGAPLQSENKDAPGYVPEHNM------FR------EDVICRRCFRLKNYNEVQDV-GME-SEDFLNLLTGLSE---- 68  Staphylococcus ...
WP_004080778   3 CPGCGAAIQFDDPKKPGYIPREVF------EKrle-egKEILCQRCFRMKHYGKLEPV-E-F-DWDFKNQLKSYLG---- 68  Thermotoga
WP_011016880   5 CVGCGVELQNTDKNLQGYTPKPIN------TK------EDMYCQRCFQLKHYGKYSVN-KMT-REDYKKEVGKLLD---- 66  Fusobacterium n...
WP_011387299   4 CLGCGSLLQTTNKFEQGYVNDS----------------EHAYCLRCFKIKNYNQLVDS-EIN-DKQFINKISTLVK---- 61  Mycoplasma capr...
WP_011183248   4 CIGCGILKQNKDQNKPGYVIKP----------------ENEYCLRCFKIKNYNELINQ-EIN-AEQFILKLKTLIQndkp 65  Mesoplasma florum
WP_006688742   7 CKGCGAFL-NDQINTIGYTPKIN-------ET------KTNLCQRCFKLIHYNKLEKV-STNlNQSIKETINTLNF---- 67  Ureaplasma parvum
WP_011113664   5 CVGCGNYL-STDPNDLGYCLDI---------S------KFELCKRCFQFKHYKKIDQKlTVK-KADIENYLNSLVL---- 63  Mycoplasma gall...
3EC1_A        71 SKAL----VVNIVD----IFDFNGSFIPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRWMRRMAEELGLC--PVDVCL 140 Geobacillus ste...
WP_011544078  75 KKAL----IVNVVD----LFDFSNSLISSLKRFVGTNDFILVGNKLDLFPKNSKESKIKDWMRQEANRMGLY--PKDIFL 144 Lactobacillus d...
WP_011162329  75 KKAL----VVNVVD----LFDFSNSLISSIKRFIGGNEYILVGNKVDLFPKNSKESKIKDWMRQEANRNGLK--PEKIFL 144 Lactobacillus j...
WP_001832784  69 KKGI----IVNVVD----VFDFEGSFINAIQRIVGNKKIILVANKIDLLPKQINHRRVKEWLRKSARKYGLE--AEDVVL 138 Staphylococcus ...
WP_004080778  69 GFDV----VVWVID----IFDFEGTYREDIAEILKGKRVIYVINKIDLLPRAVTVKEIKEWVKKRIKTKNTD----DIRI 136 Thermotoga
WP_011016880  67 DVKL----VIAVFD----IIDFEGSFDVEILDILREKDSIVIVNKLDLIPDEKHPSEVANWVKNRLAEESIV--PLDIAI 136 Fusobacterium n...
WP_011387299  62 NNKNnnlvFYYVLD----IFDLFGSRILEIENLIKDFKVILVVNKIDILPKSVKLEKIRNYINNIFKNSSLK--NVEIFL 135 Mycoplasma capr...
WP_011183248  66 KDIE----FFYIID----IFDLEGSRVKEIEEAIKRYPVTIVVNKIDLLPKAVKLAKIRRYITDLFAKSAIY--DANIIL 135 Mesoplasma florum
WP_006688742  68 SNLQ----IFAVLD----ILDLEHTIIDELKEY--QNKIIFLVNKIDLLPQRYNSELVNENVVKTLINHGFI--DPKIIY 135 Ureaplasma parvum
WP_011113664  64 DNYC----VFYLVDptnfIFDLE-----MIKRSMNANQFYLIFNKIDYLAKKNNLSVIKSRLVDNFKDHGINfsPNQILF 134 Mycoplasma gall...
3EC1_A       141 VSAAKGIGMAKVMEAINRYRE-G-G-DVYVVGCTNVGKSTFINRIIEEATGKGN-VITTSYFPGTTLD--MIEIPL-ESG 213 Geobacillus ste...
WP_011544078 145 ISAAKKKKLDTLIDYLNKHSQ-D-Q-DVYFVGTTNVGKSTLINAIIDEMGDVQD-LITTSRFPGTTLD--QIEIPL-DNG 217 Lactobacillus d...
WP_011162329 145 VSAAKKKNLDELMAFLAKKGE-K-K-DIYFVGTTNVGKSTLINAIINMNSDLKD-VITTSKFPGTTLD--EIKIPL-SNG 217 Lactobacillus j...
WP_001832784 139 ISANKGWGIDELLQSINHVRN-K-D-DVYIVGTTNVGKSTLINKLIEQSVGEKD-VVTTSRFPGTTLD--MIDIPL-DEK 211 Staphylococcus ...
WP_004080778 137 VSAEKNFGLTSLVKYLSRLTD-----KALVVGVTNVGKSSLLNKICTHEN-------TISPFPGTTLG--ILKRKVkEAN 202 Thermotoga
WP_011016880 137 VSTKNGYGVNGVFRKIKHFYPdG-V-NAMVIGVTNVGKSSVINRLLG-----KK-IATVSKYPGTTIKntLNMIPF--TN 206 Fusobacterium n...
WP_011387299 136 TSANKINLVEPLLNKVIKN-N-K-N-QQYFIGASNVGKSSLINKMLEINQLIPS--IVVSKFFNTTLD--FIEIQL-DKN 206 Mycoplasma capr...
WP_011183248 136 NTSFKNNFTNSLLNK--IKKT-K-T-KKYFIGSSNVGKSSIINSLLRTNNLIPQ--IVESKYFNTTLD--FIQIKL-SSD 205 Mesoplasma florum
WP_006688742 136 VSTHSNTSLKKVMDYIKNATN-K-KqKSIFFGKSNVGKSSLINALLALNKIKTK--LTISSYTNTTIN--LNKINI--QE 207 Ureaplasma parvum
WP_011113664 135 NSIYLTYDLRKIDRLMKKAYE-KrK-KAIFLGQSNVGKSSLINKLLKLNNIDKKlALTTSPYLNTTLQ--INQIKR--RD 208 Mycoplasma gall...
3EC1_A       214 ATLYDTPGIINHHQMAHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLD-YIK--G--G--RRSFVCYMANELT 286 Geobacillus ste...
WP_011544078 218 HFLVDTPGILTDKQLASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRID-YLK--G--P--STSFTIYAARGMY 290 Lactobacillus d...
WP_011162329 218 HYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFD-YVD--G--P--SAGFTIYVARDLY 290 Lactobacillus j...
WP_001832784 212 SFMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARID-YVS--G--G--KRPLVCFFSNDLN 284 Staphylococcus ...
WP_004080778 203 LYLYDTPGIMTSDRILDLLDPECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFD-IHF--EteK--NPIFLLFSSKEVT 277 Thermotoga
WP_011016880 207 IGLYDTPGLIPEGRASDLVCDNCAQKIIPSGEISRKTFKAKHNRMIMIGNLVKFK-ILN--N--DeiKPIFSIYAAKDVQ 281 Fusobacterium n...
WP_011387299 207 TTIFDSAGVSRKNSIANLMNKRFQSYCYFKKEIQQFTYQLTNNNSIFFSGVCWFD-YISlnN--Q--KTSFHIYTNKEIN 281 Mycoplasma capr...
WP_011183248 206 DIIFDTPGIARSNSAANLLDKEDWKYIYFNKEVAQNTFQLKPFNSIFYAGIAWVD-FEW--EsdE--INSFHFFNNKEIK 280 Mesoplasma florum
WP_006688742 208 HQILDAPGVCFDENILNYVRDEDNKSIMISYGAKAINYQINPQQALMISGLVGIQ-YLK--G--Q--KTTFTLYVSSQLD 280 Ureaplasma parvum
WP_011113664 209 FCLLDTPGYLDQTNGFFDLVPRRIKRLVSYQWKNPVTYQITSNQIFYCEDFFKLKvYLK--K--DttKTSITFYCPTALR 284 Mycoplasma gall...
3EC1_A       287 VHRTKLEKADSLYANQLGELLSPP--SKRYAAEFPPLVPRSLSV-K-Er-KTDIVFSGLGWVTCNd-P-GAQLVVHAP-- 357 Geobacillus ste...
WP_011544078 291 IHRTKTEKADEFYQKHVGELLSPP--GPN--SDLPPLKGQEYSI-K-Y--RSDVLFAGVGFITVP--E-GCVIKAYTP-- 357 Lactobacillus d...
WP_011162329 291 VHRTKTENADVFYEKHKDDLLLPP--SKED--NLGPLKGQTFSP-K-E--KSDILFGGVGFITTPa-N--VVVKAYTP-- 357 Lactobacillus j...
WP_001832784 285 IHRTKTEKANDLWKSQLGALLSPP--QDAQQFNLNDVKAVRLETgK-T--KRDIMISGLGFITId--A-GAKVIVRVP-- 354 Staphylococcus ...
WP_004080778 278 FHETRRERADELMRNRLGDLLIPP--CSKTKFENFKWKRETFTL-K-E--GEELAVAGLGWMSVRr-G-PFTVEVTVP-- 347 Thermotoga
WP_011016880 282 FHETTIEKSKEL---ELGNFFTIPcdCCKEEYNKHKKINKTLTI-N-T--GEELVFKGLAWVSVKr-G-PLNIQVTLP-- 350 Fusobacterium n...
WP_011387299 282 LHRTNTKNVIRYWNNNRKNLIPYI--SNSDQIQVYEFKFDKSHL-N-N--WYDISISGLGWINFKv-EsEMIIKINIPsd 354 Mycoplasma capr...
WP_011183248 281 LHRTNTKNAFDYYTRNKENIV-PY--NLDNNFVKREFIFNEKDI-N-K--EFEISISGLGWFNFKvkN-PMKVTINIPts 352 Mesoplasma florum
WP_006688742 281 IHRCKLENFIMNFNKRY--LLA----KFNYLNQDLEFVDHLITL-N-KdqKTNICIAGLGLLVINa-H-AEQICIRLP-- 348 Ureaplasma parvum
WP_011113664 285 IHRTSSKNEQSI-DQKLTQIFS----DLKTFSYLNNDQTNTYQI-TlN--QDNLLVNGVCLIKFNk-G-IDKVELYQK-- 352 Mycoplasma gall...
3EC1_A       358 -KGVDVFIRQSLI 369 Geobacillus stearothermophilus
WP_011544078 358 -GGIGLGTRRALI 369 Lactobacillus delbrueckii
WP_011162329 358 -EGIGLGIRRALI 369 Lactobacillus johnsonii
WP_001832784 355 -KHVDVILRNSIL 366 Staphylococcus epidermidis
WP_004080778 348 -DSVKLVVREALV 359 Thermotoga
WP_011016880 351 -EEIEISVRKAFI 362 Fusobacterium nucleatum
WP_011387299 355 qKTVLVSLNEPLI 367 Mycoplasma capricolum
WP_011183248 353 nVEVETTLRKPLV 365 Mesoplasma florum
WP_006688742 349 -KSVGLKVAKYAI 360 Ureaplasma parvum
WP_011113664 353 -DKVHTYLLKTAL 364 Mycoplasma gallisepticum
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