Conserved Protein Domain Family
YdjC_like_1

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cd10805: YdjC_like_1 
uncharacterized YdjC-like family proteins from bacteria
The subfamily contains many hypothetical proteins, and belongs to the YdjC-like family of uncharacterized proteins from bacteria. The YdjC-family is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.
Statistics
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PSSM-Id: 212116
Aligned: 27 rows
Threshold Bit Score: 297.196
Created: 26-Apr-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to Thermus thermophilus YdjC-family protein TTHB029.
  • Comment:This site has a highly negative surface charge.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ## #                                               # #                    
EEF92497      2 KIMVRADDLGYIRGVNYGIYDTVkkGVIKNIGFMV-NMPDSVEGYELVKd--lDVCLGQHTNVCIGTPIsdpklIPSLVD 78  Catenibacterium ...
EFW06582      3 QLLVQSDDYGITPGVSAGIREGIqnGIIRNTGIFI-NMPCSYQAAQDIKn--mDVCLGIDINYVCGKPVsdpklIPHLVD 79  Coprobacillus sp...
EFW05001      2 KLLIQADDYGITRAVSSGIVFGIhhGLVRNTGIFT-NMDWTEECLDMIKpyldQIDLGIDLNISTGRPIlptyqIPTLVN 80  Coprobacillus sp...
Q723Z3        3 KLIIDADDFGLSKAINHGIIESYktGITTSTLLMP-NLETAEHAIALAKdh-pDLFIGQHTNFLLGKPCtdpaeIPSLVD 80  Listeria monocyt...
EEU94900      2 KLIVRGADYAMTDSITDGCLRAArcGILTDVGLMTnNAAQARYAVNELKky-pHVSVGQDLNLVSGLPAsdpkdIPALVD 80  Faecalibacterium...
EEG57495      2 KLIVQSDDLGITEAVSCGIEKGIrdGAVTCTGLFS-NMPAAEFAVRLISpy-sHVCLGQDINLVAGRPCadpaqIPSLVQ 79  Clostridium aspa...
EEU94901      2 KLLTQSDDYGFTRGVTCGILDAIenGVVRNTGLFV-NMPESEHAASFIQdy-pQVCFGIDFNIVSGDPVsdpelLPDLVD 79  Faecalibacterium...
EEF69521      6 RCLVKADDYGFTEAISLGILKAYreGIVRSTGVMV-NMPAAPAALGWLRea-eGLCLGLHINIVVGKPAadpalIPNLID 83  Holdemania filif...
EEF67378      2 RLIVKGDDLGWTDGVNAGFEKAArdGILTAAGAMP-NMPAFERGIQLLApy-rHVSLGQHTNFVSGFPVsdpsrIPHLLN 79  Holdemania filif...
ZP_03636554   3 KLLFQSDDYGLTDSVADGILKGIdqGIIRNTGLFV-NMPSSARAAEKIRdr-qGICVGIDINLVAGQPVsdpaeVPSLVN 80  Holdemania filif...
Feature 1                                                                # # #                  
EEF92497     79 ENGQFKSsrtyr-------------qskedFVVLEEAIIEIEAQYERFKEItHQEPSYFEAHAVASdn--llKGIEIVAK 143 Catenibacterium ...
EFW06582     80 ENGDFYKstdisqkhkivsyenlittfeidPYPYHEIYLETENQVKRFIEIiGRLPEYIHPHSLLTpn--tyKAAQKIAQ 157 Coprobacillus sp...
EFW05001     81 QEGIFLTswesrkrd--------efcedknHASMDEVYQEFEAQIQRFIELvGKKPDYIHGHAYTTem--icQVQRALSQ 150 Coprobacillus sp...
Q723Z3       81 ENGEFHRskyyr-------------anpelKFQYEDVRTETIAQMERFKALtGHYPEHIDCHSIGDet--vdQAFFDIAR 145 Listeria monocyt...
EEU94900     81 ENGIFISstrrk-------------lenlyEIPYDQIYREMKQQVENFIEIvGRKPCYFAGHSLSTpe--veQAMVDIAE 145 Faecalibacterium...
EEG57495     80 GDGFFKTsgmhrtkd--------aadgnqdHVILQDCLIEVEAQIRRFIDLtGKKPEYLHSHSYSTpa--twRAMEIMGE 149 Clostridium aspa...
EEU94901     80 QDGHFIRstvkmad---------prfgkeeLWPYEQVLTELRAQLKHFVRLaGQPPEYLHGHSISRsspayiRAIRTLSE 150 Faecalibacterium...
EEF69521     84 EQGVFHSskkyrae---------laagrdpIPDLDQAVAEVEAQIRRFIALtGRRPEYLEGHAVRSph--llEAMALLAK 152 Holdemania filif...
EEF67378     80 AQGQFLStryirsl---------dqskgdpMPYYEEYFYEIEAQVLKFIKVvGRKPAYLEGHAVGTqs--seRAVDDVAE 148 Holdemania filif...
ZP_03636554  81 PEGHFVPsvqrmregriigrqgmclcfeedPYDFEQTLLETDNQVKRFIELmGRKPDYFHGHSMATpn--tqRAARAIAE 158 Holdemania filif...
Feature 1                                                                                       
EEF92497    144 RHNLKfndi-------------sfdGTPVDLAg--eKLYMHMESMKeg------yDPFKSFKEMVena-----hddGCDL 197 Catenibacterium ...
EFW06582    158 KYGIYhs-----------------mDMMLHYPclptTFMGTKGSNLq-------dQIDIDITKHLleddlpvlknnQTYY 213 Coprobacillus sp...
EFW05001    151 KYGIPytsdi----------wdklfGFDISGYr--iPWYIKPATLEnqinsslsqYLLNHKNELLq---------kEYCL 209 Coprobacillus sp...
Q723Z3      146 EFGIHttlkysgdkkwpdqegylpiTKLLESGa--lPYTNGGVSIE---------NFLNDDFGLLkla------pnEIAE 208 Listeria monocyt...
EEU94900    146 EYGVLlncfglk-------dlpvgtRWYYKNMkv-dPNDRKPSYGLa-------eQGATDVIGHIlsggcefdfnaPYAM 210 Faecalibacterium...
EEG57495    150 TYGIPlvrd-------------llaRYNVSRLa--sSWNKKPFTLEeqm----kaDPMECILGDRefp------kkPIGF 204 Clostridium aspa...
EEU94901    151 ESGVPysad------------chkkVNMYWAAn---GYNTKPFTVEkql----etDALAYVREHLdea-----lghEYVL 206 Faecalibacterium...
EEF69521    153 RYDLPhlsy------------lencDHRLTERpq-rAASIYPFYDQg-------vEPAAYFTEDLggi-----aelPLSL 207 Holdemania filif...
EEF67378    149 KYDIIhichdgtnpyglfcaklgkyAMDIFKTa--dQFEQYTCSPEq--------AILEDQFGILg---------hETAQ 209 Holdemania filif...
ZP_03636554 159 KYDILmttd-------------vmsGSQVSMIp--cTWTPKPFPIEdql----ktDVEQEFLKSLeas-----lshEIGY 214 Holdemania filif...
Feature 1          #                 #                             
EEF92497    198 LVCHPGYLDAQILRTSSLTLDRTKEAEMLCSEelkdylkEHDIHLYTYDEI 248 Catenibacterium mitsuokai DSM 15897
EFW06582    214 YIGHCGYIDYQLFEETTLTLRRIKDLQAMLDKdiisyihNHDIKLITYKNL 264 Coprobacillus sp. 29_1
EFW05001    210 VVGHMGYVDDELLKLSSYHLYRIKDLEGITNLevmdwvkESHISLIRYSEI 260 Coprobacillus sp. 29_1
Q723Z3      209 MHFDVGFLDQFVLDNSSYTLMRCRELATICDArvrdwllENGFELITFGDL 259 Listeria monocytogenes str. 4b F2365
EEU94900    211 LATHCGYCDGELQNMSTFSVIRGRELEALCSPkikewvkANGIELISFDQY 261 Faecalibacterium prausnitzii A2-165
EEG57495    205 IGTHCGYVDDALFGVSTYTMIRTRDLAAVTGPsmrqwirENSIELISYRDL 255 Clostridium asparagiforme DSM 15981
EEU94901    207 LGGHVGFVDADLFRYTTYSVIRCKDHEVFTSDfvknwilRNNVELITYRDL 257 Faecalibacterium prausnitzii A2-165
EEF69521    208 VTLHPGYLDREIYRMSSFTDVRIKDLEAATAPevkawfaKKDIALISFRDI 258 Holdemania filiformis DSM 12042
EEF67378    210 IFFHPGFVDADIFDASSFNGVRMRDVQALCSPavkqwidDHKIELINYCDL 260 Holdemania filiformis DSM 12042
ZP_03636554 215 FICHCGFVEEDLMKETTYTMIRMKDLAMATSPkvraflqEHQIELITYRDL 265 Holdemania filiformis DSM 12042

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