Conserved Protein Domain Family
PRK05559

?
PRK05559: PRK05559 
DNA topoisomerase IV subunit B; Reviewed
Links
?
Statistics
?
PSSM-Id: 235501
Aligned: 685 rows
Threshold Bit Score: 736.525
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
296129899   3 TTSPQAGYTARHLSVLEGLEAVRKRPGMYIGTTDSRGLMHCLWEIIDNSVDEALGGHGDRIEVVLHADSSVEVRDNGRGI 82 
157803444  13 IKLVNNSYSAKDIEVLEGLEPVRKRPGMYIGGIDSSAMHHLVSEVLDNAMDEAVAGYASIITIKMHQDHSITIFDNGRGI 92 
157825436  13 NKLVDNNYSAKDIEVLEGLEPVRKRPGMYIGGTDSNAMHHLVSEVLDNAMDEALAGFASIITIKMHQDHSITIFDNGRGI 92 
157828185  13 NKLVDNNYSAKDIEVLEGLEPVRKRPGMYIGGTDSNAMHHLVSEVLDNAMDEAVAGFASIITIKMHHDHSITIFDNGRGI 92 
157827616  13 PKIINNTYSAKDIEVLEGLEPVRKRPGMYIGGTDLNAMHHLVSEVLDNSMDEAVAGFASIITIKMHQDHSITISDNGRGI 92 
157964294  13 NKLVDNNYSAKDIEVLEGLEPVRKRPGMYIGGTDSNAMHHLVSEVLDNAMDEAVAGFASIITIKMHHDHSITIFDNGRGI 92 
165932887  13 NKLVDNNYSAKDIEVLEGLEPVRKRPGMYIGGTDSNAMHHLVSEVLDNAMDEAVAGFASIITIKMHHDHSITIFDNGRGI 92 
238650411  13 NKLVDNNYSAKDIEVLEGLEPVRKRPGMYIGGTDSNAMHHLVSEVLDNAMDEAVAGFASIITIKMHHDHSITIFDNGRGI 92 
67459380   13 NKLVDNNYSAKDIEVLEGLEPVRKRPGMYIGGTDSNAMHHLVSEVLDNAMDEAVAGFASIITIKMHQDHSITIFDNGRGI 92 
91205045   13 TKIINNTYSAKDIEVLEGLEPVRKRPGMYIGGTDLNAMHHLVSEVLDNSMDEAVAGFASIITIKMHQDHSITISDNGRGI 92 
296129899  83 PVDVEPK-TGLTGVEVVLTKLHAGGKFGGGSYAASGGLHGVGASVVNALSARLDVEVDRNGRTHRMTFHrGepGVFddsa 161
157803444  93 PIDNHPKfPDKSALEVILTTLHSGGKFSNNVYHTAGGLHGVGISVVNALSKHLDVKVYKQGKLYSQSYS-K--GEK---- 165
157825436  93 PIDNHPKfPDKSALEVILTTLHSGGKFSNNVYHTAGGLHGVGISVVNALSKHLEIKVYKQGKLYSQSYS-Q--GKK---- 165
157828185  93 PIDNHPKfPDKSALEVILTTLHSGGKFSNNVYHTAGGLHGVGISVVNALSKHLEIKVYKQGKLYSQSYS-K--GEK---- 165
157827616  93 PIDNHPKfPNKSALEVILTTLHSGGKFSSNVYQTAGGLHGVGVSVVNALAEHLEIKVYKQGKLYKQSYA-K--GEK---- 165
157964294  93 PIDHHPKfPDKSALEVILTTLHSGGKFSNNVYHTAGGLHGVGISVVNALSKHLEIKVYKQGKLYSQSYS-K--GEK---- 165
165932887  93 PIDNHPKfPDKSALEVILTTLHSGGKFSNNVYHTAGGLHGVGISVVNALSKHLEIKVYKQGKLYSQSYS-K--GEK---- 165
238650411  93 PIDNHPKfPDKSALEVILTTLHSGGKFSNNVYHTAGGLHGVGISVVNALSKHLEIKVYKQGKLYSQSYS-K--GEK---- 165
67459380   93 PIDNHPKfPDKSALEVILTTLHSGGKFSNNVYHTAGGLHGVGISVVNALSKHLEIKVYKQGKLYSQSYS-K--GEK---- 165
91205045   93 PIDNHPKfPNKSALEVILTTLHSGGKFSSNVYQTAGGLHGVGVSVVNALAEHLEIKVYKQGKLYKQSYA-K--GEK---- 165
296129899 162 gvspespfepfvQGSElAVVGKVgkGVTGTRVRYWADRQIFpKTAVFSYDELVTRARQTSFLVPGLAITVRDE------- 234
157803444 166 ------------LTGL--ICEEApkRLRGTSINFTPDPEIFgEKLHFNPKKIYELARSKAYLYRGVTIEWECEvevssdi 231
157825436 166 ------------LTDL--ICEESykRLRGTSINFTPDPEIFsEKLHFNPKKIYELARSKAYLYRGVTIEWECEvevlsdi 231
157828185 166 ------------LTDLiCEEASTrlR--GTSINFTPDPEIFsETLHFNPKKIYELARSKAYLYRGVTIEWVCEvev---- 227
157827616 166 ------------LTEL--ICEEApkRLKGTSINFIPDPEIFgDKIHFNPKKVYELARSKAYLYRGVTIEWECEiea---- 227
157964294 166 ------------LTDL--ICEEAskRLRGTSINFTPDPEIFsEKLHFNPKKIYELARSKAYLYRGVAIEWVCEvevpsdi 231
165932887 166 ------------LTDLiCEEAST--RLRGTSINFTPDPEIFsETLHFNPKKIYELARSKAYLYRGVTIEWVCEvevqsdi 231
238650411 166 ------------LTDL--ICEEAskRLRGTSINFTPDPEIFsEKLHFNPKKIYELARSKAYLYRGVTIEWVCEvevqsdi 231
67459380  166 ------------LTDL--ICEEAskRLRGTSINFTPDPEIFsEKLHFNPKKIYELARSKAYLYRGVTIEWECEvevpsdi 231
91205045  166 ------------LTEL--ICEEApkRLKGTSINFIPDPEIFgDKIHFNPKKVYELARSKAYLYRGVTIEWECEieassdv 231
296129899 235 --RGipgtpgehgpheeTFLHTGGVLDFVDHLAPDapvTDTWHlt-----gsGTFTETvpvldsrghmtpqevTRDCEVD 307
157803444 232 pkKA-------------LINFPNGLKDYLSSKITL---DNLITqei----fsGNIESK---------------PDGVILE 276
157825436 232 pkKA-------------LINFPNGLKDYLSSKITL---DNLIIpei----fsGNVEST---------------PDGIKLE 276
157828185 228 -qsDipk--------kaLISFPNGLKDYLSSKITL---DNLVIpgi----faGNIEST---------------SDRIKLE 276
157827616 228 -ssDvpk--------kaLINFPNGLKDYLSSKITP---DDLITtei----fsGNVESE---------------QDGIKLE 276
157964294 232 pkKA-------------LISFPNGLKDYLSSKITL---DNLVIpgif-agniGSTPDR------------------IKLE 276
165932887 232 pkKA-------------LISFPNGLKDYLSSKI-------TLDnlvipgifaGNIEST---------------SDRIKLE 276
238650411 232 pkKA-------------LISFPNGLKDYLSSKI-------TLDnlvipeifaGNIEST---------------PDRIKLE 276
67459380  232 pkKA-------------LINFPNGLKDYLSSKITL---DNLIIpeif-sgniESTPDE------------------IKLE 276
91205045  232 pkKA-------------LINFPNGLKDYLSSKITP---DDLITtei----fsGNVESE---------------QDGIKLE 276
296129899 308 VAVRWGTGYAT-EVRSFVNIISTPKGGTHLAGFETALLKTLRTQVTAnarrLKISAkdsSSERLEKEDVLAGLTAVVTVR 386
157803444 277 WAICWQNNDNSaFIQSYCNTVPTPQGGTHEQGLKSAILRGLKTYGEMi--gNK------KAANLTIEDILETASVVLSIF 348
157825436 277 WAICWQNNDNSaFIQSYCNTVTTPQGGTHEQGLKSAILRGLKAYGEMi--gNK------KAANLTIEDILETACVVLSIF 348
157828185 277 WAICWqnNDSSaFVQSYCNTVPTPQGGTHEQGLKSAILRGLKAYGEM-----IGNK---KAANLTIEDILETTSVVLSIF 348
157827616 277 WAICWQNNDSSaFIQSYCNTVPTPLGGTHEQGLKSALLRRLKAYGEMv---GNK-----KTANLAIEDILETASVVLSIF 348
157964294 277 WAICWQNNDSSaFIQSYCNTVPTPQGGTHEQGLKSAILRGLKAYGEMi--gNK------KAANLTIEDILETASVVLSIF 348
165932887 277 WAICWQNNDSSaFVQSYCNTVPTPQGGTHEQGLKSAILRGLKAYGEMig-nK-------KAANLTIEDILETTSVVLSIF 348
238650411 277 WAICWQNNDSSaFVQSYCNTVPTPQGGTHEQGLKSAILRGLKAYGEMig-nK-------KAANLTIEDILETTSVVLSIF 348
67459380  277 WAICWQNNDNSaFIQSYCNTVPTPQGGTHEQGLKSAILRGLKAYGEMi--gNK------KAANLTIEDILETASVVLSIF 348
91205045  277 WAICWQNNDSSaFIQSYCNTVPTPLGGTHEQGLKSALLRGLKAYGEMv--gNK------KTANLAIEDILETASVVLSIF 348
296129899 387 LAEPQFEGQTKEVLGTGPVRGIVAKVVESELTALFSsskrEHKAHTALLLDKVVGEMRARVS-------ARKQKEisrRK 459
157803444 349 ISEPSFQGQTKEKLVSQGVSKPVENIIKDHFDHFLS----SNKALATNLLEHVIAIAEFRISkkn-tknISRKNAt--QK 421
157825436 349 IAEPSFQGQTKEKLVSNGVSKPVENIIKDHFDHFLS----SDKALATNLLEHVIAIAEFRISkkn-eknISRKNAt--QK 421
157828185 349 IAEPSFQGQTKEKLVSNGVSKPVENIIKDHFDHFLS----SDKALATNLLEHVISIAEFRISkkn--eknISRKNa--T- 419
157827616 349 IAEPTFQGQTKEKLVSQGVSKPAENIIKDHFDHFLS----SNKTIANNLLEHFIAIAEFRLNkkn--ektISRKNa--T- 419
157964294 349 IAEPSFQGQTKEKLVSNGVSKPVENIIKDHFDHFLS----RDKALATNLLEHVISIAEFRISkkn-eknISRKNAt--QK 421
165932887 349 IAEPSFQGQTKEKLVSNGVSKPVENIIKDHFDHFLS----SDKALATNLLEHVISIAEFRISkknekniSRKNAT---QK 421
238650411 349 IAEPSFQGQTKEKLVSNGVSKPVENIIKDHFDHFLS----SDKALATNLLEHVISIAEFRISkknekniSRKNAT---QK 421
67459380  349 IAEPSFQGQTKEKLVSNGVSKPVENIIKDHFDHFLS----SDKALATNLLEHVIAIAEFRISkkn-eknISRKNAt--QK 421
91205045  349 IAEPTFQGQTKEKLVSQGVSKPAENIIKDHFDHFLS----SNKTIANNLLEHFIAIAEFRLNkkn-ektISRKNAt--QK 421
296129899 460 NAlesssLPAKLADCRIDDVSRSELFIVEGDSALGTAKLARSSDFQALLPIRGKILNVQKASVGDMLKNAECAAIIQVVG 539
157803444 422 LR-----LPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSRLEKIVNNQAIQDLEIALA 496
157825436 422 LR-----LPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
157828185 420 -Qkl--rLPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
157827616 420 -Qkl--rLPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
157964294 422 LR-----LPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
165932887 422 LR-----LPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
238650411 422 LR-----LPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
67459380  422 LR-----LPGKLADCTRTTPGGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
91205045  422 LR-----LPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLEKIVNNQAIQDLEIALA 496
296129899 540 AGSGRTFDLEAARYGKIVLMTDADVDGAHIRTLLLTLFFRYMRPLVEDGRVYAAVPPLHRIEVigAGSRkneyLYTYSEA 619
157803444 497 CGSLKNYKEENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEKGHLYLAKPPLYRLTQ--SNKT----YYAADEE 570
157825436 497 CGSLKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQ--SNKT----YYAGDEE 570
157828185 497 CGSLKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQ--SNKTy----YAGDEE 570
157827616 497 CGSMKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEDGHLYLAKPPLYRLTQ--SNKT----YYANDEE 570
157964294 497 CGSLKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQ--SNKT----YYAGDEE 570
165932887 497 CGSLKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQ--SNKT----YYAGDEE 570
238650411 497 CGSLKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQ--SNKT----YYAGDEE 570
67459380  497 CGSLKNYKEENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQ--SNKT----YYAGDEE 570
91205045  497 CGSMKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEDGHLYLAKPPLYRLTQ--SNKT----YYANDEE 570
296129899 620 ELAATLKKLdrAGRRYKDDIQRYKGLGEMDADQLAETTMDPRHRTLRRVRIGEAEAAaaqvEKVFELLMGSDVAPRKDFI 699
157803444 571 EKARLTDKLs-KTSKAQIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDFQNV----DKIVDDLMGKKPEKRFQFI 645
157825436 571 EKAKLMGKLs-KASKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLNVTLEDFQNV----DKIVDDLMGKKPEKRFQFI 645
157828185 571 EKAKLTDKLlk-aSKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLeDVQNV----DKIVDDLMGKKPEKRFQFI 645
157827616 571 EKAKLTDKLs-KSSKAKIEVGRFKGLGEMMPMQLKETTMHPEKRSLLKVTLEDFQNV----DKIVDDLMGKKPEKRFQFI 645
157964294 571 EKAKLTDKLl-KASKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDFQNV----DKIVDDLMGKKPEKRFQFI 645
165932887 571 EKAKLTDKLl-KASKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDVQNV----DKIVDDLMGKKPEKRFQFI 645
238650411 571 EKAKLTDKLl-KASKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDFQNV----DKIVDDLMGKKPEKRFQFI 645
67459380  571 EKAKLTDKLs-KASKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDFQNV----DKIVDDLMGKKPEKRFQFI 645
91205045  571 EKAKLTDKLs-KSSKAKIEVGRFKGLGEMMPMQLKETTMHPEKRSLLKVTLEDFQNV----DKIVDDLMGKKPEKRFQFI 645
296129899 700 VANA--------HALDAS 709
157803444 646 YEQAlv----kmDKIIND 659
157825436 646 YEQAlv----kmDKIINE 659
157828185 646 YEQA--------LVKMDK 655
157827616 646 YEQA--------LVKMDK 655
157964294 646 YEQAlv----kmDKIISE 659
165932887 646 YEQAlvkmdkiiSELDI- 662
238650411 646 YEQAl------vKMDKII 657
67459380  646 YEQAlv----kmDKIINE 659
91205045  646 YEQAlv----kmDKIINE 659
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap