Conserved Protein Domain Family
PIN_3

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pfam13470: PIN_3 
PIN domain
Members of this family of bacterial domains are predicted to be RNases (from similarities to 5'-exonucleases).
Statistics
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PSSM-Id: 463888
Aligned: 52 rows
Threshold Bit Score: 40.4001
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015865219       12 KVFIDTTILC-----GALRVDG----VNRKILKAAr----FPHLFQPIVSRVCLFEFIRNAsqglgkgDKRVVYNQQEIE 78  Parageobac...
Q218X4              3 IVVPDVNVLVsranaDRAGRSSt---ISQKVVQQLvsgvlNGEPVQLAMSFKMLDTYRDVL-------LRKGYDREAVEQ 72  Rhodopseud...
AHJ27011            3 RVLFDSDVLL-----DILAERQpfiiASAQALNTV-----ITKQVQGFVSGHGVTNIFYIL--------RRQIGSEAARK 64 
Q7NI83              4 VVLYDTNVLL-----DIVLVRQpyyrDSLLAVDAA-----SSERISGYIAGHAPTTLFYVL--------KKQVGAPQARR 65  Gloeobacte...
jgi:Veis_0177       3 AVLFDTNVVL-----DVLLDREphvhASAQAMALV-----ERGEVRGFLCATTVTTLFYLA--------SRALDARRARG 64 
Q2S282              2 TICFDTNVIL-----DGVLQRTpyqqAATGLIHAV-----ERGDLTGQLCATTVTTVYYFV--------QKRYDGPAART 63  Salinibact...
Q1WR62              3 KVLVDTCVIV-----DILLNRQkfvdASYNAVSSL-----IRQGDTVYTTAKAMTDIFYIV-------HHSLHDNDKTKE 65  Lactobacil...
wucgs:EUBREC_3389   2 RILADTNVII-----DALTSREpwnkSAEEIFLMA-----ANHTIEMYITASSATDIYYLI-------RKHLHNTETAKM 64 
jgi:PCC7424_4811    2 KYLIDADVIL-----EYCLNREqfvkDTEYLWSLL-----ESQKIEGFITESGLNKIEFYF--------SQLTSDEKAKN 63 
Q73PU8              2 KVLIDTNVIL-----DVLLNRAsfvqDAIAVLEL------TCGNIQAYVSASAITDIYYIA-------YKELRDKIRVKN 63  Treponema ...
WP_015865219       79 AFLNEFLDPifqyytnlpvnslvgrysvetvirenrpigevlvelsgcDHETAKQIVSSqEMSEPlyrfDQEDFHVWITA 158 Parageobac...
Q218X4             73 SADGLIALMry-----------------------------------gpIGFDPYLVLGG-TPELSv--mDVEDGGVLATA 114 Rhodopseud...
AHJ27011           65 LIETLLQHIqi------------------------------------aSVTDEVIHQAL-HSPIK----DFEDAVTSAAA 103
Q7NI83             66 SIAHLLAHLtv------------------------------------aAVDDAGIRGAL-VSPFE----DFKDAVTAMAA 104 Gloeobacte...
jgi:Veis_0177      65 QIEALLRLFdv------------------------------------aPVTRLVLTDAL-GIGFA----DYEDAVLHEAA 103
Q2S282             64 DVRDLLHLFdv------------------------------------aPVHRAPLERAA-ESDFQ----DYEDAVLHSAA 102 Salinibact...
Q1WR62             66 VLLKLSKIYqi------------------------------------lDTKKKDTLKAI-TSDVT----DYEDAVMVETA 104 Lactobacil...
wucgs:EUBREC_3389  65 IMGKLYSLTgi------------------------------------lEVTADDCMDAL-ASAIS----DYEDAVVEKVA 103
jgi:PCC7424_4811   64 LIKDLKKLVki------------------------------------cPVDRYILDAAR-KSNLK----DFEAAVEIECA 102
Q73PU8             64 LIKTLLQIItv------------------------------------aGISDKEIMSAI-DSDWA----DFEDSLQNAVA 102 Treponema ...
WP_015865219      159 IQEeCNYILTTNHR 172 Parageobacillus galactosidasius
Q218X4            115 YAAhANLLVTDNLK 128 Rhodopseudomonas palustris BisB18
AHJ27011          104 MAAsLEIIVTRNTS 117
Q7NI83            105 VGVnAQFVCTRDLK 118 Gloeobacter violaceus
jgi:Veis_0177     104 RHAgVLCIVTRNVR 117
Q2S282            103 RTAgADGIVTRNTA 116 Salinibacter ruber DSM 13855
Q1WR62            105 ISNeVDFILTRNIK 118 Lactobacillus salivarius UCC118
wucgs:EUBREC_3389 104 SRKdMDYIVTRNIK 117
jgi:PCC7424_4811  103 IKFnCDAIIVWNYL 116
Q73PU8            103 ESHdCSMIITRNIS 116 Treponema denticola
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