Conserved Protein Domain Family
rpoH2

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PRK07500: rpoH2 
RNA polymerase factor sigma-32; Reviewed
Statistics
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PSSM-Id: 236033
Aligned: 47 rows
Threshold Bit Score: 437.545
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
298293645   1 MSDKAGRSTQIARAAMAAPLLDRTEEYELARRWAEQHDEKALHALIHAHMRLAIAIARRFRNYGLPMPDLIQEGHIGLME 80 
294676015   1 MALDGMTDDTLPRQAMRAEYLDAETEAALARAWRDHRDEAALHRLVSAYMRLAISMASKFRRYGAPMNDLIQEASLGLMK 80 
77464172    1 MALDGYTDQTMSRQAMRAELLDAETELRLAYAWRDQRDERALHRLITAYMRLAISMASKYRRYGAPMNDLIQEASLGLMK 80 
126463015   1 MALDGYTDQTMSRQAMRAELLDAETELRLAYAWRDQRDERALHRLITAYMRLAISMASKYRRYGAPMNDLIQEASLGLMK 80 
146276534   1 MALDGYTDQTMSRQAMRAELLDAQTELRLAYAWRDQRDERALHRLITAYMRLAISMASKYRRYGAPMNDLIQEASLGLMK 80 
221640041   1 MALDGYTDQTMSRQAMRAELLDAETELRLAYAWRDQRDERALHRLITAYMRLAISMASKYRRYGAPMNDLIQEASLGLMK 80 
110678526   1 MALDSTRDMALSRKAMKAELLDAETELELAYAWRDERCEKSLHRLITAYMRLAISMASKFKRYGAPMNDLIQEAGLGLMK 80 
56695321    1 MALNDPQDKRMSRQAMKAELLDAETELALAYAWRDHRDEAALHRLITAYMRLAISMAAKFKRYGAPMNDLIQEAGLGLMK 80 
89053397    1 -MAFDMGDQSLSRRAMKAELLDAETELRLAYAWRDDRCEESLHRLVTAYMRLAISMAAKFKRYGAPMNDLIQEAGLGLMK 79 
159045518   2 ALDGYSGEMSLSRRAMQAELLDAETELRLAYAWRDQRDEEALHRLITAYMRLAISMAAKFKRYGAPMNDLIQEAGLGLMK 81 
298293645  81 AASRFETTHEVRFATYASWWIRAAIQDYVLRNWSIVRGGTSSGQKALFFNLRRVRARLER-ANggaGETTREEMHRSIAE 159
294676015  81 AADKFDPDRGVRFSTYAVWWIKASIQEFVMRNWSMVRTGSTSSQKALFFNLKRVQAQIQReAEaegVVLDGAQLREKVAI 160
77464172   81 AADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSLVRTGSTSSQKALFFNMRRVQARLEReASqrgEALDAHQLREMVAH 160
126463015  81 AADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSLVRTGSTSSQKALFFNMRRVQARLEReASqrgEALDAHQLREMVAH 160
146276534  81 AADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSLVRTGSTSSQKALFFNMRRVQARLEReASqrgEQLDAHQLRELVAH 160
221640041  81 AADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSLVRTGSTSSQKALFFNMRRVQARLEReASqrgEALDAHQLREMVAH 160
110678526  81 AADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGSTSSQKSLFFNMRRVQARLEReSAasgEPLDRHQLRQMIST 160
56695321   81 AADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGSTSSQKSLFFNMRRVQARLEReAAtdgLALDRHQLHQMIAS 160
89053397   80 AADKFDPDRGVRFSTYAVWWIKASIQDHVMRNWSMVRTGSTSSQKSLFFNMRRVQARLEReAMksgDTLDKHQLRQMIAT 159
159045518  82 AADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGSTSSQKSLFFNMRRVQARLEReAAsagEPLDRHQLRQMIAT 161
298293645 160 KLGVSEIEVARMDARLNVPDLSLNAPLSFGEEDGaERMDQLVAADPLPDEQVSMEIDGERRRRWLQGALRGLNEREFRII 239
294676015 161 SIGVSMADVEMMEGRLSGSDLSLNAPQSHDEDGR-EWVDTLEDEGGSPETRVTEAHDGAKMRDWLGQAMGQLSARERYIV 239
77464172  161 DVGVPLSDVEMMEGRLSGSDFSLNATQSADDEGR-EWIDALEDDSAQAAEVVEGSLDAARLRGWLVSAMQQLNARERFIV 239
126463015 161 DVGVPLSDVEMMEGRLSGSDFSLNATQSADDEGR-EWIDALEDDSAQAAEVVEGSLDAARLRGWLVSAMQQLNARERFIV 239
146276534 161 DVGVPLSDVEMMEGRLSGSDFSLNATQSADDEGR-EWIDALEDDSAQASEVVEGSLDAERLRGWLVVAMQQLNARERFIV 239
221640041 161 DVGVPLSDVEMMEGRLSGSDFSLNATQSADDEGR-EWIDALEDDSAQAAEVVEGSLDAARLRGWLVSAMQQLNARERFIV 239
110678526 161 EIGVPLHDVEMMEGRLSGSDYSLNATQSTEDEGR-EWIDALEDDSAQAAETVEHHHDTEQLRAWLLQAMNDLNERERFIV 239
56695321  161 EIGVPLRDVEMMEGRLSGSDFSLNATQASDEEGR-EWIEALEDESEQAAELVAHRHDTEQLRDWLIEAMQALNERERFIV 239
89053397  160 EVGVPLHDVEMMEGRLAGSDYSLNATQSAEDEGR-EWIDTLEDDGEQAEHIVEHFHDTAQLRDWLIASMNALNDRERFIV 238
159045518 162 EVGVPLHDVEMMEGRLAGSDYSLNATQSTEDEGR-EWIDTLEDTGAQAAELVEQDHDIETLRGWLITAMDALNERERFIV 240
298293645 240 EARRLTEDSETLEVLGERLGISKERVRQIESRAIEKLRIALTRSPDVPAGAF 291
294676015 240 AQRRLIDEPRTLESLGEELGLSKERIRQLEAQAFSKMRKSLESRSEEVIGFF 291
77464172  240 TERKLRDVPRTLESLGEELKLSKERVRQLEAAAFAKMRRSLEAQSREVHHFL 291
126463015 240 TERKLRDVPRTLESLGEELKLSKERVRQLEAAAFAKMRRSLEAQSREVHHFL 291
146276534 240 TERKLRDVPRTLESLGEELKLSKERVRQLEAAAFAKMRRSLEAQSREVHHFL 291
221640041 240 TERKLRDVPRTLESLGEELKLSKERVRQLEAAAFAKMRRSLEAQSREVHHFL 291
110678526 240 RERKLRDAPRTLESLGQELNLSKERVRQLEAAAFGKMRKSLENQSREVLYFL 291
56695321  240 RERKLRDEPRTLESLGDELGLSKERVRQLEAAAFAKMRKSLEARSREVQHFL 291
89053397  239 RERKLREDPRTLESLGTELGLSKERVRQLEAAAFGKMRKTLEAQSKEVRSFL 290
159045518 241 RERKLRDQPRTLESLGQELGLSKERVRQLEAAAFGKMRKNLMNQSSEVRQFF 292
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