5BPX,3CJX,3EBR,3BAL,4P9G,2O1Q


Conserved Protein Domain Family
cupin_DAD

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cd20302: cupin_DAD 
2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain
2,4'-Dihydroxyacetophenone dioxygenase (DAD) catalyzes the oxidation of 2,4'-dihydroxyacetophenone to 4-hydroxybenzoate and formate as part of the 4-hydroxyacetophenone catabolic pathway. This enzyme is a homo-tetramer containing one iron per molecule of enzyme. This enzyme is an unusual dioxygenase in that it cleaves a C-C bond in a substituent of the aromatic ring rather than within the ring itself. As a bacterial dioxygenase, DAD plays an important environmental role in the aerobic catabolism of aromatic compounds; expression of this enzyme in appropriately engineered microorganisms has the potential to use these aromatic pollutants as a carbon source and thus remove them from the environment. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.
Statistics
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PSSM-Id: 380436
Aligned: 108 rows
Threshold Bit Score: 107.622
Created: 2-Sep-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:H H HClick to see conserved feature residue pattern help
Evidence:
  • Structure:5BPX: Alcaligenes sp. 2,4'-dihydroxyacetophenone dioxygenase binds iron; contacts at 4.0A
  • Structure:3BAL: Acinetobacter johnsonii acetylacetone dioxygenase binds zinc; contacts at 4.0A
  • Comment:The metal binding site is usually a four-coordinate metallocenter that includes three histidines and one glutamate; however, proteins in this subfamily only contain three conserved metal-binding residues

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                 # #                                    
5BPX_A        16 YYVPFte----tVASRPLWISPqqNRWCDILLAReagLVNRHYHpHEVFAYTIsGKWGYLe-hDWTATrGDFVYETPGEG 90  Alcaligenes sp.
BAD56997      31 DDIPWtdwlmpgTRFKLLYANLatGAFTVILRVDpgvTATPHWHlGTAQAFLLeGGFHYDp--EDPGRaGTYTCEVAGAV 108 Nocardia farcin...
WP_049739801  35 DWIPWtnwlmpgTYFKLFFCDLvsGNFTMLLKVDpgiKAAVHWHlHNTEAFIVeGGFYYDe-gDDKGYaGYYTCESAGAI 113 Brevibacillus r...
WP_076592905  24 EWLPWam---pgAHFKLLQADAstGRFTLMIKFEagaAAPIHRHvGAVEGYMLeGGFHYRdepERPFNaGCYLYENDGAV 100 Herminiimonas s...
PCI52599      16 DDLPWipm-vegVDFKLLRACNvtGAWTVYFRAAagaSFPRHQHyGAGEYMVTkGRMVYR---AGEAGaGDYGYEPLGAI 91  Alphaproteobact...
WP_027951208  22 DTLPWtpwgmpgTYFKLLNIDEvsGRFTFLLKVDpgvSAPIHKHvGAAEGFILeGAFHYP---DDAGSaGDYVFECAGAL 98  Haliea salexigens
WP_011763770  28 AEVPWtpwvmegTHFKLLAINElsGGFSMLLKVDpgvQAPVHGHlGSAEAYLVeGGFYYEe--DDPGYaGYYTYERGGSI 105 Azoarcus
KLO98696      20 DDLKWlpl-apkIWIKLIKLTPetGSYTVMIRAEpggVLPRHRHvKSAEIYILkGKGDHPq-aGHFEK-GDYVSEHEGAR 96  Fusarium fujikuroi
OGS51700      11 DELPWtpl-vegISVKLLFSSKesGRWTVLLNCEegsSFAKHKHfGPGEYYVVhGEMDYR---AGVAVtGDYGYEPLGAV 86  Erythrobacter s...
WP_108812144  11 ETQTWtpf-segIDLKLLNASSetGRWTIMLRCQagsSFAKHQHfGAGEYYVIkGHMEYR---TDVAKtGYYGYEPLGAV 86  Sphingorhabdus ...
Feature 1        #                                             
5BPX_A        91 HTLVAfeheePMRVFFIVQgPLIWLDeagnSIGHFDVhDYIAMCRE 136 Alcaligenes sp.
BAD56997     109 HQPVSp---tGTTMLAFVDgPIAGYLpdgtLGVVADArLHYYMARD 151 Nocardia farcinica IFM 10152
WP_049739801 114 HEPFVsp--eGAVMLAISHgPIGGYDddgqLVVMADArLHYLMARD 157 Brevibacillus reuszeri
WP_076592905 101 HQPVSp---nGGVMFAVFHgPVEGLDengnVIGRINWkWHVEKWNA 143 Herminiimonas sp. AS8
PCI52599      92 HELTSfp--eYTELYFTNSgPVVFIEengtVNSILDNfTLVEMAEN 135 Alphaproteobacteria bacterium
WP_027951208  99 HIPETp---dGLTMLAIAHgPIVGYEddgaIAGLIDWqWMMETARA 141 Haliea salexigens
WP_011763770 106 HQPVSp---qGCVMFAVTHgPLAGCNpdgsVSAVVDCrLMLQLAEA 148 Azoarcus
KLO98696      97 HDPLVfe--vETEMLMISEgASVFVDddgnDLYEMDIpMLQNLAAS 140 Fusarium fujikuroi
OGS51700      87 HECTTfp--eETLLHFTNYgPVLFLDeednVISVLDN-AFLEELVS 129 Erythrobacter sp. RIFCSPHIGHO2_12_FULL_63_10
WP_108812144  87 HELTEfi--dYTELLFTNHgPIAFLDdednVIFLLDN-SYLEKLTV 129 Sphingorhabdus sp. Alg231-15

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