Conserved Protein Domain Family
transpos_IS1249

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NF033544: transpos_IS1249 
IS1249 family transposase
Members of this family belong to the IS1249 group branch of the broader IS256 family of transposases. This group differs sharply from the main branch, which includes founding member IS256 itself, by having an N-terminal region with two pairs of closely spaced Cys residues.
Statistics
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PSSM-Id: 468075
Aligned: 30 rows
Threshold Bit Score: 462.908
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012714761   6 RPSCDMCGHGLVKNGKTAAGTQRWLCP--QCNVSSIN-TRAHTSDIRHFKIFIDWILSGESadHLAKRLGVTRRTLTRWF 82  Corynebacterium...
WP_040355768   5 HPLCPVCHELMKRNGFTSKGTQRWRCKstTCGASTTK-QRRDKRLAADFKRFITHVTGQQSmdTIACDMGISRRYLSTRF 83  Corynebacterium...
WP_011273851   5 RPSCPLCSNNTKKNGTTSKGTTRWRCT--KCGHSFTRsTQTHNKNAATMTWFIQWITGTQPltQIAVTQNVSAKTLQRRF 82  Corynebacterium...
WP_011018353   5 RPSCPLCGNNTKKNGTTSKSTTRWRCT--HCGHSFTRnTQTHNKNTATMALFIQWATGTQSltTFAAHHGVTRQTMHHRF 82  high G+C Gram-p...
WP_006895615   7 SPSCGVCGRKLVKNGTTSAGRTRWRCK--DCGASSTQ-KRPDVTRKAELTAFHTWLLHGRQpdHVIAR------TFRRSR 77  Gordonia
WP_013348199  14 SHTCIICHSRLKKNGTTSKGTQRWRCI--TCNASTVF-KREDTTARNQLTGFVSWLMSKHS--QAEFG-GGTGRTFRHQT 87  Glutamicibacter...
WP_076611886   8 AKRCPVCGRAMKKNGRTGKGVQRWKCP--ACRLSSTM-PQRRRRRERTLEEFLSWLPGPSS--QRAADPAGDARALRKRI 82  Bifidobacterium...
WP_003828117   8 AKKCPVCGRPMKKNGRTAKGVQRWKCA--ACSLSSTM-PQENAGRARQLDAFLGWLLGRAS--QSACDANGDSRALRKRT 82  Bifidobacterium...
WP_015449742   8 ARLCPVCGGPMRKNGRTKAGAQRWKCP--GCALSTTA-PRRDGRRRAQLGEFLDWLLSGKR--QWDMDG-ADGRAFRKRV 81  Bifidobacterium
WP_015021726   8 ARHCPICHGRMRRHGRNRSGTQRWMCP--SCSITSTA-RRQDRARAAQLREFLDRLLTGRT--REQMGAMG-ARAWRKRV 81  Bifidobacterium...
WP_012714761  83 KLLWFITVPT-TtDPYRVYDQVFIDGTYFHK-KCLLVACT--ETHVIAWHWCLRESSYEYLKLLDKIAQPLIVTTDGAGG 158 Corynebacterium...
WP_040355768  84 RTFWYIPTPDp-vDPHRIFDQLFIDGTHLSA-GCLLIAST--KNHIVNWVWAKEENTHDYLRLLQPIPAPLMVCLDGGRG 159 Corynebacterium...
WP_011273851  83 HWCWWI-IPTpTiDTFRIYDQIFLDATYLRS-GCLLIAAS--KTHVINWTWARQETTAAYTELLRPIAAPLVAVTDGGQG 158 Corynebacterium...
WP_011018353  83 RWCWWI-IPTpTiDSFRIHDQIFLDATYLKS-GCLLIAAS--KTHVINWTWARHETTAAYTELLRPIAAPLIAVTDGGQG 158 high G+C Gram-p...
WP_006895615  78 SWCWNIEVPPp-pPLTEPAQVLMLDGTYFQS-WCLLIAFD--GTHVVDWQWCDREKKIAWQQILQRQPAPRIAVIDGGRG 153 Gordonia
WP_013348199  88 AWCWNVHPYLh--HTGEVFDEIQVDGIYLRQgWCLLIAIA--HGRVIGWQWCDREKAEAWTVLVQHFPEPKVVVTDGGSG 163 Glutamicibacter...
WP_076611886  83 AWCWRIRPRIa--PPDARRHTVMADGTYMGHgWCLIIAIDgqTGEVLDWQWCAHESKAAYLALFSRLPAPDVLITDGLRG 160 Bifidobacterium...
WP_003828117  83 AWCWNVRPVIp--PPMVKHHTVMADGTYMNHgWCLVIAIDgeSGEVLGFQWCSNGSKAAYMALFSRIPAPDVLITDGLRG 160 Bifidobacterium...
WP_015449742  82 GWCWRLRPAIp--PDGVVRHVIMADGTYMAHgWCLLIAIDglTGEPVAFQWCGHESTAAYAALFSRIPAPDVLVSDGLRG 159 Bifidobacterium
WP_015021726  82 GWCWNIKPAIt--PDGVVHHTLMAAGTHMAHgWCLLIAIDgqTGQVIDRQWCHQENTAACTALFSRIPGPDVLITGGLRG 159 Bifidobacterium...
WP_012714761 159 ALKALRIKWPDVAIQRCLVHVQRNTFADISRNPIHPAHKAIRKLGYMLVQVHNREDAARFTAAVHHTRITFADWLKERTY 238 Corynebacterium...
WP_040355768 160 AYSAIKKDWPSTRIQRCLVHAQRVVRRYVTSQPRTNAGQDIYRLARTLSRITDLDQAAQWSAQLHNFYVTYKDYLNEKTL 239 Corynebacterium...
WP_011273851 159 AQSAIHHCWPTTRIQRCLVHAQRTVRRHTTSNPRTDAGKTIYRLALKLTRITDLDHAAEWVTHLHEFNHTYQVWMNEKTT 238 Corynebacterium...
WP_011018353 159 AQSAIHHCWPTTRIQRCLVHAQRTVRRHTTSNPRTDAGKTLYRLALKLTRITDLDQASTWVAHLHEFDHTYREWMNEKTT 238 high G+C Gram-p...
WP_006895615 154 LLSAISDDWPTTRVQRCYFHIFQTIRRHHTYNPRTDAARQIISLTTALMNIRNADQAVLWLQAYNDWEHEHDRFLRHRTY 233 Gordonia
WP_013348199 164 LMKALKEFWPNVKIQRCLVHIQRNVRTYLTLNPRLPAGKSLRRLSLKLTKIRTQEAAAEWIAAFAAWHAENHELINERTY 243 Glutamicibacter...
WP_076611886 161 AEAACTQAWPGTRIQRCLVHVQRNTRTDLTSRPRLQAGRELKRLSDRLTSVETAGQAVRWGEALNAWHERWKDFIAERTY 240 Bifidobacterium...
WP_003828117 161 AESACNEAWPAARIQRCLVHVQRNTRTDLTSKPRLEAGKELKKLSDGLTKIRDAEAAARWGEALNAWHIRWREFIAERTF 240 Bifidobacterium...
WP_015449742 160 IERACAQAWPRTRIQRCLVHVQRNTRADLTSRPRLQAGRELKELSDALTSVRTAGQAAQWAGALNAWHGRWRDFIAERTW 239 Bifidobacterium
WP_015021726 160 VQKACHACWPGTRIQRCLVHVQRNTKTDPTLKPRLQAGKELKRLSDQLTRVHTIEEAVRWGEALNAWHERWKTPIDERTM 239 Bifidobacterium...
WP_012714761 239 RSAIPAGQVpKWVspnqkwwYTHRNARRALKRLEKLIHAGQLFTFLDPPEG-VTQD--LKATTNLLEGGINKQLKDLAGN 315 Corynebacterium...
WP_040355768 240 S-----IITgKRE-------FTHLRVRKAYYSLENLDRKQWLFTYLNPPQNpADPDikWACTTNSLEGGFNSPLKQHARL 307 Corynebacterium...
WP_011273851 239 I-RDPATGAySRV-------YTHQRVRAAYQSLLSLHRRDLLFTYLQPPPTtINPDg-LAATTNSLEGGINAPIKELARR 309 Corynebacterium...
WP_011018353 239 I-KDPATGAyTKV-------YTHQRVRAAYQSLLSLHRRDLLFTYLQPPPTtIDPDn-LAATTNSLEGGINAPIKELARR 309 high G+C Gram-p...
WP_006895615 234 ARPHTVRPRgVAEast--wwYTHRDLRRTRGLFRKLIAAEHLFTWIDPRLTdEDHP--LPRTTSPLEGGPNKALKDLFRT 309 Gordonia
WP_013348199 244 AADWSG-AWpRGLrrnrkwwYTHDRLRSAYESMNKALRRGHLFTYLD---KdLNGLg-INATTNMIEGAVNSGIRAMIFY 318 Glutamicibacter...
WP_076611886 241 ARDDPS----NPKasrhrwrWTHEELRRCYRRLERLFREGRLFAYLEP--ElLKGGp-VARTTNRLEGGVNSVVKDVLRN 313 Bifidobacterium...
WP_003828117 241 AKDDPA----NPKaskqewwWTHQELRRCYRRLERLFREGKLFAFLEP--KlTAAGp-VARTTNRLEGGVNSPLKHVLLD 313 Bifidobacterium...
WP_015449742 240 AKDDPA----NPKasrqewwWTHGELRRCYRRLERLFREGKLFAFLDP--GlLAGGp-VPRTSNLLEGGINSLVKRTLLE 312 Bifidobacterium
WP_015021726 240 AKDDPA----NPKashqswwWTHQELRRCYRRLEHLFQDRQLFAFLEP--ElTAGGp-VERTTNRLEGGVNPPIKRTLLQ 312 Bifidobacterium...
WP_012714761 316 HRGMFDEHQRITMDWWLYTHTED--PVAPLELTKQQDFGrQGEKAARAAWAKEELTRRGHPDGRPATYDTHIDNEWNPSL 393 Corynebacterium...
WP_040355768 308 HRGRSGERQRKTIDWWLYLRTHR--PKDPQEIAKECNWG-RDALSKVNATTHN-ENQANQETGRPALYDNAISTEYSHNL 383 Corynebacterium...
WP_011273851 310 HRGLSLPHQRTVMDWWLYLHTEV--PDDPVKIARDQRWG-QDALSTATNLITHDTTATTNDIGAPAEYDTAIDTSYQHNL 386 Corynebacterium...
WP_011018353 310 HRGLSLPHQRTVMDWWLYLHTEV--PDDPVKIARDQRWG-QDALSTATDLITHNTTATTNDIGAPAEYDTAIDTSYQHNL 386 high G+C Gram-p...
WP_006895615 310 HRGFLTEHARRAAEWKLNSLTAH--PHDPWSLVRAEHYN--------PPPPRPKETPLEDEQIGPAAYDTGFN--WEDGN 377 Gordonia
WP_013348199 319 HRGMPIEHRRRACEWFCWTHADEgnRPALRTLLRPEHYT--------PETKKKAQHMVDEAPIGPELYGTGPSAEDGQFi 390 Glutamicibacter...
WP_076611886 314 HRGLPEEHMRRACEWVCYMKTA---HPRPESFIPDALRK--------GEKATT-PEPDD---SVAPAYGTGIDWNEFHTT 378 Bifidobacterium...
WP_003828117 314 HHGLPEEHMRRACEWVCYMKSG---NPAPGSLIRAGHWR--------PARPSP-VEEETGAGTGAPRYGTGISWDEFHAH 381 Bifidobacterium...
WP_015449742 313 HHGLPEEHMRRACEWRCYMRSH---APDPYALI-AGLEQ--------AAGTQD-REPTD---GNDDGYGDGIQANNHDDP 376 Bifidobacterium
WP_015021726 313 HHGLPESHMRRACEWHCYMKTD---NPDPASLIRDEHHQ--------PQPAPK-RETRQ-EQDEPEHYGTAINWNEFHTP 379 Bifidobacterium...
WP_012714761 394 GI 395 Corynebacterium aurimucosum
WP_040355768 384 GI 385 Corynebacterium ammoniagenes
WP_011273851 387 GI 388 Corynebacterium jeikeium
WP_011018353 387 GI 388 high G+C Gram-positive bacteria
WP_006895615 378 GI 379 Gordonia
WP_013348199 391 rs 392 Glutamicibacter arilaitensis
WP_076611886 379 TR 380 Bifidobacterium longum
WP_003828117 382 VS 383 Bifidobacterium breve
WP_015449742 377 TN 378 Bifidobacterium
WP_015021726 380 VR 381 Bifidobacterium asteroides
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