5W5F


Conserved Protein Domain Family
Phage_T4_gp19

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pfam06841: Phage_T4_gp19 
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T4-like virus tail tube protein gp19
This family consists of several tail tube protein gp19 sequences from the T4-like viruses. This family also contains bacterial members which suggest lateral transfer of genes.
Statistics
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PSSM-Id: 429149
Aligned: 55 rows
Threshold Bit Score: 66.1195
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5W5F_A         17 RPNLFQVEI--SYLGqnft--fqckATALPAGIVEKIPVGFm----NRKI----NVAGDRTFDDWTVTVMNDeahdARQK 84  Enterobacteria...
jgi:Dshi_2563  17 RTFNFQVLI--DGQT----------VAGLRKFSGLKRTVEAvkwrsAGEPnverVMPGGATYEPITLEQGLT----HDPV 80 
Q39WK7         17 RTFKFQVVI--DGKV----------VAGLKKMGALKKKTTPvkwraSNDPsherVMPGGTSYDPVTLEQGLT----HDPV 80  Geobacter meta...
Q0A7T4         17 RTFKFQILI--DGQP----------VAGLKKMSALKKSTESvawrtAGDPsherQLPGGTSYEAVTLEQGLT----HDPV 80  Alkalilimnicol...
WP_011735715   15 KNMKFRIKW--DGRY----------VAGVSKISALKRSTEVvthreGGDPstsrHSPSLWKFEPITLERGLT----HDPE 78  Pelobacter pro...
Q82QW3         15 KNFKFRVKW--DNRY----------VAGISKVSALKRTTEVvehrdGGDHssarKSPGRTKYEPITLERGVT----HDPE 78  Streptomyces a...
WP_011521669   16 KNFKFRLKW--DGKY----------VYGGSKVSGLKRTTEVvehrsGGDPstshKSPGRTKYEPITLERGLT----QDLN 79  Candidatus Kor...
WP_011927250   15 KNFKFRVKW--DGKY----------VAGVSKVGALKRTTEVvkhreGGDPsssrKSPGRSEYEALTLERGVT----HDKE 78  Bradyrhizobium...
Q1QPZ0         15 KNFKFRIKW--GADY----------VAGVSKISGLKRTTEVvkhreGGDPsssrKSPGRTEYEAITIERGVT----HDVA 78  Nitrobacter ha...
P13331         13 nTTNFVVSIphS--NttsaftlnaqSVPIPGIRIPVTDTVTgpfglGRAQ----RPGVTFEYDPLIVRFIVDeelkSWIG 86  Escherichia vi...
5W5F_A         85 FVDWQSIAAGQGNEITggkp-------aeyKKSAIVRQYARDA-KTvTkEIEIKGLWPTNVGE-LQLDWd-SNNEIQTFE 154 Enterobacteria...
jgi:Dshi_2563  81 FENWANLVNNIQGNAAmsl--------vqyRKDITLNIMNLQG-AV-AlSYRIYRCWVSEAQLvPELDAg-TRNAVGIQM 149
Q39WK7         81 FETWANLVNNIQGDAGmsl--------knyRKDIIINVLNLQG-KV-AiSYKLYRAWVSDYQAlPDLDAg-NMNTIGIQT 149 Geobacter meta...
Q0A7T4         81 FENWANLVNNIEGDGGmsl--------rnfRKDIIINVLNLQG-QV-AiSYKVFRAWVSEFQAlPELDAg-TMNAVGIQT 149 Alkalilimnicol...
WP_011735715   79 FEAWANLVYSTQGDMAisl--------knfRKDLIIELLNEQG-KV-AkAYKVYRCWVSEYQGlPELDA--NGHAIAIEH 146 Pelobacter pro...
Q82QW3         79 FEAWANKVWNYANAQAapdqrdrevslagfRKDLVIEVYNEAG-QK-VlAYQVFRCWVSEYQAlPDLDA--NANAVAIQQ 154 Streptomyces a...
WP_011521669   80 FHDWAGKVWNFGAGLGsevs------ladfRKEIYLEFYNEAG-QV-VmAYKIFRCWVSEYQAlPDLDA--NANAIAIEH 149 Candidatus Kor...
WP_011927250   79 FEQWANKVWNFGAGLGqevs------lkdfRKDIIVEVYNEAG-QL-AiAYKIYRCWVSEFQAeADLDA--NANAVLIQS 148 Bradyrhizobium...
Q1QPZ0         79 FEQWANKVWNYGSGLGkevs------ladfRKDLVIEVYNEAG-QA-AvRYKVFRCWVSEFQSmSDLDA--NGNAVLIQH 148 Nitrobacter ha...
P13331         87 MYEWMLGTSNYLTGENtaq--------ktgPEYITLYILDNSKtEI-VmSINFYKPWVSDLSE-VEFSYteDSDPALVCT 156 Escherichia vi...
5W5F_A        155 VTLALDYWE 163 Enterobacteria phage T4 sensu lato
jgi:Dshi_2563 150 IKLENEGWE 158
Q39WK7        150 ITLQHEGWE 158 Geobacter metallireducens GS-15
Q0A7T4        150 ITLQHEGWQ 158 Alkalilimnicola ehrlichii MLHE-1
WP_011735715  147 MVVQNEGWE 155 Pelobacter propionicus
Q82QW3        155 LKLENEGWL 163 Streptomyces avermitilis
WP_011521669  150 IKLENEGWE 158 Candidatus Koribacter versatilis
WP_011927250  149 IKLENEGWE 157 Bradyrhizobium sp. ORS 278
Q1QPZ0        149 LKLETEGWE 157 Nitrobacter hamburgensis X14
P13331        157 ATIPYTYFQ 165 Escherichia virus T4
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