1YAV,2EMQ,3LQN,3K6E


Conserved Protein Domain Family
CBS_pair_bac

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cd04643: CBS_pair_bac 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341400
Aligned: 46 rows
Threshold Bit Score: 166.907
Created: 4-Dec-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #########   #########     ######   ######  ######                #####     
1YAV_B     18 QFMIEADKVAHVQVgNNLEHALLVLTKTgYTAIPVLDpsyRLHGLIGtNMIMNSIFgleriefEKLDQitVEEVMLTDIP 97  Bacillus subtilis
YP_535359  16 DFLIPADIVANVQEeNHLDHAFMVLTKVrYAKIPVLDhnqKFKGLLSlSMITEEMLglkgidaRCLSKkqVKDVMQTEVE 95  Lactobacillus sali...
ABJ64317   16 SYVIPAEVVANVTAtNTLEHALMVLSKVgYTRIPVLDaddHLQGLLPlAAITDQLLkvpgaavEQLSNytVADAMRPVEH 95  Lactobacillus brev...
EOT44457   16 TFLIPAANVATLLYnHPLEHAMLILTNVgYSKIPVLDsedHLVGLISlADIMQEISgltgfdmQRLEVltVADVMEVKVP 95  Enterococcus colum...
EST90499   16 HFLIPADKVAHVMDqNPLSHALLVLSKVkYSRIPVLDkedRLVGLIGlSDVVDEMLalteistDGLDHkcVRDVMDTDVF 95  Vagococcus lutrae ...
GAF39865   16 HFLIPAAQVASVQGtNTLTHALLVLTKMkYSRIPVLDansKFLGELTmAMVTEQMLgldkidlQPLDKitIAQVMDTNVK 95  Lactobacillus comp...
ACT62785   16 HYLIPADVVANVQTdNNLYHAFLVLTKVkYSKIPVLDhggHFEGLVSlPLITEQMLgfdqlntEILLQkrVCDVMETQVK 95  Lactobacillus plan...
GAF35188   16 DILIPADLVATVNEdNNLQHAFLVLTKVkYAKIPVLDndnHFKGLISlSMITEQMLldtgittRPLDSmkIKEVMQKDVP 95  Lactobacillus farr...
EKU27765   14 ELLIPAENVAHVMPeHSVMHAALVLSSLgYNRIPVIDddgKFAGTIGlSTIMGDLLdwdeisgEKMKTlkVEDVMDRKNN 93  Catellicoccus mari...
EEJ60540   16 SFIIPASRIAFVEDeNPLYHAFLVLTKMkYSKIPVLDkdqKVVGLISlSMITDKMLtsdniviEPLSDlkVKDVMQTDFE 95  Lactobacillus john...
Feature 1                                                        
1YAV_B     98 RLHi-NDPIMKGFGMVINNGFVCVENdEQVFEGIFTRRVVLKELNKHIRSL 147 Bacillus subtilis
YP_535359  96 TIKp-TADCEEILHRLVNQPFLVVVDdDNRFLGIVTRRELLKSMNYLSHEF 145 Lactobacillus salivarius subsp. salivarius UCC118
ABJ64317   96 WVDd-PARLETILSYLVDEPFIPLIDeQQVFQGIITRREILKRVNYLAHNL 145 Lactobacillus brevis ATCC 367
EOT44457   96 KMTe-KDDLETLLRRLVNEPFLPYVDqNNVFLGIFTRKAILKSVNHMVHEI 145 Enterococcus columbae DSM 7374 = ATCC 51263
EST90499   96 SVTn-PEDIEYLLHASVDHSFIPVTDeDEHFLGIVTRRTILKAVNHLLHTC 145 Vagococcus lutrae LBD1
GAF39865   96 TVEn-PYDLEEILHLLVDNAFLPVVSkHQDFVGIITRREMMKSLNYLAHNF 145 Lactobacillus composti DSM 18527 = JCM 14202
ACT62785   96 TVHd-VDDVEETLHLMIDNPFVPVVDeQQIFQGIVTRREFMKSFNFLTHEI 145 Lactobacillus plantarum JDM1
GAF35188   96 TIYe-RDNLEVILRHLVNENFIPYVDhNNKFLGIITRRELFKEINYLAHNF 145 Lactobacillus farraginis DSM 18382 = JCM 14108
EKU27765   94 VLVq-GYDDAQLLREMVHFNFLPVVDeKNVFLGIVTRKEILKRINFLAHEL 143 Catellicoccus marimammalium M35/04/3
EEJ60540   96 TINfaCTNLETQLHLLVDHPFIPVVNdNNVFQGLLTRREWIKAFNYVTHSI 146 Lactobacillus johnsonii ATCC 33200

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