Conserved Protein Domain Family
PspF

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COG1221: PspF 
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]
Statistics
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PSSM-Id: 440834
Aligned: 74 rows
Threshold Bit Score: 568.585
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_007960112  15 HRKEKVYFKLRTLT--QKIDiskykvLEKIGFETTLLSEKLNISRNNVSTELNSLVAEGRVIKILGKPVRYLDRIWLEAN 92  
YP_001089796   1 -MRDEILSFVNECVlfNNFDe----lKKESGIITEDIVKKFNLSRTQSSRLLNDLVKSDNLIKINSRPVIFLPKNKINDV 75  
WP_012994335   2 TNKERVFNLIKDLS--KDINi-----KEKKGLTAQEIAKKLNLRRNVASHLLNELYKEGKIIKINTRPVYFLDKEVYEKK 74  
WP_014125437   1 -MREKIENYLYDLT--KKYSq-----VNKISFSANVISEQVGLKRSTVSSYLNEAFRNQILLKIKTYPVSFLHKKAFTET 72  
WP_015312106   2 KNKEKIFIEVKNLS--NNLDi-----NEKKGLTAEEIAARLNLKRNVVSHLLNELYKEGKVIKINTRPVYFLDKEFYEKQ 74  
WP_039105075   1 MLKQKILSYLANQT--AFFDp----eNISDIFTASHIADKFDIKRNTASLYLNELVTDKKVIKIISRPVYFLHKTVFENQ 74  
WP_072694116   4 KTKEKVLNSLEELIk----------eKNSYTVTTNDLAEKLSLSRQVTSHYLSRLLEEGYVEKQNTRPVYWKLKQKAR-- 71  
WP_009264161   1 MLKDSIIQYVKENT--AKISl----eELDTVLTAEAIAGYFQVKRNTVSYYLNQEIGK-TFFKINTRPVRFLDKKVFEKN 73  
WP_077326239  16 NNKDRILKLLK---------------ECKNHQTAESIAVQLNIQRNTASGILNELVREGIVQKEKTRPVIFSYIQP---- 76  
WP_128753015   3 RNKDKVYNFLKVMS--LDLCn-----NKKRGVTASEISKELNIKRNVASHLLNELYMEGKAIKINTRPVYFIDRDAYENN 75  
WP_007960112  93 AKIMIKDPiikndtdfrkliigtsllcnakeeafscnkneihhliENHVKPKDDIFANIVGSKDDLKNQVKQARAAILYP 172 
YP_001089796  76 VGPTKKSIyenlde----------------------------lknecKLLKQETVFNSIIGYDNSLKEVIEQIKTAVLYP 127 
WP_012994335  75 AKefket---------------------------------aktldSTVKVSNDDPFTKLIGYNGSLKTQVKLCKSAASYP 121 
WP_014125437  73 FFEAQYLEynsfe---------------------------elfaeAPSNYKEKDPLETVIGAFGSLKEKINQIKTAAMYP 125 
WP_015312106  75 SNllskq---------------------------------klnaePIVKVPNEDPFIRLIGYNGSLKTQVKLCKSAASYP 121 
WP_039105075  75 FFNILEYQypsvs---------------------------alfanQPQIESNHDLFSLVIGHNQSLKKPIEQLKMAMLYP 127 
WP_072694116  72 -----------------------------------------------EGRKEADVFNKFIGANGSLKTIINQCKAAISYP 104 
WP_009264161  74 FFTVSKDVyasvndlldenk--------------rkngiqkeekqEINFVEEQDVFQNLIGSNGSLKNPIEQMKTSIFYP 139 
WP_077326239  77 -----------------------------------------------EDQLPEDPFTTFIGADQSLKDAVEKCKLSAGYP 109 
WP_128753015  76 SIlqktig--------------------------------hveigRGTAVEKYDPFDKIIGSHGSLREQVKMCKSAATYP 123 
WP_007960112 173 PKGLHTLLIGPTGIGKTTFAEIMYRYAIEIGRFSFNAPYVIFNCADYAENLQLLVSHLFGNVKGAFTGADIEKKGLVDQA 252 
YP_001089796 128 NGGLTIMLTGESGVGKTFLAKIIYKYSVSSNVLEKNSPYNVLNCAQYYNNLELLSSLLFGHVKGAYTGANESRAGLIEQS 207 
WP_012994335 122 PNGLPILLIGNTGVGKSFIAQLIYEYAKSINAIDENAPYVIFNCAEYANNPELLSANLFGYVKGAFTGADKDKPGLLEEA 201 
WP_014125437 126 NGGLPIMLMGASGSGKTFLAEKIYEYMTEKQIIDFSAPFVSHNCAQYYNNPELLSSVLFGYTKGAFTGADSNKEGLLDAA 205 
WP_015312106 122 PNGLPILLIGNTGVGKSFIAQLIYEYAKSINVIGQNAPYVIFNCAEYANNPELLSANLFGYIKGAFTGADKDKSGLLEEA 201 
WP_039105075 128 NGGLPLLIGGSSGTGKSYLANLLYQYCKTNQLIDENAPFVTFNCAQYANNPELLTSNLFGYVKGAFTGADHARQGAFEHA 207 
WP_072694116 105 PNGMPIILNGESGVGKSFLANLIYEYATKTEVINKKAPFKVLNCADYANNPELLSASLFGYKRGAFTGADKDKEGLLSQA 184 
WP_009264161 140 NTSLPVFLHGPTGSGKSFMARKIYEFAVQEGILKPDAPFIIMNCAQYVNNIELLSSNLFGYVKGAFTGAYATTKGLLEAA 219 
WP_077326239 110 NKGMPILLFGSSGVGKSLLAEYIYQYAKFIGTIPEDAPFVVLNCADYANNKELLSSVLFGYKKGAFTGANKDTKGLIEEA 189 
WP_128753015 124 PDGLPLLLIGNSGTGKSFMAQVIYEYAKNNKIIAEDAPYVIFNCAEYADNPELLSANLFGFVKGAFTGADKDKIGLLEEA 203 
WP_007960112 253 NGGILFLDEVHRLPPEGQEMLFSLMDRGSYRRLGESENTRKADILIIAATTEDPKKVILGTLLRRIPVIIMLPSLAERSL 332 
YP_001089796 208 DGGVLFLDEVHRLNSEGQEKLFTFMDTSTFSRIGENGVIRKARVRLIFATTESLSE-FLQTFLRRIPINIYVPNIEERGT 286 
WP_012994335 202 DGGYLFLDEVHRLPPEGQEKLFLFLDKGIFRRLGETGNWRTAKVRFIFATTEDPEQTLTKTFLRRIPLVVNIPSLYDRPL 281 
WP_014125437 206 DGGVLFLDEVHRLSEEGQEKLFTFMDTGEYSPIGNDSLKKKANIRLVFATTENIESTFLPTFLRRVPVVVSLPRFYERPQ 285 
WP_015312106 202 DGGYLFLDEVHRLPPEGQEKLFLFLDKGLFRRLGETGNWRTSKVRFIFATTEDPEQSLTKTFLRRIPLVVNIPSLYDRPL 281 
WP_039105075 208 NGGILFLDEVHRLNGEGQEKLFTYLDNGIIYRMGDTKNSIPLHVRLIFATTENLNDNFMRTFLRRIPVQVTLPDLEDRTK 287 
WP_072694116 185 DGGFLFLDEVHRLSLENQEKIFVFMDTGEYYPLGETSVSKKANVRFIFATTEKNEEVLLDTFSRRISLKVQMPNLQSYPL 264 
WP_009264161 220 DGGMLFLDEVHRLNSESQEKLFVFLDQGIFRRMGESEGWHKAKVRMVMATTENLESNFLDTFLRRIPIVVQIPSLRERGE 299 
WP_077326239 190 DKGYLFLDEVHRLSPEGQEKLFRYMDKGIISRMGDSGQNCELNVRLIFATTEGRET-MLDTFLRRIPVDVVLPDFQERTL 268 
WP_128753015 204 NGGYLFLDEVHRLTPEGQEKLFLFLDKGIFRRLGESNNWRSSKVRFIFATTEEPSLSLINTFLRRIPLVVSIPDLFRRPV 283 
WP_007960112 333 KGRMTLICQFFREESVKIKIPVTVSKEVLKVLLIYKCPGNIGQLKNDIQLMCANAFVEYvTEQQSDVHIKLSQLS-QRLK 411 
YP_001089796 287 IEKRKIVEHFIYEESKVLGLPIEITQITLNAILKIKFKGNIGECKNVIKYACGRAYAKNqRRNG-NIFVTLQDLP-RNLY 364 
WP_012994335 282 HERLQLIYNFYKNEAKNLGMDILISKQVLNVLLKTKISGNIGQLMNVIKYSCAQAYNHViREKTNILRIHLYDLP-KEMQ 360 
WP_014125437 286 PERLQLIDQFFIQESNILQKELSVSSKVIHFLIDTDLEGNVGKIKNLIKFACGNAYTKQyNNQR--INVKLLDIPvENLL 363 
WP_015312106 282 HERLQMIYNFYKMESKNLGMDILISKQVLNVLLRTRISGNIGKMINVIKYSCAQAYSQTlKDKMKILRIHLYDLP-REIQ 360 
WP_039105075 288 QEKEQLIYLLFRNEAKIIDRKLSISPQTLINFKNQHFIGNIGSLENAIKNTIAYAFAKQv--NQDLIKITIYDIP-QEFI 364 
WP_072694116 265 SERLQLVQKLYLGEANKLGISFTLTKEVLQRLCFDRVKGNIGTLKSTIQLSCANAYQENq--NSERLVIELSHLS-LEAF 341 
WP_009264161 300 QERLQFIYHFFIEESKVLDKKMKVSGNVIEALLNHLYQGNIGDLENKIKFICATAYAKKk--RKNEIDIHLEHLP-EDVL 376 
WP_077326239 269 EEKYELILFLIHQESKTMNTAFQVSSNVINRLLTFQGKGNIGTLKNIIRLSCAKAYNERs-KGQEVIPLNLSHLSsDTLL 347 
WP_128753015 284 QEKLQMIYNFYQEESKNIGIDIVVSKQVMDVLLKINISGNIGKLKNAIKYSCASAYGAYvMDSVKILKIHLYDLP-AEIK 362 
WP_007960112 412 EGVFTIDn-KRQEiakvfnlndfESITFNGAKEDLHASlknvllyDDYKTEEDF-YDVILRSAQKFLEKGLSVNEIRE-R 488 
YP_001089796 365 IENVDIFqfQSGKs---------KSIIFSPKQFSIEMSng----rNKRNIIYQS-FIKCLDYFDRLEKNEITKEKFSK-K 429 
WP_012994335 361 ADLDIIKs-NFHF----------NGMLISHSRKDEDLTwd----kEDDKEVYDV-VNKLFELFERYSSKEISEDTFKK-D 423 
WP_014125437 364 QPYPSAKisNQHNidkr---vylPNTEIQPNle-----------tSERKKLKNF-FTRLLDDYKKIEDNTLTSTQFIS-F 427 
WP_015312106 361 SDTDDMLkgNFHF----------NGMFISQNKIDEYFKdd----lENDKLIGGI-TEKILDLFGRYKDGALNIDKLKN-E 424 
WP_039105075 365 NQQFNPN--PQLNe---------SNIEIDKTtdlgyl---ihqsnPINEMIYDA-YIKLSYLFKKNPQQIDITPDIEN-E 428 
WP_072694116 342 SPSAd----SYYPlkeft-iskeESLDLSNDle-----------tLDNKVFENF-YTQIEKFLYKe--------NINEvE 396 
WP_009264161 377 KGIAEKAe-NKIGn--------yDTVEIYPNAPIQEILsg---dkNGKDYHQEL-FEKLIAIFGEFRSQNYAKEQFEK-R 442 
WP_077326239 348 LGNGESIpy------------vnEMIEVSPDQDAVWKIs------MTEQVDVDFsEKVINDLIREYLEKDISTIKFRK-I 408 
WP_128753015 363 TKVDFILt-GSIF----------SSMFVSKDIPKDYAPnd----iFEDSTINKE-TEVLLDSIRDYKNNKTDIRNFKK-K 425 
WP_007960112 489 MNQQIQNRFHDSFS-ASQDHnLLLEKEVLAKIVTPEIVNIIEESLAESKEAMGLSFDSKVIYSLALHMETLVERLRLGQI 567 
YP_001089796 430 SSNLMIRLMDNLVFs-----nNDENNNVLMELIISIMQDIFRNLEVNNNIKYDGNNVLAFSSYLYLKDESYQLSDEYKAL 504 
WP_012994335 424 ALIYLNEFTDKIIF-------KNDNTYIDSIVFNAIKSVVENVLNIIQNMYGIKYYGNSVLVLTHFINYLLSDVTYEKYS 496 
WP_014125437 428 ATENVTLLMDEFIF-------FTPEDKETSFFSFITYNIRSAFQFMNENYGFVQDGNKILSIANYLYVKESQDFLFDSTD 500 
WP_015312106 425 SLLYLNQLSDMVV--------FSNNENRIDSVVFNAIKNVIDNVLNIIENNYGIKYYGNTTIVLTHFTSRLLESMSQIYK 496 
WP_039105075 429 LLNEIDRLFDKLIY-ENKQQ-NQNIIKHVINTVTYELQNLEQMFNVQFNGNYIYAISYYLYYRANVEYQFNQINFAMMKS 506 
WP_072694116 397 LLLYFKKFTREFLI-SYDTYnKEASLIDKNIKYLFLENIENLMQSYGLNISDETRRQIYNYWYYFNGNPRNQNKPNSKIM 475 
WP_009264161 443 CMHTVNDVLDCLIY-------NQNSENENTMRKYIVNSVQEAFRYVEYSCNVQFGGNSLHAITAYFFCMNQHFRKQNIFI 515 
WP_077326239 409 IYDEVNRIEDIVIN-------QEIHPYVQNLYTQAVRNILIYLQDNYGLKYSGVMEMVFVKMLYVLNNQNKHTDDRKYEH 481 
WP_128753015 426 MTTTIDKVLDKIIFeDIENYnDTVFYNETKKVIQNILKIMENLYGIRYYGNASIVFTYLINIMYDGITKKLEGNYDFEAA 505 
WP_007960112 568 SIHPNIKKIYEEHQQEFAIAERIKNKLEEKLPIHIPDDEVAFTAMLLYSLHIKKSEENIEVLVITHGYATATNMVQVAQT 647 
YP_001089796 505 ENKLLIYLKKESYKEYSIISKISTLITNRLDMYLNNVDTIIMIIFIKSTIIRMKFNQVNATIIAHGYATASSMANVCNRM 584 
WP_012994335 497 ENIKVVLGVLKNVFPKEFIIANKMVELIEVNLDVKLNQIAVIYFTLYIKSLTKNDNTNLINSIIIAHGYSTASSIASVAN 576 
WP_014125437 501 WVDLKKPLLHFLEEQMKDEVWLAKRFLNSLSLHMDSEVLDEDVVFIALYLHSMNLTLTDNSIKAIVLAHGYSTASSMANV 580 
WP_015312106 497 YDSISVESAIDVLKNIFPKEFIIANKMVELIEVNLDAKLDRIAVIYFTLYIKSMNKNDNTNIINSIIIAHGYSTASSIAS 576 
WP_039105075 507 IQQAVKKLNPHMYRLVKQLFRSIENKIDLQTQAVDIIILTLYLNKMGGTENSGLTKAIILAHGYATASSIANVTNRLLGK 586 
WP_072694116 476 DFMQELFPRSYYIAKILLEKEPFIKNISNKEGLLFFIVFIIQKHVDENVELQGLIVAHGSSTATSIKEVVNNLCSSFIFE 555 
WP_009264161 516 PNELMQYILEEYPKEIHIAKRILNMLSSKMDIVSTQEDLIPLTIYIRSLLNVSLSRKRPRAVILAHGYATASSVADVANR 595 
WP_077326239 482 LAKQLQRVMYRYYKMGLIFYEMLHQAVDYETNPWFVRMFAMLYFYSIARDEMDYTNAIIVSHGPATASSITSTVNKVFET 561 
WP_128753015 506 LNIIEDVFPKEFLIAKKMTGLIEVNLDMKTDRLILIYFTLYINTFNQENNGENITAVIISHGYSTASSIASVANRLLRQF 585 
WP_007960112 648 LLGYECIHAIDMPLEEKVEVILNKATERVKKINKGRGVLLLVDMGSLTTFSEIISERTGIPTRVVKMVSTPMVIEAARKA 727 
YP_001089796 585 LGKNIFTAIDMPIDATIADVSKQMSRYLEGDRIKNGLIVLFDMGSLNLIYEDLKNKINSPMLFIDQISTISALEVGNLLM 664 
WP_012994335 577 RLLGQFVFEAFDMPIEMSTQEIMLKVQDYLKNIDTSKGIIILVDMGSLEEIYKSLTDIVEGDIAIINNITTQLALDVGNK 656 
WP_014125437 581 ANRMLQKNIFQAYDMPLGITASEVESKIFQYIENYQVEKGLVVLIDMGSLNIITEKLATKIQSPLLVINSFNTPLLLEVG 660 
WP_015312106 577 VANRLLGHFIFEAFDMPIDMSTQDIMLKVESYLKNIDTSKGIIILVDMGSLEDIYKSLINVVDGDIGIINNITTQLAMDV 656 
WP_039105075 587 NVFEAFDMPIDIAPQDIANKVINYIERNDISRGLLILVDMGSLKDIYKFLPHTINSPIAIINNVSTQIAMNIGSLILDHI 666 
WP_072694116 556 AMDMPIDTSVEQIVIKVNDYLKKLDTSNGLILLVDMGTLRELYTEIKSNLKGNLLIINNVTTAVALDIGLKIQHNQNFDL 635 
WP_009264161 596 ILDENIFESVDMPIEKNVSDVVQWMKEYVEKNDVSHGIILMVDMGSLREIYRSFEENLKSPLVVMNNISTQMAIMAGELI 675 
WP_077326239 562 YIFEAFDMEYDTPKKDVVKRIKRYLKNTNTSKGLLIFVDMGSLLDISEDIKDDVEGDLGIVNNITTEMALEAGELILKHE 641 
WP_128753015 586 IFEAFDMPIEMSIQEIMHKICSYLKGINTSSGVIILVDMGSLEEIYRSIGDIVNGDIGIVNNITTQLAIGVGNKIIRGEE 665 
WP_007960112 728 MLPNISLDMLVESVKAMSPLIGGRIKVDNSPVEFGYSPIIYQERAIAMLEEILTFLNVGKASRLLNEVLEKVADTCNGVI 807 
YP_001089796 665 QGKNIEEIAEIMDEETKPNIQLYYPQKNKEYAIISSCFTGIGTAIKIQHLLSESLIGIVDVKIIPYDYDSLVSMGDKEPV 744 
WP_012994335 657 IIQNQPIEQIVTESIQRNSSSYKLIKSQKNKRNAIIATCITGIGTAVKIKELLKECFVNEDIEIIAYDYNRLKGNGVKDE 736 
WP_014125437 661 NLIINSQTIFEISEQIADWLPIKRQLTTPKTNKKKAIITCCYTGMGSAVQIKEILQKSLGETGETLTVLPYDYLKLKENK 740 
WP_015312106 657 GNRIIQGQSLEQIVVESVKKNNSSYKYIKSNKNRKIGIITTCITGIGTAVKIKDLLHECLANDDIEIIAYDYYRLKGNGI 736 
WP_039105075 667 YLEKIIEEVIPKNIPEHNIIYPNHNKPKAIITTCVTGIGTANKIKTLLKDSITNVLNIEIIAYDFQALERDKGTDSVFLL 746 
WP_072694116 636 IAESSKNNYKFETQFFEGFSNKNNIVISCMSGLGLSEKLKEIISTVISHHQIEILTMEYNKLVGILENNEESHFKETKLI 715 
WP_009264161 676 QKEEKLEDIVRILEEENETEYKIIYPQIQKQKTILTCCITGTGTAEQIRLLIENSIPKEMDIQVISYDYDQLQNVEIVKG 755 
WP_077326239 642 DLQNIMDTIIEHHVTKKSFVPSKQKPKAILLCCTTGLGTTDKMKMLLQGCLEGIDIDVVEMTYAELSTEGNRCDVFRKYD 721 
WP_128753015 666 LEKVVSESVAENNNRYKFIKYNRNKKDAIIVTCMTGIGVAVKIRDLFAKCLMDNNIEIIAYDYNKLKGNGTEDKIFKEYE 745 
WP_007960112 808 DESIRIKFLFHCSCMIERIIRNEPLPYTNFLHIKESKESLFKTIKDTFIIVEEAFGIEIPNTELAYVVEMMDGHFNILSN 887 
YP_001089796 745 FEMYDVMAIVGTANPNVNGVDFILLEDIISGKGEDDVFRIFSRVVENEKIKNINDSIVKNFSLIRVIDSLTILDSKKIIE 824 
WP_012994335 737 IFKDFNVKLIIGTADPGIKEIPYLSLEDLIAGKGDVLLSKVLRGVADAEKIQQINQTIVRLFSLQNVLHHLTILNPDKII 816 
WP_014125437 741 RQELPFQMYNVLAIVGTENPEIESVPYFGLDRLVNGEQIDDFVQIIAQKFAVDGENLKQELIFNFSLKKMVESLTILDAD 820 
WP_015312106 737 KDEIFKNYDIRLIIGTADPGIKEIPYLSLEDLIAGRGDIILNKVLKDLTDAKTIEQVNQVVVKLFSLQNVLNYLTILNPD 816 
WP_039105075 747 YNVIAIIGTLNPNIADVPFISLEELISGNTNSILLSLLHEANQQTIQEINNSIIKNFSLERVIESVTILDTNKVINYIEQ 826 
WP_072694116 716 ITTTDLDHKLNIPSMNIYDIFKEEGKNSFWLALKESIDYHTFEALKNEILKFLSIEGISDRLTLLNPKVVINEIEKVINR 795 
WP_009264161 756 IYQKCEVLGIVGTKNPQIGQEKFIPLEQLVSGAATEQMINMLKNVADAVSMEKLNDNLIRNFSMNRLLGFLTILDTEKIL 835 
WP_077326239 722 IQFIITTSKLMIQGVTTLMLNELIDERGEKVIYSTVGRYCDKDKTQRFIENIVRSFTIKNLIGQLTILNPDKIMGDVEET 801 
WP_128753015 746 VKLIIGTINPGIQEIQYLSLEDLILSKGYSALKKALKNIAGKEDVEKINQAIVKLFSLQNVIENITILNSNKIIDQVEII 825 
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