Conserved Protein Domain Family
SmrA

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COG2840: SmrA 
DNA-nicking endonuclease, Smr domain [Replication, recombination and repair]
Statistics
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PSSM-Id: 442088
Aligned: 443 rows
Threshold Bit Score: 71.4817
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_007088509   8 KRR-RSV--S--D----EEKALWEIFTRDVKPLRSKq-R-KgSdavfEl-----dDdhP-KsdtampLPddlqgeinKaE 70 
WP_004513482  49 RA----A--E--P----DDLSLFLREMADVRRIRPAa-E---P----Spkk-ggeKa-P--------EPre----laEaA 94 
WP_011452817   1 -mfkK-LdkStsDcslhDDTSLWASITLTATPIYTNk--------------------vPyT------------------- 39 
WP_011737164  43 TRP-EPV-----E----DDSELFLRAMDDVKRLGRRd-A---Pa--rAatqtqqvK--P--------APg-------RaA 89 
WP_012030894   1 ------M--T--D----KKTPSFAELIGAVQKIHK-------P---------------P-Q------SPdf-----gRvA 32 
WP_012040392   3 RRA-KPL--P--A----ADLEVWTRYLRHVRPLRGVr--------------------vP-Eppp-pdKPgs------vrP 45 
WP_051908813   1 ------mknP--P----KDSHLWQELIKGIKPLKH---R---P---------------P-Hl----eRP--------SqP 34 
WP_046312284 131 itHyH-L----------KEfEKWPNLL--IQFIQHRngS-------------------P-Ti----fEPv---------- 163
WP_100276644   1 ------M--A--D----ED-ELFAEAMGRVRPLAASn-KiD-S------------E--SlKk----------------rK 33 
WP_126316029   1 ------M--T--E----KE--RFADLVGIVTPLKT-------P---------------P-Q------AEdf-----gKqA 30 
WP_007088509  71 Ev---rA-A-RnlP-----SARN--------AD-RGPqikNRA--LA-ELE-Pgv------tdNIDK-STAKKFQKG--- 117
WP_004513482  95 EirrqqE-A-E--E-----HRVFanaisnlrLDvTFS---DHL--PE-EKG-Ea---------PRPT-SRLKQLKSG--- 145
WP_011452817  40 --------KiR--KinnnlNTSLnnky---tnhyTPPi----------YTK-PnsthdissgsNLNN-NTKKKIDQG--- 91 
WP_011737164  90 AekrqpElD-Rg-E-----REAFskaigqlkLDvTFS---DQT--PE-DEElK----------PLGA-NRLRQLKRG--- 142
WP_012030894  33 Ktl---qpL-Rl-Q-----AQHKreip----------qyfEQE--ID-ENY-D----------ITAR-A-YQKMLRP--- 73 
WP_012040392  46 E------------Pegvrvvaap---apppalpqRRP---GVA--IG-VAP-P----------GLDR-ATWAKFRAG--- 89 
WP_051908813  35 VdavkiN-KiRl----------------------------REY--FDrHSH-Pisa-----eaHWHN-ETKKLHKVG--- 73 
WP_046312284 164 -------vK-Rv-Qf---kASSFyks------krTAPvlnKEAylFQlDQK-Pa---------SVNPdRIKEQLTEAvek 215
WP_100276644  34 Keq--lS-R-Rv-R-----VGTIepp-----qraFSPevtDGP--WQ-LIA-D----------GVSR-ERVRRLGAG--- 80 
WP_126316029  31 Kil---qrR-Ri-E-----AQRIrha------------taPQE--AR-HNL-A----------AIPE-ARFHALCAG--- 70 
WP_007088509 118 -----QMSIDGRIDLH---------GMTQDV----AHHALNAFIEDSWRAGKRCVLVITGKGSRADeyGRTGLLRQRTPQ 179
WP_004513482 146 -----QIRVGLELDLH---------GLTKEE----ALESLESFIAAAHRRDQKAVLVITGKGNNSP---GEPVLQGAVLS 204
WP_011452817  92 -----KYHIDSILDLH---------GYTLDA----AYNTLMNFIIKNYNSANKLLLIITGWGSTDK--YNSNSIKSNFSK 151
WP_011737164 143 -----VVSVERQLDLH---------GLTREE----ALEALPRFLASAAAHGEKAVLVITGKGNNSP---VEPVLQQAVLG 201
WP_012030894  74 -----DLYFAREIDCH---------GKYVDD----ALRYIQDALNFRKNKCLCYWLIIHGKGRNSLi-GDRAPVKFAVIG 134
WP_012040392  90 -----RIAPERTLDLH---------GMTAAA----AHVAVNALIAGAVSRGMRCVEIVTGHGRRT---GGEGVLRREVPI 148
WP_051908813  74 -----KVILEARLDLH---------GMTREE----AHQRLQKFIALAHHDQLTWVLVITGKGH--P--DNPHTLKKLLPQ 131
WP_046312284 216 senfkLTAPEHEVDLHieklvddhtGMSNSAiikiQLERFQDALDRAMATNMHEIVFIHGAGN--------GVLRKELQK 287
WP_100276644  81 -----RPPVGPTFDLH---------GMRRDE----ALELLVEGFNAALLDGQRALRIIHGRGLHS---QGKAILKEAVYH 139
WP_126316029  71 -----RLPVAREIDLH---------GFFVDE----ALRYLGDMLDERKNRRAECWVIVHGKGRNSPh-YDRAPLKQAVLD 131
WP_007088509 180 WLSAprlRTRILAISEARIQHG-GSGAFYVLLKR 212
WP_004513482 205 WLREr-gKGKVAEFAPAPRELG-GSGAIVVFLRT 236
WP_011452817 152 WLQSvqiANLILYYREANRIHG-GKGAFYVLLKS 184
WP_011737164 202 WLRDa-gRKLVVEFAPAPREMG-GSGAFVVFLRR 233
WP_012030894 135 HLRC---HPAISAIRALRDGRG-ESGAVVVAVKA 164
WP_012040392 149 WLNDqplRPMILAV--CHPHAA-NQGALRVLLRR 179
WP_051908813 132 WLEE---MSLATGYSNAKDQHG-GQGAYYVRVKS 161
WP_046312284 288 ILSR---TPGIKYFEDARKEKF-GYGATLVRLK- 316
WP_100276644 140 WLRE---GAFAHAVLAAIPEPGsGGGACLVLLRR 170
WP_126316029 132 LLLR---HPAVNALATIIDSDG-YSGAVSVEIKE 161
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