Conserved Protein Domain Family
T4SS_VirB10

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NF038091: T4SS_VirB10 
type IV secretion system protein VirB10
Members of this family are VirB10, an outer membrane-associated protein from the apparatus of protein type IV secretion systems (T4SS). The model attempts to exclude related TraI proteins of conjugal transfer systems as well as the ComB10 protein of a DNA-translocating competence protein of Helicobacter pylori. Because the N-terminal regions of VirB10 proteins are highly variable, the model
Statistics
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PSSM-Id: 468345
Aligned: 62 rows
Threshold Bit Score: 215.12
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_006023724    201 ASKNDRIDALVAQGTLIRGVLETAVESDLPGMVRAVVTENVWSFDGRRVLIPSGSRLIGEYRSGIAQGQTRVFIVWTRML 280 Afipia broomeae
1_ncbifamImport   1 ATRLTDPSLVAPQGTVIPAILETAINSDLPGFVRAVVSRDVRGFDGSTVLIPRGSKLIGQYKSGVAAGQTRAFIVWSRVL 80 
WP_006273043    176 AWRIGDPSKVVPQGAVIPAVLETAINSDLPGYTRAVVSRDIRSFDGTTILIPKGSRLVGQYKSGLTSGETRAFIIWNRLI 255 Asticcacauli...
WP_007874273    168 ATRLADPGHTVIQGTLIAAVLETAIDSDLPGFARAVVSQDIRSFDGSRVLIPRASRLVGQYKSGVANGQKRAYVLWSRLI 247 Polaromonas ...
WP_004129402    191 ATRNDRIDALIPQGTLIRGVLETAIQSDLPGMVRAVISTDVYSFDGRRILLPKGTMLTGEYKSGIARGQTRVLIVWTRAL 270 Rhizobium fr...
WP_016555393    179 ARQISRIDALIPEGTLIPGILETAVNSDLPGQIRAITSEDVYSFDGRRVLIPTGTRLIGEYQSDITRGQKRIFVIWTRLL 258 Rhizobium gr...
WP_011982856    192 ATKIKRIDAVVPEGTMIPGILETSIVSDLPGQVRAITSEDVYSFDGRRILIPTGTRLIGEYQSDVMTGQTRVFVVWTRLL 271 Brucella ant...
WP_012559856    210 ASQNRRTDAWIPQGTMIRGTLETAINSDLAGMVKGIVREDVYSFDGRRILIPAGSSLIGDYKSGVERGQERILIVWTRMI 289 Rhizobium le...
WP_011452123    232 AGYVGDLDYVLTEGKMLDAVLETAVNTDLKAKVRAVVSRDVFSESGNQILIPKGSRLIGSYSTDISFTQSRVDITWSRII 311 Neorickettsi...
WP_011154711    218 ATKINNLELTILQGKIIDVVLETAINSDLQGTLRGIVARDVYSEAGNVVMIPKGSRLIGNYSFNASPGKTRVQISWNRVI 297 heartwater r...
WP_006023724    281 RSDGVSVQLG-SNGADELGRAGNAGFVDNHYLERFGSAIVLSLVGGGAQFLSAYGQNTDgygngtvitttdpvtGVVTQT 359 Afipia broomeae
1_ncbifamImport  81 TPQGVSIDIA-SPGADRLGRGGLDGETNTHFFRRFGASILLSVLNAGLNAASNNGNGGD---------------NTAIII 144
WP_006273043    256 RPDGLSIQLA-SPATDDLGQAGMSGKVDSHFAKRFGSAMLLSVVNGLSTALSGKSG-------------------STIVI 315 Asticcacauli...
WP_007874273    248 RPDGASIALA-SPATDFAGNTGLAGEVDTHFFARFGSAILLSVVD----VLAAVGS-------------------ASVVI 303 Polaromonas ...
WP_004129402    271 RSDGTSVALG-SYGADDLGRSGLPGVVDKHYLERFGAASVLSLVGGVSSFIAGLNTDGss------------stTSSSST 337 Rhizobium fr...
WP_016555393    259 RDDGVSVRLN-SIGADGLGRSGLTGRVENKWRERFGSAILLSIVGAGSSYLTGYGSNQFst-----------gsDGYSRS 326 Rhizobium gr...
WP_011982856    272 RDDGVSVRLN-SVGTDSLGRSGLTGIVDKKWRERFGASIMLSVVGAGASYLTGFGSGea-------------fgRNNDDA 337 Brucella ant...
WP_012559856    290 RGDGVSVQLG-SYGTDRLGRSGMTGVVDRKYWERFGPPALMTLIGGATQYIAQLGQKPDrniti------indsGSVTSI 362 Rhizobium le...
WP_011452123    312 LPNGIDINLGgFDGVDSLGRAGVRGAVNNKVSNVMSTSILLATARVASGMIVDKIMGTNksqmnvp--knrpslKDENAD 389 Neorickettsi...
WP_011154711    298 LPHGVDIALD-STGTDELGRQGASGVVDTKVGSILTSTILLAGVSIATSYVTSKIPEINdhpiie----sksddKDKDKD 372 heartwater r...
WP_006023724    360 QTgvnqnqlslq---arqiaaqnisQTLTNIAQEALRNSINIPPTIYLDQGTRIIVFVRRDLDFSALYPD 426 Afipia broomeae
1_ncbifamImport 145 GSp----------------------QQASNIASIALQREIDIPTTITVAQGAPIRVFVARDLDFSGVVQK 192
WP_006273043    316 GSs----------------------SGATGLISDALSNDMKIPPTIKVPQGAKIQVFAARDLDFNLGQ-- 361 Asticcacaulis biprosth...
WP_007874273    304 SGs----------------------QSAA---AVAVQRDAQIPPTIKVPQGSPIRVFTARDLDFAAVTRE 348 Polaromonas sp. CF318
WP_004129402    338 ASnaqsqa------------qqtvsQTMAEMANIALKDSINIPPTIYVDQGTQIVVFVRRDLDFSALYPD 395 Rhizobium freirei
WP_016555393    327 GEaadla-------------rqtiaQTFSDMANQALSENLKIPPTISVHQGERIFVYVRQDLDFSAMYPD 383 Rhizobium grahamii
WP_011982856    338 KRgeela-------------retiaETFSQMANTALSENLRIKPTISVHQGERIFIFVRQDLDFSAMYDD 394 Brucella anthropi
WP_012559856    363 PQgngdtsqdra----rqiaaetiaSGIQQLGTEAFQDSRNIRPTIHIPQGSDINVFVTRDLDFADLYPD 428 Rhizobium leguminosarum
WP_011452123    390 ESkvkgspga--------iiamqaiQDASKQVTDYVKRTADVNPTLTVNQGTRLKVFVNQDVVFPRAAFQ 451 Neorickettsia sennetsu
WP_011154711    373 KDkdkdkdkdktkttlpvkilskavDDFSQSIKDIIQKYTNNNPTVYVDQGTLLKVFVNKDIVFPKEAVR 442 heartwater rickettsia
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