Conserved Protein Domain Family
Csm2

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COG1421: Csm2 
CRISPR-Cas system type III CSM-effector complex small subunit Csm2 [Defense mechanisms]
CRISPR-Cas system type III CSM-effector complex small subunit Csm2 is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 441031
Aligned: 40 rows
Threshold Bit Score: 67.3148
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014373205   1 MIKFN------------------------EDWIKGKLTSLGIK-YAeqLGAAL------VEHEMTTSQIRNVYSEVKRIQ 49 
NP_229607      1 MAVS-------------------------QGVSLKEDLKDLVR-KAeeIGREL-------SGKLKTNQLRKFHGHLTKIW 47 
YP_002248477   1 MSNGGlpki----------------vfwaDEKAEMINPDLFST-VAeaWAKKIkevgkiAKDKNKISQIRKFYDEVLLFS 63 
WP_013033751   1 MSyrplphrssreqg-ppripkpetqcyfEADGKTPRAALVDE-EAeqLAQEM--------SKVSHTQLRRFYGDVLSLR 70 
WP_010871194   1 MSKIGkcilnpne-------------inlilninSQNANEIID-IAenLAKEF--------EQIPATKMRDFYDYVLRID 58 
WP_013505650   1 MTiat----------------------irEYDDPEKRVKLFSD-RAeeTFKAM------SGRNLTFTQLRRFYNQILSYR 51 
WP_013747052   1 MIkei----------------------ekITFGAGKPATIFSD-IAdeCAKLIk----kNKDVNTTTQTRKFYDELAIWN 53 
WP_013799384   1 MGYSKyqnpnpknenkagknsdklklldeilnvNDKNIKKFLN-YAeeFANk-------NLKYISFTKIRKFYDYLNEIS 72 
WP_013886476   1 MARQEnss------------------dvvKTSFKKYEFSDLIKtKAkeVAELMkke-hdDRKINKNSQIRKFFDDLYSVK 61 
WP_014162400   1 MERGKndnrnnqlngk---ierlkkeiieLMSSEKTDYSRLVS-IGkeVAQEI--------KKLSSNQLRKFHAYIVRFA 68 
WP_014373205  50 ATIKgvslresiakekkgkvEQEKIDKAYRSFLLLRPKVAYAAHREIgkw--kgLrlfrEAFEEMHKAVVehgehNGVLD 127
NP_229607     48 SNYIykkkd-------yrdnPEKFNEEILNELHFMKIFLAYQVGRDIe-----gI----SELKEILEPLI-----DEIKT 106
YP_002248477  64 DRVK----------------NEDQFKKMLPYLKMLNAKAAYADGRNH-------It---KEFKDFIQDCV-----SLVNT 112
WP_013033751  71 RRLEakas---------kieKESLFRELLPEFKMLKAKAVYADGRLGh-----------RDFAPLLGFIInh--tYSVRR 128
WP_010871194  59 EKN----------------------ENWYKELVLLKPKLAYNYGKETnrrkkeaL----EKLAGTFSEII-----DKIDN 107
WP_013505650  52 EQIG----------------ADKPYEELLPYIAMVKAKAEYAYKRDK-------In---DGFKRFIQSNI-----DQLCD 100
WP_013747052  54 ERVQqa------------knQDTKFKELLPFIKMLKAKVAYAKGRNH-------Id---ENFVKVFNKVI-----DEIND 106
WP_013799384  73 PE----------------------DEDWIIKFAHLKPMVAYHYGKEKrn---qgL----FELKKLIDAVF-----DKIYN 118
WP_013886476  62 NTIDss------------sdKEKSFNENLPMIYLVASKGAYAKGRKH-------Ig---QNFYNFLSNNI-----TTIDT 114
WP_014162400  69 MMYEiqk-----------kcGDRDSNESFQKIQLLRYHLHYAAKKVQssk--sdA----KNLAALLGAAV-----EKVKQ 126
WP_014373205 128 TKK---FkeaFWRFCDLFEAVLAFHKASGGRA 156
NP_229607    107 PDE-------FEKFKKFYDAILAYHKFHSESE 131
YP_002248477 113 KKD-------FDIFVKFFEAFMGFYRYYDELF 137
WP_013033751 129 VEE-------FDAFCKHFQAVVAFHKFYGKKK 153
WP_010871194 108 DLNk------FKNFKTFFEALVAYHKIYAKSQ 133
WP_013505650 101 SRKvd----dFFIFCSLFEAVVAYSKGNLSN- 127
WP_013747052 107 RET-------LRDAKLFMEAVIGYCKLYELTN 131
WP_013799384 119 ENDenkRkemFKHFKKFFEAIIAYKRFYEGK- 149
WP_013886476 115 LDD-------FEKFISYFEAILGYYRYLNPKE 139
WP_014162400 127 PED-------LLRLKYLSEAIVAYHKSYKSNE 151
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