Conserved Protein Domain Family
Phage_holin_3_6

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pfam07332: Phage_holin_3_6 
Putative Actinobacterial Holin-X, holin superfamily III
Phage_holin_3_6 is a family of small hydrophobic proteins with two or three transmembrane domains of the Hol-X family. Holin proteins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.
Statistics
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PSSM-Id: 462148
Aligned: 266 rows
Threshold Bit Score: 30.5798
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CBL57567        11 IATIKGAIPKMIAGIKELAKAELVPSAKHAGIGGGLFGGAGASAFFAFKCLLWAA--TFGVANFyhYvagrDWFTALA-L 87 
CAK27238        10 tGKLASLVVSVMDLHVRIALKEVDREKRRLIVGALLMGTALVLLTGALLVAHAAL--VIVLVEGaaL----DWLTAFLvV 83 
WP_015109094     6 FARVTALLSSVMDLHVRIALQEADKEKRRLVGGGVMLGMGLTLMTLALVAAELVL--LLWIREVfaL----SWLQAAAaV 79  Cyanobium gra...
Q7V5I0          13 gaRVTAIAASVMDLHVRIALQEVDREKRRLISGGVFLAMGGTLMLLALLAVEVAL--VLWMQQVwgW----SLMKGLLaI 86  Prochlorococc...
Q46HX4          13 aARVTALASSVMDLHVRIALQEMDREKRRLISGVIFLATGGVLMLFALVGSELIL--GYWLRDLleI----DNKSTILiL 86  Prochlorococc...
Q7VEE7          13 aARVTALASSIMDLHVRIALKEVDREKRRLISGGIFLAIGGILMLFTLLAIQIII--ILWMQNAfnW----NIETSLLiI 86  Prochlorococc...
WP_011934011    18 aaRVTALAGSVMDLHVRIALQEVDREKRRLISGGVFLAMGGTLMLLALVAAEAAL--LVWVLEAweW----SLLQALLgL 91  Synechococcus...
WP_011872705    19 VAELARNTFGLLMSRIELAALELAEVRANALKLALLFALGVVIAFFAIGYWTVLIayLsw-----------------pvL 81  Herminiimonas...
jgi:Plim_0415   30 litIVHECLKLADLQLQLFQMDIVEFWKRSQLALGLFSLGSALLLGSLPIALMAI--A-------------AWLKTTVgL 94 
jgi:Plabr_1081  14 VMALARDVIKLADLQLQMFTLDVREFWSRAKISSIVLVLGAVTALGTIPVMLLGL--A-------------RLLATAFdV 78 
CBL57567        88 afv----tfA-VIALVLAAVMGLIGWL---QVKK--VK---MPTATIEETKASISALS 132
CAK27238        84 ---------G-AIDLVLAGLLLRIGGQ---LLKGp-----yLPE-TAAGISRTTRTLl 122
WP_015109094    80 ---------A-AVDVVLAGISLRIGGQ---MLKGp-----yLPQ-TTAGLMRTTRAIt 118 Cyanobium gracile
Q7V5I0          87 ---------A-VLDVVLAGVSLRMGGQ---LAKGp-----yLPQ-TLEGLSKTTRAVl 125 Prochlorococcus marinus str. MIT 9313
Q46HX4          87 ---------V-FLNLVLAGMSLRIGGY---LAKGp-----yLPE-TLEGIAKTTKAVl 125 Prochlorococcus marinus str. NATL2A
Q7VEE7          87 ---------A-LIDITLAGLSLRLGGY---LTKGp-----yLPE-TLEGLSKSTKAVf 125 Prochlorococcus marinus
WP_011934011    92 ---------A-VLNLVVAGISLRVGGM---LAKGp-----yLPQ-TLEGLSRTTRAVl 130 Synechococcus sp. BMK-MC-1
WP_011872705    82 ---------GwKILLILALVFTVITGGifyYLKSliEQgklSMPATMEELRNDHDALl 130 Herminiimonas arsenicoxydans
jgi:Plim_0415   95 sqeaslactA-AMGVIIAVTTLAWAVM---RLQR---Ai-ePLASNQEEFRANLQWMR 144
jgi:Plabr_1081  79 piawmqagvG-AFVLIFAVVLMRMAVS---KMSD---Ag-qALKRSQVELHKNLEWMR 128
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