4YGT


Conserved Protein Domain Family
DUF4309
?
pfam14172: DUF4309 
Domain of unknown function (DUF4309)
This family includes the B. subtilis YjgB protein, which is functionally uncharacterized. This is not a homolog of E. coli YjgB. Expression of B. subtilis YjgB is regulated by the alternative transcription factor sigma-B. This family is found in bacteria, and is approximately 140 amino acids in length.
Links
?
Statistics
?
PSSM-Id: 464097
Aligned: 20 rows
Threshold Bit Score: 76.9623
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
4YGT_A              20 VKNLYNTAYKGEXPQqaQGLTINKSTKGDVHAAFGEPERPVGGDNRFDlYHWNXGQPGYGFSYhKDXTISEIRYFgtgve 99  Bacillus ...
WP_015893458       118 LSQIRSNAQEGRVIS--LPFVLEKT-IDDIEKGWGKPEKTY---TANGlIYSAYPKKEVVFGYnKGMQLVDMHRT----- 186 Brevibaci...
WP_012809550       107 VRSVMQAALRGSLPG--VPFADGEN-IDQVIKAWGSPSSQAY--AGSG-VYFTYRAKDVAFGLnKGEQIFDVRSY----- 175 Alicyclob...
WP_015734639        57 LNSFYKPALKGQFPGavSGLTIGKSTKQDVYKAIGEPSVPGKDADAFDvYGANMGNPGYAFSY-KLNKIREMRYFgtnve 135 Paenibaci...
WP_015845221        51 LMSFYKPALNGQFPNf-HGFTIGSTTHESVIKAIGEAESPAKDSDDFDvYHSEMGHPGYAISY-KLGKIKEMRYFgtnve 128 Paenibaci...
ABV61410            47 LNTIYELAHKGQMPYyaKGFKIGVQTKKDVHHKLGNP-YPETGQSSFDlYHAEMGNPGFAFHYdAKGKIDEIRYFgtnve 125
BAH46582            45 LEKVKNGQLEGVLIG------IGAT-KKEVLDKIGTPVKSGNSEYGFTvNYEGFH---LQF-EdYAKSIDEVKDTskvvl 113
tigr:GBAA_2883      76 VKNLFELAKEGKVPN--VPFAAHTGDIEEIEKAWGKADKTE--QAGNG-MYATFTNKNVSFGFnKGSQVFDVRSY----- 145
sklacau:PSAB_05450  92 LQELLELAKQGKAPG--IPFAAHTDLIDDVKKAWGEPEKEE--SAGKG-IYATYNAKHVVIGFnKGSLIFDVRSS----- 161
Q8XI71              88 LKDIKEKALKGEIID--YDFKLGDS-IYDVIDKLGKPSSENYVAEAKG-NYFNFDSYNLSFGCnKGDQIFEIRSL----- 158 Clostridi...

4YGT_A             100 rQLNLGGVTP----EVLQKQLGPVNRVLTVPft--dEIDYVYDTG-RYE-----LHFVIGTD--Qt-------ADHVNL 157 Bacillus s...
WP_015893458       187 -DSRLQQISL----SAVEKIWGKPS---RISef-gdRTIYTYDVTsKYQ-----VKLIFQGT--Kstnkedlilveyql 249 Brevibacil...
WP_012809550       176 -AQALRTLTY----HEIAGVLGAPG-SVRYTq---dSYIYLYPAGpDYQ-----LLWVFPRL--Psghs-gptVDHVSV 237 Alicycloba...
WP_015734639       136 rQTNIGGITM----KMLKKNWFAPDATTTFKngktkQTKLTYHRG-AYK-----LEFIFNSS--Td-------LDHINL 195 Paenibacil...
WP_015845221       129 rQTNLGGISV----KMLVQHWGTPNESVQIKsgktvQKKITYVRG-KYQ-----LEFIFDGTngTn-------LNHINL 190 Paenibacil...
ABV61410           126 kETNIGGMTP----SLLKKQLGQADSVSTIPqt--kEKKYVYRTG-DYE-----LEFIVGHD--PdisqqkltVLHINL 190
BAH46582           114 mNAEPKTVGMtgkpEEIKRTLGEPS--REFMddsgdHTFIL-----EYEnngnlLRFTFDSKesP--------VKYVTL 177
tigr:GBAA_2883     146 -HAELKSITL----QEIEKALGKPN-SVKGNg---eDKIYVYKVNkQFE-----LKFIIPKS--Tg------kVNHISV 202
sklacau:PSAB_05450 162 -AADLQQLTL----KQIEEALGKPN-DVKTSg---nDSIYIYNAGaQYQ-----LKFVILKS--Tg------qVDHISV 218
Q8XI71             159 -NKDLKSLDL----NNVENFFGKPDYTVTTKs---kEKIIGYKITkDFK-----ILFVFNTS--Ty------kLDHYSV 216 Clostridiu...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap