1S5U


Conserved Protein Domain Family
thio_ybgC

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TIGR02799: thio_ybgC 
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tol-pal system-associated acyl-CoA thioesterase
The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import of certain organics but also in the maintenance of outer membrane integrity (by an unknown mechanism).
Statistics
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PSSM-Id: 274304
Aligned: 25 rows
Threshold Bit Score: 170.856
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1S5U_A             8 FRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQ--QA-LMAE-----R-VAFVVRKMTVEYYAPARLDDML 78  Escherichia...
AAK25196          14 HQLPVRIYYEDTDFTGIVYHANYLRYLERGRSDFFRAVGISHteLA-KQDT-----G---FAVIRMELDFKRAARIDDAL 84  Caulobacter...
AAL44528          17 HRLTQRVYYEDTDFSGLVYHARYLHFLERGRTDYLRCLGCEQsaLL-TADE-----EgLVFVVHRMEIDFKTPARMDDVL 90  Agrobacteri...
AAV96348           3 HVFPVRVYYEDTDMGGIVYHANYLRYIERARSDWVRNLGNDQn-AM-R-EA-----G-LVWVVRKIEAEYLAPARFEDDL 73  Ruegeria po...
jgi:Daro_4057     10 FSIPVRVYYEDTDAGGVVYYANYLKFFERCRTEWMRFAGHDQs-AL-ASEA-----G-IGFVARKASCEYLKPARLDDEL 81  Dechloromon...
CAD84125           5 FVHPVRIYYQDTDAGGVVYHASYLNFLERARYEWLRELGFTVd-TM-IRSH-----K-MIFLIRSLGIEYFKPAVLDDLL 76  Nitrosomona...
goetting:GOX1683   4 HKIRFRVYYEDTDAGGIVYHARYLGFAERARSEAMRDADASVt-EL-LNDF-----G-LVFVVRQAALRYRSPLRLDDEM 75  Gluconobact...
cucgc:lpg1575      7 HQHNIRVYAEDVDYMGIVYHANYLCYLERARTELLRQNNLIL--SE-FEKS-----D-ILFAIHELTINYVFPARLDDQL 77  Legionella ...
WP_012255805      20 HRLPLRIYYEDTDFSGFVYHASYLRFMERGRTELLRTLAGDQs-EMhAEGT-----G-LVFVVRKMTLDFLKPARMDDWI 92  Methylobact...
WP_011315922      19 HHMQIRVYYEDTDFSGLVYHASYLRFMERGRSNYLRLLGADQr-AL-FAETeseapG-FAFVVRSMHLDFLKPAHMDDIL 95  Nitrobacter...
1S5U_A            79 EIQTEITSMRGTSLVFTQRIVn---AENTLLNEAeVLVVCVDPlKMKPRALPKSIVAE 133 Escherichia coli
AAK25196          85 LVRTLFERAEGVRLHVRQTIT----RGDEVLFEAtVVAVCISL-SGRPRRPTPDMLAK 137 Caulobacter crescentus CB15
AAL44528          91 TITTVTEKAGGAKMVLNQEVR----RGETLLVAAkVIIAVINA-KGRPRRLPETVAEK 143 Agrobacterium tumefaciens str. C58
AAV96348          74 TVLTEVVALSGARLTMAQSVR----RAEAEIFRAtVTAVCMNG-EGRPVRLPAEIRAL 126 Ruegeria pomeroyi DSS-3
jgi:Daro_4057     82 IVGLEVEKLTRVRVIFRQHVR----RGDVELVTGtVEIACVNMaTMTPAAIPDFLHQK 135 Dechloromonas aromatica RCB
CAD84125          77 DITVQVVDIGRSRITLQQQIL----REQGTLASAtVHAVCVGAeTLKPISIPAPLRQK 130 Nitrosomonas europaea ATCC 19718
goetting:GOX1683  76 EIETALEAMTPTRLKLCQTVRnysgGGDTATVID-VELACLNAaDMKPAKIPPRWRDA 132 Gluconobacter oxydans 621H
cucgc:lpg1575     78 TIKTEIKEFRACSFLFNQEISn---QHKQLICRAsVQVVCVGs-NLKPKRLPNIMRNE 131 Legionella pneumophila subsp. pne...
WP_012255805      93 EVHTRSSELRGASMHLAQEVR----RGDEVLVRAdVVVACVR--DGRAIRLPEGLRRA 144 Methylobacterium extorquens
WP_011315922      96 DIVTRPLEVRGASITLHQEVK----RGDTLLLDArVRVAFIs--DGRAKPIPRPLRIA 147 Nitrobacter winogradskyi
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