2CWS,4OZX


Conserved Protein Domain Family
Alginate_lyase2

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pfam08787: Alginate_lyase2 
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Alginate lyase
Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of pfam05426.
Statistics
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PSSM-Id: 400923
Aligned: 66 rows
Threshold Bit Score: 91.2894
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2CWS_A              10 FDL---SHWKLQLPdaNTTEISSANLGLg---YTSQYFYTDTdGAmtfwapttggTTANSSYPRSELREMLdPSNSKVNW 83  Sphingomo...
Q21FK2             337 WDLegeNPHPLVDP--YTLEFVPLEARV---------------------------TTPNGNGWRHEYKIAS----SERTA 383 Saccharop...
Q9Z6D6             183 FDLegnNPHPLVNS--NTLEFVPLEARH---------------------------ITPNGNGWRHEYKVKE----SARAA 229 Pseudoalt...
Q39962              40 VPLt-eDNFVIQKPy----dKPLNDRYSykngIRRLWVYENDkPF----------KVGSPTRPRTEIRIKG-HDYSSGVW 103 rubber tree
WGS:AAAA:OsI_37595  37 VELt-gDMFKLHKPy----dLPPEQRYEfrdgVRRMWVLCSDrPF----------SPGSTTKPRSEILLNK--TYTSGVW 99 
Q2QX90              37 VELt-gDMFKLHKPy----dLPPEQRYEfrdgVRRMWVLCSDrPF----------SPGSTTKPRSEI------------- 88  Japanese ...
WGS:AAAA:OsI_37628  30 VSLg-dGNFQLQWPy----dVESSSRYSfdgtVRRLWVFSDDkPF----------KPQSGTNPRTEIRMTG-YDYSSGVW 93 
Q94CJ4              35 LPLd-qSNLDIQRPy----nVPVSKRYSfvngVHKMWVYKTDkPH----------SPDSHTNPRTEIRIRG-YDFSSGVW 98  Angelica ...
Q8H9C1              38 ISIs-qSNFEIQKPy----dVPVNQRYSfidgVHKFWVYKTDkPH----------TTSSQTKPRSEIRITG-NDYSSGVR 101 potato
KHN09576            36 LGLsssSNLQIQKPy----dVAVNERYSfsngVHRFWVYSTDkPH----------MQGSNTKPRTEIRIAG-YDYTSGVW 100
2CWS_A              84 GWQGTHTMKLSGKTVQLPSSgkIIVAQIHGIMddgtnAPPLvKAVF----QDG-----------QLDMQVKqnsDGTGSD 148 Sphingomo...
Q21FK2             384 MTATYEDFSATIKVDLSTGGk-TIVAQHHAGD-----TGTImKLYVsdtsESGffdsvaangifDVYVRIR---NTSGVE 454 Saccharop...
Q9Z6D6             230 MTETYEVFEATVKVEMSDGGk-TIISQHHASD-----TGTIsKVYVsdtdESGfddsvagngifDVYVRLR---NTSGKE 300 Pseudoalt...
Q39962             104 ------QFEGQVHVPEGTSG--VTVMQVFGavn--kaTALQlRV------YNG-----------DLKSYKS------NSV 150 rubber tree
WGS:AAAA:OsI_37595 100 ------QFEAYGYVPSGTTG--VSILQAFGasg--rnTTLMlHV------YGG-----------RLMYYHD----EARVV 148
Q2QX90              89 ------------------------LLNVFGasg--rnTTLMlHV------YGG-----------RLMYYHD----EARVV 121 Japanese ...
WGS:AAAA:OsI_37628  94 ------QFEGTGYVPSGTTG--VSIMQVFGgg---taTTLMlHV------YGG-----------DLWYYHQ------QVV 139
Q94CJ4              99 ------QFEADGYVPEVTSG--ASIMQIFGgsp--haTTLMlWT------YKG-----------TLSYYRN------PVL 145 Angelica ...
Q8H9C1             102 ------QFEGYFYVPSGSSG--VSIMQVFGasp--ssTTLMlRV------YDG-----------NLYYYRE------KLI 148 potato
KHN09576           101 ------QFQGFFYVPSGTSG--VCIQQVFGgvt--saTTSQtRV------YGG-----------SLTHYQS------PTL 147
2CWS_A             149 VHNYFTGIKLGDLYNMEIR---VTDGVAYVTMNGD--TRSVDfvgkdAGWKNLKYYFKAGNYVQ---DNTSTGG------ 214 Sphingomo...
Q21FK2             455 EKKPLGTIRSGDSFSFHVL---NNYGVVKVSAFGK--NLET------EVEDDSASYLKFGNYLQsqyPQGSKDCgshgds 523 Saccharop...
Q9Z6D6             301 EKHALGTIRSGGSFNLKVV---NNYGDVDVTALGT--TFGI------PVEDDSESYFKFGNYLQsqdPYTLDECgesgns 369 Pseudoalt...
Q39962             151 ATDIYN-----KWLRVNVIh-kVGKGEITVFINGQ--QKLVV-----NDDGPAEHYFKCGVYAApdg-----------ss 206 rubber tree
WGS:AAAA:OsI_37595 149 DGDIYD-----RWFRLNVVhdvAGVGKLAVFVDGE--RRLQA------------LLQVRGVRAE---------------- 193
Q2QX90             122 DGDIYD-----RWFRLNVVhdvAGVGKLAVFVDGE--RRLAV-----PGHGGYRHYFKFVVYVQrdp------------s 177 Japanese ...
WGS:AAAA:OsI_37628 140 ETNIYD-----RWFRLNVIh-dVAASQLTVFIDGR--ERLRV-----AGKGGDSHYFKFGVYMQtnp------------s 194
Q94CJ4             146 VNNIYG-----RWFRLNVIy-dVDANKVQVYIDGD--LKFGT-----AGRGGESFFFKCGVYAQdga------------s 200 Angelica ...
Q8H9C1             149 ESNIYN-----RWIRLNVIh-dVGASKLKVYINGN--LKHEP-----SGRGGDHHYFKFGVYTQdne------------s 203 potato
KHN09576           148 EPNIYN-----RWIRFNVIh-dVGANNVKIFLNGEdnPRYNG-----PGRGASTHYFKFGVYAQdga------------s 204
2CWS_A             215 -SAIAKLYSLSVSH 227 Sphingomonas sp. A1
Q21FK2             524 dSFRACYEDIGITE 537 Saccharophagus degradans 2-40
Q9Z6D6             370 dSFKECFKDLGITK 383 Pseudoalteromonas sp. IAM14594
Q39962             207 nYMESRWKNIKLYK 220 rubber tree
WGS:AAAA:OsI_37595 194 --GPLPLYGVAVER 205
Q2QX90             178 hYMESRWRDVKVYT 191 Japanese rice
WGS:AAAA:OsI_37628 195 nRMESRWKGISILN 208
Q94CJ4             201 dYMESRWKNIKVLK 214 Angelica dahurica
Q8H9C1             204 dLMESRWRGIKLFK 217 potato
KHN09576           205 nYMESRWRDIQIFK 218
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