Conserved Protein Domain Family
SucB_Actino
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TIGR02927: SucB_Actino 
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Links
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Statistics
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PSSM-Id: 200219
Aligned: 3 rows
Threshold Bit Score: 759.163
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
BAC18908       1 MAFSVEMPELGESVTEGTITQWLKAVGDTVEVDEPLLEVSTDKVDTEIPSPVAGVILEIKAEEDDTVDVGGIIAIIGEEG 80  Corynebacterium...
WP_011729702   1 MAISVQMPALGESVTEGTVTRWLKQEGDTVELDEPLLEVSTDKVDTEIPSPAAGVLTKIVAQEDDTVEIGGELAVIGEAG 80  Mycobacterium s...
WP_009747345   1 MSESVKMPALGESVTEGTVSSWLKAVGDTVEADEPLLEVATDKVDTEVPSPASGVLLEIRVPEDETVEVGTVLAIIGDPS 80  Actinomyces sp....

BAC18908      81 EE----GAESTEAPAEQEEAPAEEAPKEEPKK-------QAPA-------SSGAATDVEMPELGESVTEGTITQWLKAVG 142 Corynebacterium...
WP_011729702  81 EAsaeaPSEDSAPAPEPEPEPEPEPQQTQPTAapaesveSAPAessapsqGGGSATPILMPELGESVTEGTVTRWLKNVG 160 Mycobacterium s...
WP_009747345  81 EA----GSAPAPAAPAPQAAPEPP--APAPTPa-----aEAPApaapqagGSAEGTEVKMPALGESVTEGTVSSWLKAVG 149 Actinomyces sp....

BAC18908     143 DTIEVDEPLLEVSTDKVDTEIPSPVAGTIVEILAEEDDTVDVGAVIARIGDANAAPAEdaPAEEEAPAQNEAPVEETPDV 222 Corynebacterium...
WP_011729702 161 DKVEVDEPIVEVSTDKVDTEIPSPVAGTLLSITANEDDVVEVGGELAKIGDAGAAAEP--KPEPKPEPKAEPKPEPKPEP 238 Mycobacterium s...
WP_009747345 150 DTVEADEPLLEVATDKVDTEVPSPASGVLLEIRVPEDETVEVGTVLAIIGD-----------------PSDAGSAPA--P 210 Actinomyces sp....

BAC18908     223 TKDEAKKVEQdepKAEKAEKKSEPKAAPQKTNTDNVPYVTPLVRKLAEKHGVDLNSVKGTGIGGRIRKQDVLAAASGESA 302 Corynebacterium...
WP_011729702 239 KPEPKAEPKP---EPKPEPKPEPKAEPAPAASSDGSPYVTPLVRKLAAENGIDLSTVKGTGVGGRIRKQDVLAAAEKAKE 315 Mycobacterium s...
WP_009747345 211 AARAPHAAPDppaPAPAPAATAAPAAAAPVSSGASGSYVTPIVRKLAKDKGVDLSTVTGTGVGGRIRKQDVEAAAKAAEE 290 Actinomyces sp....

BAC18908     303 PAE---KEAASAAPASA-ASTKSV----DPEKAKLRGTTQKVNRIREITARKTVEALQISAQLTQLHEVDMTRVAELRKS 374 Corynebacterium...
WP_011729702 316 AKQapaASPAAAAPAAPaAASATP----APALAHLRGTTQKANRIRQITAKKTRESLQATAQLTQTHEVDMTKIVALRAR 391 Mycobacterium s...
WP_009747345 291 ARAaaaAPAPATEASAPaAAAKPAsakpEVDTT-LRGRTEKMSRLRQVIADRMIDSLQTSAQLTTVVEVDVTRVAALRAR 369 Actinomyces sp....

BAC18908     375 NKPAFQEKHGVNLTYLPFFVKAVVEALVAHPNVNASYNAETKEMTYHASVNMSIAVDTPAGLLTPVIHNAQDLSLPEIAK 454 Corynebacterium...
WP_011729702 392 AKAEFAEREGVNLTFLPFIARAVIDALKIHPNVNASYNEDTKEITYYDAEHLGFAVDTDQGLLSPVIHNAGDLSLGGLAR 471 Mycobacterium s...
WP_009747345 370 AKNDFLAKNGTKLTFLPFFVQAATEALKAHPKINASI--EGKNVTYHDVEHVGIAVDTPRGLLVPVVKNAGDLNIPGLAK 447 Actinomyces sp....

BAC18908     455 AIVDLADRARNNKLKPNDLSGGTFTITNIGSEGALSDTPILIPPQAGILGTGAIVKRPVVIT-EDGIDSIAIRQMVHLPL 533 Corynebacterium...
WP_011729702 472 AIADIAARARSGNLKPDELAGGTFTITNIGSQGALFDTPILVPPQAAMLGTGAIVKRPRVIVdEYGNESIGVRSVCYLPL 551 Mycobacterium s...
WP_009747345 448 RINDLAARTRDNKVNPDELSGSTFTITNTGSGGALFDTPIINQPEVAILGLGAIQRQPRVIKdADGGEVIAIRSVCYLAL 527 Actinomyces sp....

BAC18908     534 TYDHQVVDGADAGRFMTTIKDRLETANFEGDLEL 567 Corynebacterium efficiens YS-314
WP_011729702 552 TYDHRLIDGADAGRFLTTIKRRLEEGAFEADLGL 585 Mycobacterium smegmatis
WP_009747345 528 SYDHRLVDGADAARYLMTVKKRLEEGDFGGELGL 561 Actinomyces sp. oral taxon 175
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