Conserved Protein Domain Family
hfq

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PRK00395: hfq 
RNA-binding protein Hfq; Provisional
Links
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Statistics
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PSSM-Id: 179001
Aligned: 295 rows
Threshold Bit Score: 123.878
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
146310020   1 MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTV-SQMVYKHAISTVVPSRPVSHHSnnagggt 79 
295706197   1 MKQSVNIQDQFLNQLRKENIYVTVFLLNGFQLRGLIKGFDNFTVLIESEGkQQLIYKHAISTFVPNKNITVEL------- 73 
15614928    1 MKSSVNIQDHFLNQLRKENIPVTVFLLNGFQLRGLVKGFDNFTVILETEGkQQLVYKHAISTFAPQRNVQMKT------- 73 
56963948    1 MKATVNIQDQFLNQLRKESIPVTVFLLNGFQLRGQVKGFDNFTVIVETEGrQQLVYKHAISTFAPQKNVQLKN------- 73 
288556895   1 MKQSINIQDQFLNQLRKENISVTVFLLNGFQLRGHVKGFDNFTIILESEGkQQLVYKHAISTFAPQRNVQLKS------- 73 
56419848    1 MKNTINIQDQFLNQLRKEGIQVTVFLLNGFQLRGYIKGFDNFTVLLEVQGkQQLIYKHAISTFAPERNIHFET------- 73 
138894832  18 MKNTINIQDQFLNQLRKEGIQVTVFLLNGFQLRGYIKGFDNFTVLLEVQGkQQLIYKHAISTFAPERNIQFET------- 90 
239826718   1 MKNSINIQDQFLNQLRKDGTQVTVFLLNGYQLKGYIKGFDNFTVLLEVQGkQQLIYKHAISTFAPEKNVRFET------- 73 
261419519   1 MKNTINIQDQFLNQLRKEGIQVTVFLLNGFQLRGYIKGFDNFTVLLEVQGkQQLIYKHAISTFAPERNIHFET------- 73 
297530511   1 MKNTINIQDQFLNQLRKEGIQVTVFLLNGFQLRGYIKGFDNFTVLLEVQGkQQLIYKHAISTFAPERNIHFET------- 73 
146310020  80 gsnfhhgsnaqgssapaqdSDETE 103
295706197  74 -----------------------E 74 
15614928   74 -------------------ENEPS 78 
56963948   74 --------------------EAEV 77 
288556895  74 ---------------------DEV 76 
56419848   74 ----------------------EQ 75 
138894832  91 ----------------------EQ 92 
239826718  74 -----------------------E 74 
261419519  74 ----------------------EQ 75 
297530511  74 ----------------------EQ 75 
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