Conserved Protein Domain Family
Cas6f

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COG5935: Cas6f 
CRISPR-Cas system endoribonuclease Cas6f/Csy4, RAMP superfamily [Defense mechanisms]
CRISPR-Cas system endoribonuclease Cas6f/Csy4, RAMP superfamily is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 444633
Aligned: 44 rows
Threshold Bit Score: 145.403
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_086934619   1 MNYYQDITLLPDAEANLGFLWHKVYQQIHLALVENKVaehsSAIGLSIPEYNSkadaKAFPLGQKIRLFAkEQAQLERLN 80 
WP_012070375   1 MKHYIDITLLPSDDIGVHFLWSKLMMQVHLALVEIQNeqkqVPVAVSFPKYQPreneKLGFVGNKLRLFAnDKTDLERLN 80 
WP_013032252   2 FSDYFEIQSIGLPEDT-HFILSKLFTRIHGVLKSES-----LNIGLGFPEL------SPRSPGSIVRCFG-TLQELDQLR 68 
WP_013107622   1 MKFYQEITLIPQADISPHAVWSKLYTQLHLAFVEQKDeqdkTIYGVSFPQYRTiadkKIAYLGCKLRVFApTEQALSALN 80 
WP_005540019   4 QTHYIEIKAIPQVDMLQTEVIGFCLQKLHQILPHFE-----GRIGLAFPAYG-----NDKTLGGIIRLFG-TENDCGFIH 72 
WP_013747104   4 LTHYIEIEAIPQIEIAYSEVISFAMQTLHKVLPSFE-----GRIGLGFPQYQ-----RNYGLGRKIRIFG-SEDDLTLLL 72 
WP_013818083   1 MHIYLEITLLPNPEIGLNFLWSKVFQQLHLGFVEMQGgegrSPIGVGFPKYWIk--dAKFGLGDKCRLFAaDEASLERFA 78 
WP_080585418  14 VKFYQELTLLPDAEINENHIWSKLYQQLHLALATQMEdgskGHIGVSFPQYEDg---RKVQLGSKLRIFAeTEAQLEALA 90 
WP_005879970   1 MKHYIEITLTGSPDFPLYHLWSKLYTQLHLALVENRDasdqVNIGVSFPEYYFneekGMGFLGTKLRLFAeDETSLQKID 80 
WP_088621135   1 MKFYMEITLLPNPEIGVHFLLSKVFQQIHLGLVEIQDeqgcVPIGVTFPEYVIg--eKYSVLGSKLRLFAeYEATLRQFN 78 
WP_086934619  81 LNSWLKRF--LDYAHITSIKAVP-DKVDkFVCFSRKQvkgkarIEKDITRSAQHQSTKFN-LPYEECVNtl--------- 147
WP_012070375  81 FGKWLHRL--EDYVHIKSIADVP-NDVIsYESFNRRS------KSGSPDKHIKRRMQRHN-ETWEQAAAf---------- 140
WP_013032252  69 CNSGITHLegRGMISIRPIMAVP-SNAT-AIAYRRDRnae-khLAGFRQRQMRRRIRRAD-CTQKQLGMdfk-------- 136
WP_013107622  81 LDKRLEHL--ADYIHISSIRSVP-DDIKgYANYYRAI------PKMTLDERITHQAKRHG-VPYHKAAE----------- 139
WP_005540019  73 FK--LQSL--RDYALISEVMPIP-EKVRsYRIYQRIQp----kGQSSIRRAEKRLTAQGK--WNEEVLQ----------- 130
WP_013747104  73 LK--IDAL--KNYFIINEIAPIP-EKTT-AVRYQRIQh----kGKSALRRAEKRMKHRKE--FSAEILE----------- 129
WP_013818083  79 APQRLARL--SDYVHCTGIRPVP-EKLSgYAVYRRER------PKTNPERLARRYAKRHG-LDLETALNttvelkapv-g 147
WP_080585418  91 IKKWLQRY--EDYIHMTSIRPVP-KRVHgYAIYRRYH------QEASSMQKARRYAKRHD-VSYDEALK----------- 149
WP_005879970  81 IQKWFVRL--NDCIHITPVCRVPlNEITgYATFSRKH------IKSNAERLARRQMKRHKdLSFHETVQ----------- 141
WP_088621135  79 ASYWLARL--SDYVHCTSIRPVP-EKLSgFATYQREH------PKTNKERLARRYAKRHN-MAFETALHstidltakapp 148
WP_086934619 148 -------rKRPKASFQEEKLPFITVTSLSSGEGdngaknkFRLFIVMKK-ATKESTGTFNCYGLSSqsveeN-ASVPWF 217
WP_012070375 141 -------fKGYSMEKADKDLPFIRMKSLHSDNE-------FCMSIIRKEaAPSNKHIMFNTYGLSA-----E-GVLPKF 199
WP_013032252 137 -----sedRLQ-DNEETKRPPYLLLER--DGRR-------LPIHISTVNlQIDTDICQFSSYGLARkveskY-SAVPMF 199
WP_013107622 140 --------RFENYKEQSLVYPHIQLTSKSNHRS-------YPLHIGKQA-TEVLTDGRFGTYGLSR-----T-SSVPEF 196
WP_005540019 131 --------NMLQKQATQRIYPHAHLKSSSTKQQ-------FILAIKSVH-QTKAVEGVFSAYGLSQ-----T-TTVPHF 187
WP_013747104 130 --------KMEAKQAQIKRYPHVFLKSSSTHQAk------MLLEIRQII-CSKPNEGQFTGYGLSQa---aS-ATVPHF 189
WP_013818083 148 davypatfRYADMAIPSVALPFIRLQSLSGGQT-------FCLWIAKTE-VAEPVVGRFSTYGLSS-----SaATVPEF 213
WP_080585418 150 --------LFP-QECRDKKVPFVQMHSETNQQK-------YRLCIERIV-QESYQDVGFGSYGLDN-----Q-STVPEF 205
WP_005879970 142 --------RYQ-KNLAKSPLPFIQLESLTNSHP-------FKLFIEKKP-AINASLKVFTTYGLSA-----E-STIPEF 197
WP_088621135 149 dadyktqfRYCDMPQKTVATPFIRLTSLSGGQT-------FCLWIKKTV-VAEPSGAAFSSYGLSA-----V-STVPEF 213
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