3UG4


Conserved Protein Domain Family
Alpha-L-AF_C

?
pfam06964: Alpha-L-AF_C 
Alpha-L-arabinofuranosidase C-terminal domain
This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
Statistics
?
PSSM-Id: 462053
Aligned: 229 rows
Threshold Bit Score: 86.4527
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3UG4_A        300 DEWNV---------Wyrvsd----------nkleePY-DLKDGIFACGVLVL-LQKMSDIVPLANLAQLVNALG------ 352  Thermotoga ma...
XP_007777373  448 GEYAV---------Iddaag-----------erleYP-NMQAAVAESVYAIG-MERNSDVVKMAAYAPLLQHLNdyq-wt 504 
B8NKA3        448 GEYSCqq--------------------------dnAWpFMQGSVAEAVYMIG-IERNSDVVKMAAYAPLLQLVNstq-wt 499  Aspergillus f...
XP_007585657  449 GEFSCysnaa---------------------gdrnVLpFMACSVAEAVYMLG-FERNADAVLMSTYAPLLQLFNatqwtp 506 
EHA52317      442 GEYGVarangnevlWkdh--------------larPW--WIASVAEAVFWIG-NERHPDKIYGSAFAPLLQHVDqyq-ws 503 
XP_007929706  455 GEFAV---------VepdgynrsdvtwedgapragAP-FWDGSVAEAIFLLGaVERNADKIIGAAYAPMFQNLNhwq-wi 523 
XP_007580829  509 GEYSV---------YqvdtpdgvvnfsnpsdihvyYP-RMISAIAEGIYALG-AERNPNTVKLNSYAPSLQNRNwyn-wt 576 
EKD16046      514 GEYSV---------Ysidtpsgevd-wsnppdekiMYpRMVSAVSEGVYLLG-AERNPNVVKMSTYAPTLQNWNwyn-wt 581 
DU:RAM_22415 1078 GEYGAqd--------------------------grPTgTLAAAIGEAAFLTG-LERNSDVVIGSMYAPVLVHENqaswpv 1130
Q8G579        558 GEYSA---------Ngyfagq--------pqteqgAN-TWKSALGEAAFLTG-CERNSDVVRMTSYAPLLAHIPakgwaq 618  Bifidobacteri...
3UG4_A        353 AIHTE---KDG-LILTPVYKAFELIVNHSGEKLVKTHVE-SETYNIEGVMFinkmpfsvenaPFLDAAASISEdGK---K 424  Thermotoga ma...
XP_007777373  505 PNLISfnnDPDgLVLSTSYYVQQMFSVNRGHTILPVTAD--SAF------------------GPLYWVASKSD------D 558 
B8NKA3        500 PNLIAftqNPStVIETTSYYVQQMFSVNRGDTIHNVTSD-------SAFG------------PVYWVASSADD------K 554  Aspergillus f...
XP_007585657  507 DLVGYtqaPGG-VVRSTSYFVQQMFAQNWGSSTRAVDSD-------AAFG------------PVYWAASGEDG--G---A 561 
EHA52317      504 PNLISfnaNTSaTTLSTSYHVIKLFSNARFTEVLPVDNS-AEYN------------------PAFWVAGKNAHaNK---F 561 
XP_007929706  524 PDLISfdaDPKhTTLSTSWHVIKLLSGVRMTEILPMD---GAVY------------------DPMYYVGGRSKgRK---S 579 
XP_007580829  577 PDMISyeaDPSkTVLSTSYWQQLLFAHYRGTQTLPVVNT-QGDF------------------NPLYWQSSIED-NG---S 633 
EKD16046      582 PNLIAfdaDPShTVLSTSYYLQKLFNAYRGTESVEVSNS------VGDFG------------PLYWASSMEEG------K 637 
DU:RAM_22415 1131 NLIGL---DAGsSYGSPSYWVQQMFSSTLGKQIVTSRLNqGSPL------------------RQVVNVTTKSG-RK---T 1185
Q8G579        619 NLIEF---NPAhVNPTVNYEVERLFSTHLGDTTYAVSIE-----QTASRPA-----------KHLYVSATGHDrDDacrY 679  Bifidobacteri...
3UG4_A        425 LFIA-VVNYrKED-ALKVPIRVEGL-GQKKAt----VYTL-T--Gp-DVNARN-TMENPNVVDI-TSETI-----TVDtE 486  Thermotoga ma...
XP_007777373  559 GYLI-KMSNyGGA-SHDISVAFPQp-CSGIL------TML-T--G--DQNAQN--TNLTTSVTP-TISDIm----SADg- 616 
B8NKA3        555 YYVK-LANYgAD--TQEITVTISGKtGGKLT-------VLaD--S--DPKAFN--SDTQTLVTP-SESDV-----KAT-N 611  Aspergillus f...
XP_007585657  562 TYLK-VANYgADE--QSVSVSVEGAa----------GATLtTlaG--AQTAEN-SEEAGEVVVPvTSTPD---------G 616 
EHA52317      562 LWKAaVYNVtGDAgEVDFDVVFPGAvEGSSAq----LTVLtS--S--DPLNEN-LLGEADVVVT-ETRNV-------TaG 624 
XP_007929706  580 WVLK-AAVYnATE-NVPFAVKFEGMeVAGRMg---dLTWL-T-----APFNSS-QPLGGNVVET-HVEGIv----SGE-G 641 
XP_007580829  634 LYLK-VV-NaGNR-TIPLSVSIDa--AYSKVn----GTIM-Q--Nd-DINGFN-YVNNQTAIIP-RPLGAngtavPAK-S 697 
EKD16046      638 VFLK-VINInSTVvPLTVDLEt----RWTSVn----GTIMsN--A--DPNGFN-YKDNATAITP-LPLNLt----SLApG 698 
DU:RAM_22415 1186 FTVK-LVNPtPQ--VQTARLALTGVtAVDGTg---tLTTL-T--G--DPAGRN-SLAAPTAIVP-QTREIt----GLA-A 1247
Q8G579        680 IKIVnISDSpVDV-TLEIARGLAGLgASPSRpvrleVTTLsA--NptAKTTIGyRGEASGAIVP--ERRAy----TLP-S 749  Bifidobacteri...
3UG4_A        487 ----F-EHTFKPFS 495  Thermotoga maritima
XP_007777373  617 ---nL-HFIMPGWS 626 
B8NKA3        612 g--kF-TFTLPAWS 622  Aspergillus flavus NRRL3357
XP_007585657  617 sngtF-AFTLPAWS 629 
EHA52317      625 qn-gF-TFKLPQWS 636 
XP_007929706  642 g--gF-EFSLPPYS 652 
XP_007580829  698 sngsF-IWNVPIHS 710 
EKD16046      699 kd-gSwTWNVPAYS 711 
DU:RAM_22415 1248 t----sKLTLPANS 1257
Q8G579        750 ps-sLlAMKIKPYS 762  Bifidobacterium longum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap