2OXL


Conserved Protein Domain Family
YmgB
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pfam10798: YmgB 
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Biofilm development protein YmgB/AriR
YmgB is part of the three gene cluster ymgABC which has a role in biofilm development and stability. YmgB represses biofilm formation in rich medium containing glucose, decreases cellular motility and also protects the cell from acid which indicates that YmgB has an important function in acid-resistance. YmgB binds as a dimer to genes which are important for biofilm formation via a ligand. Due to its important function in acid resistance it is also known as AriR (regulator of acid resistance influenced by indole).
Links
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Statistics
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PSSM-Id: 431503
Aligned: 10 rows
Threshold Bit Score: 73.4686
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2OXL_B            5 EESAVLGQAVTNLXLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADD 63  Escherichia coli
Q6D6C1           23 SDMEMLGNIVEEIIQSGHSVSNKAIIAKLIHKIETEANTAFQEKYRTLLDLIVYKTQDD 81  Pectobacterium atrosepticum
jgi:Rahaq2_4636  25 SEVEILGTLVSGLLASHYPVSNKAIIQGLVRQLEQETNISNQQACRNLLELVLLSTQDD 83 
BAN98536         24 NEMEVLGHLIAEILHSGMPVTNKAIIAALIGRLEQEADVVQLDVYRHLLELVVHQTPDD 82 
KFC99720         62 SETEVLGAAIRAILAEKGKVTNKAIILHLITQLECTSDVVQLDILRSALEMVVGMTPPD 120
WP_013025310     25 SDMEILGLVVAEILQSGMAVNNKAIISKLIHRLELESDEVSLDVYRHLLEMVVYKTPDD 83  Pantoea
ADD79363         26 QETELLGRVIRNIVSDEKRVTNKAIILYLIAELESTDDEFHIELLRRTLEIVVGRTPDD 84 
Q8ZPX7           23 CEQRAIQEITYELLQSQQHVSNKDIIAKLIEKLETEKDVVQLDIYRNALEAVLFQTPDD 81  Salmonella enterica subsp. enteri...
BAN98120         26 SEKEIIALIYKQLAAVKLRVSNKDIILALLERLESEHDVVQLDIYRQALELIVQRTPDD 84 
Q326Q1           18 IESSIINSIANEVLNPISFLSNKDIINVLLRKISSECDLVRKDIYRCALELVVEKTPDD 76  Shigella dysenteriae Sd197
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