Conserved Protein Domain Family
Phage_cap_E

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pfam03864: Phage_cap_E 
Phage major capsid protein E
Major capsid protein E is involved with the stabilization of the condensed form of the DNA molecule in phage heads.
Statistics
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PSSM-Id: 427552
Aligned: 60 rows
Threshold Bit Score: 173.703
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDD64880        9 FTARSLGVMWNNYQkTLgsAPYLGRQKFGTR---KQDSLDLRFIKGKSGLPVSLKASNfDAQAELRDVGGFSDIQNEMPF 85 
Q2SI52          3 YETSTLLSVMQEMD-RN--IPFLLSLFFTEEi--MFDTDEIDFDAIDEDVRIAPFVSP-LVAGQVMKERGSTLKKFKAAY 76  Hahella chejue...
Q8ZMZ8          4 FTTRQLLGYTEQKV-KF--NPLFLSLFFRRTv--TFPTQEVMLDKITGKTPIAAYVSP-VVGGKVLRNRGGETRVLRPGY 77  Salmonella ent...
P03713          4 YTTAQLLAANEQKF-KF--DPLFLRLFFRESy--PFTTEKVYLSQIPGLVNMALYVSP-IVSGEVIRSRGGSTSEFTPGY 77  Escherichia vi...
hku:LHK_01651   4 FATAVLAHVVANLK-RP--KLFLLNSYFGQEq--RETTEEIHFEVEHGRRRIAPFVSP-LRAGQIVTSDGRTVTSLKPAY 77 
CBV44067        6 FDTRTMLEAVEKMK-RS--RRFLTTLFFGAAs-rNFTTQHVDIDIIKGKRKMAPFVRP-NRPGHIVDRAGSVMRSYTPSY 80 
WP_013387488    2 YDLKVLIAALSQSK-KV--NPFLWNLLVKGTk--EHSNTKFEVHVRKSKRKITPFVGP-NLPGVFLGKEEFSINEYQPPM 75  Ilyobacter pol...
BAK99714        6 FDPIYLDAAVEKVP-NV--PSLFKTTFFGGTrerLLPTTDVKVDFKRGARKLAAFVSP-YGKAPVVHKAGYEVKSYETPI 81 
CCY40052        8 YTPRTMGKIIRRMP-PV--HTFFRDTFFKNRq--TFPTKSVDVDFKKGSRALAPFVHP-KIGGKTIPNSGYRTESYTPVL 81 
CBK97778        8 FDTYTLMAVERRAV-PR--QTFFRDRYFGTDdgdIFNSDKVLTEYMDGDRKMAAFVGP-RVGAIPMERVGYEIHEFEPAA 83 
CDD64880       86 YRESYMVTEKEeqeYDNYRSAEN--------SNLAnqVLREISKKPMNLIEGARVVPERQIWSLLApeDGVPKI------ 151
Q2SI52         77 IKPKTPVLPNR---PLK-RRAGEpigg-tltPAQR--MNAIRADILNSQMDSIDRRMEWMAASALR--TGQIIV------ 141 Hahella chejue...
Q8ZMZ8         78 VKPKHEVNYAQ---VVE-RLPGEdpar-lndPAYR--RLRILTDNLKQEEKAIVQVEEMQAVSAVL--NGKYTM------ 142 Salmonella ent...
P03713         78 VKPKHEVNPQM---TLR-RLPDEdpqn-ladPAYR--RRRIIMQNMRDEELAIAQVEEMQAVSAVL--KGKYTM------ 142 Escherichia vi...
hku:LHK_01651  78 IKDKRQFDANA---PMR-RAVGEkigg-alsPEQR--MQANLARDLLDQVSMVDRRLEWMAAQAML--HGRYVI------ 142
CBV44067       81 VKPKLETTAGL---LLNQRSPGEalys-artPLQR--AGEQMARDFDELDDQISRREEWMVAQALT--SGQVNV------ 146
WP_013387488   76 VKPFRVAHANE---LFK-QKFGQtiygdtvtSQDL--ALDTIASELADLDDVITRKEILMLGELLS--TGKMAI------ 141 Ilyobacter pol...
BAK99714       82 VSNKDVTTIQD---ALK-RLPGEllmnsgitPDER--AMRMLIEALTNLEDMIRRREEWMCVQAMM--TGLIPV------ 147
CCY40052       82 VAPNKITTVDD---LLE-RAAGEnpys-grtPAER--AVEKLAEDFAELTEMIVRREEWMAATAIF--TGQIPI------ 146
CBK97778       84 IGVSRELSVDD---LTK-RGFGEaiya-nstPAQR--AARLVQNDLVDMDNRIIRTEEWMCAQTML--ENGCTMqemidn 154
CDD64880      152 --DVVIgKSKYTVEYTADSGAahkadhFVEISGSSDkwn-vpATATPLADLIKTRRDFaKKTGYSLTRFSMNTETWEMVL 228
Q2SI52        142 --SGEK-YPTSVVDFGRDPNLt-----VDVSGGAAAwdq-stS--TPKEDLEDIFALM----KAPCNYVIGGRGAINAFM 206 Hahella chejue...
Q8ZMZ8        143 --QGEQ-FDTVEVDFGRSAGNn-----I-IQATGKKwseqdrETFDPTYDLDMYc----DQASGLINIAVMDGKVWRLLN 209 Salmonella ent...
P03713        143 --TGEA-FDPVEVDMGRSEENn-----I-TQSGGTEwskrdkSTYDPTDDIEAYa----LNASGVVNIIVFDPKGWALFR 209 Escherichia vi...
hku:LHK_01651 143 --KGEG-YPEKMIDFQRSPKLr-----I-VKGQGARwtd-anV--NPLDDLQDWALLAaQESGVYTSEVTMDPAAWKAFR 210
CBV44067      147 --VGDG-V-DDVVDFQMDASHi-----I---TEATPwtd-agG--DPIGNLRKYKRLIaKDSGRTGAAAVLSVEAADAML 211
WP_013387488  142 --QGKG-VSREAISYGTDPEn------FEELLGTDAwnd-agS--DPLADMERWQMLVlKKTGLLIDSIILTPKAKKYFM 209 Ilyobacter pol...
BAK99714      148 --VGEN-V-SYNINFDFTNSTv-----L-----TQKwda-egATCNPIDDLDALCLACrKNGYRNPDVCIMESSAYKAFE 212
CCY40052      147 --IGEG-L-NEVIDFNFTNTEt-----I--VTDALKwts-ptA--DPLADLERWHETVqKNGFVNCNICVMAKDVANAFV 212
CBK97778      155 qtKGE----AKVVKFYNPGHEn-----DHIYTAAHKwne-tdG--DFFGDVPAMCRLLsKRGLRAVD-MLLGADVYDAVL 221
CDD64880      229 NAEDTKKQVLGITAynggirlQQS-QVVEYLRGYG--------IEIEVYDKIYId----PADGKTKYFIPTGIVsaqsAG 295
Q2SI52        207 KHADIKELMETRRgsst-qleTAP--TVNLADYKGrlg--sagPEVWSYQGYYTde-----sgTQQLYIPDDEIilvsMA 276 Hahella chejue...
Q8ZMZ8        210 GFKLFREKLDTRRgsns-qleTAVkDLGAVVSFKGyy----gdLAIVVAKTSYVad-----ngTEKRYLPEGTLvlgnTA 279 Salmonella ent...
P03713        210 SFKAVKEKLDTRRgsns-eleTAVkDLGKAVSYKGmy----gdVAIVVYSGQYVen------gVKKNFLPDNTMvlgnTQ 278 Escherichia vi...
hku:LHK_01651 211 SNPHVEKRWTSLNgnin-gltPAA--AGDGGKFMGsi----dgFDIYTYADWFVdpd----dnTEKPFLPAGSVllssTS 279
CBV44067      212 DNEDFRKKLDTRRidlg-mirPEE--LPDGVTYLGylr--dpgIDLYTYEEWYLd-----dNGVEQPMIPAGGLvvgpTT 281
WP_013387488  210 DHEKVKEKLKYTEsnvl-rvqPRR--LGDGASYLGtip--elnLDIYSYVDWYTnd-----agEEVSILEDGGVlackAK 279 Ilyobacter pol...
BAK99714      213 KRCLALGLLDQKNflnl-evkPSV--VAEGVTFMGkll--kpnLEIYTYDDWYVddwssATA-TTKPLMPKGKIlvgsTS 286
CCY40052      213 NNAKVKEVLDIKGydla-vikPRQ--LPNGLTYIGsvh--kmgLDIYQYNEWYLdnwtdPDAPEDKPLVPDGTLallsTE 287
CBK97778      222 NMEKVQRLLDKNSGiivgkieQEL-SAYDGVTYGGtlnfrgykLNLISVDETYVdt-----anAERRYFPKTDAlvtaP- 294
CDD64880      296 VYLGDYVFGKTPeERSGSLTdgnlsIVETGiavyTYA-----TNHPINTHCVVSMIGLPTFEGMDSVVVIK 361
Q2SI52        277 -VEGVQAFGAI-----LDGEa---gYMPAR----YFPknwpeKD-PPLEYLMTQSSPLTVPKRINGTAKIK 333 Hahella chejuensis KCTC...
Q8ZMZ8        280 -AEGIRCYGAI-----QDSQalaegIVAAT----RYPkhwltVGDPANEYTMTQSAPLMVLPDPDEFVIVT 340 Salmonella enterica sub...
P03713        279 -ARGLRTYGCI-----QDADaqregINASA----RYPknwvtTGDPAREFTMIQSAPLMLLADPDEFVSVQ 339 Escherichia virus Lambda
hku:LHK_01651 280 GLEGYRAFGAI-----RDEKa---gYQALP----YFSkswveED-PAVRWLLMQSAPLVVPYRINASVSAT 337
CBV44067      282 -SRCSMLYGAIQdV--RAIEg---aLFDVD----RYPkswieDD-EGVRFLSMQSAPLPGYHEPDAFVFAT 341
WP_013387488  280 --SVTLHYGAISqIAGESKAr---qIYIGK----RIPkhwvdED-ADLEKIRLAAAPLPVLDDADAIVfsk 340 Ilyobacter polytropus
BAK99714      287 -ADFRMYYGVLAgVNDAGSDf---tFKEGR----RLAeswmeRE-PPQRFLKTSSRPLPCPTEVDSWAVAE 348
CCY40052      288 -ADYSIYYGAVTmLADNGVNf---vTVEGD----KVPqtwveRR-PDRRFLQINSKPLTVPHEVNSWFVAK 349
CBK97778      295 -ACGHLMYGAITqINYGDTKh---sTIAAR----RVPkfsidQE-NDVRKMSLKTRPLAAPKNYIPWIRAk 356
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