Conserved Protein Domain Family
Alr1p-like

?
cd12829: Alr1p-like 
Saccharomyces cerevisiae Alr1p-like subfamily
This eukaryotic subfamily belongs to the Thermotoga maritima CorA (TmCorA)-family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
?
PSSM-Id: 213363
Aligned: 44 rows
Threshold Bit Score: 202.881
Created: 11-Jul-2012
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
  next features
Feature 1:oligomer interface [polypeptide binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                             #  ##                            # #                     
NP_012859  500 WLDVSnpteeEMKILSKAFgIHPLTTEDIflg--------------------evrEKVELFr---------------dYY 544  Saccharomyces ce...
EFW44186   944 WIDVHkptkhDMRMMEHVFnLHPLTTEDVlsd--------------------dtrEKLEVYd---------------nYL 988  Capsaspora owcza...
EAL68196    85 WVDLQsltnsEISEICDILsIHPLTKKDIirq--------------------etrEKCEFFs---------------nHI 129  Dictyostelium di...
EGC35278   181 WIDIFglqddHIITLCKELtIHHLNIDDIleh--------------------dsaEKCEQHt---------------nYH 225  Dictyostelium pu...
EAL51658   123 WLDISpitddCANGIRDIFeLHPLTVDDWftk--------------------esrEKAAFFe---------------nYF 167  Entamoeba histol...
EAL64400   220 WIDIYglqddELITLCKALtIHHLNVEDIlsn--------------------dtnEKCESHd---------------nYL 264  Dictyostelium di...
EGG22605   268 WIDLQgltddQVDIVGHCLgLHSLTTNEIkldg-------------------dtpEKCEEFp---------------eYL 313  Dictyostelium fa...
EIJ94360   116 WLNTFnptdsDLQTLCSMFdIHELTLLDIkeg--------------------ntdEKIEVFk---------------hYT 160  Nematocida paris...
EFA75633  1579 YVSIIs----HIHIIDNEI-NKEMELQDIlssqktierdvmlasgkhivvtssksSKQYSFneilsflkerandvdkeNY 1653 Polysphondylium ...
EAL46257    77 WIDVYgnnekELKTIGELFgIHPLTIDDWlsd--------------------strSKSTIF-----------------DT 119  Entamoeba histol...
Feature 1                                                                                      
NP_012859  545 LICFRsfdivaekhvrrrrkekqesatldhesisrrksqaygatmsnesnannnnstsnasrskwlpsilrarrrssanr 624  Saccharomyces ce...
EFW44186   989 FICLHsyslnem-------------------------------------------------------------------- 1000 Capsaspora owcza...
EAL68196   130 FLVVSeihyap--------------------------------------------------------------------- 140  Dictyostelium di...
EGC35278   226 FIATSemiqks--------------------------------------------------------------------- 236  Dictyostelium pu...
EAL51658   168 AITINemrymd--------------------------------------------------------------------- 178  Entamoeba histol...
EAL64400   265 FIATSemgrhstnasknrglykpnhytnnkqqqys--------------------------------------------- 299  Dictyostelium di...
EGG22605   314 LVICSelvqsrg-------------------------------------------------------------------- 325  Dictyostelium fa...
EIJ94360   161 FISMKlmvea---------------------------------------------------------------------- 170  Nematocida paris...
EFA75633  1654 WIDFQ--------------------------------------------------------------------------- 1658 Polysphondylium ...
EAL46257   120 YYELSdkelfyq-------------------------------------------------------------------- 131  Entamoeba histol...
Feature 1                                                                          #   #       
NP_012859  625 ttntssssykrrvksekkkmeenekfkrksgdrhkpregelePLNVYIIVFrtGVLTFHFAPt-PHPINVRRRARLLkdy 703  Saccharomyces ce...
EFW44186  1001 ------------------------------------dyslndNGLVFVCLFanYVITFHDVVs-PPITRVYQRLKRKas- 1042 Capsaspora owcza...
EAL68196   141 ------------------------------------gsnvlvAGTLNMLLFprIVFTFHQEElqSTYQVIRMMKYNQsgg 184  Dictyostelium di...
EGC35278   237 -------------------------------------nkdlhENNFYMLLFsrLIFVLHNKEl-DCFSQVFKSFRYLnns 278  Dictyostelium pu...
EAL51658   179 ------------------------------------dtnilkTYLLYIVIQknIVLTVHSEPi-IAVNEVRTRISKKyqg 221  Entamoeba histol...
EAL64400   300 -------------ssstssyinnrnrnnnnnnnenniykeliENFFYMFLFkrIIFVLHSVEldSFNDVFKSFRHLKnek 366  Dictyostelium di...
EGG22605   326 ------------------------------------kgnqlrENLFYLVLFsdYIVVFHKHPl-SCFDHVVNSFKYLsrs 368  Dictyostelium fa...
EIJ94360   171 -------------------------------------dptndDIDFNILVFkdFVLTFHDKPw-ISVQDTFNFIELLsah 212  Nematocida paris...
EFA75633  1659 ------------------------------------------ALDEIEISTicTLLGIHPLTkrDIIQQVVRMIKYSetg 1696 Polysphondylium ...
EAL46257   132 -----------------------------------tdsnildYSSINITMRdtFVLTVHSKHl-HAIKKVKDKISLHyte 175  Entamoeba histol...
Feature 1              #  #       #  #   #     ##  #                                           
NP_012859  704 --lnvTSDWIAYALIDDITDAFAPMIELIEDEVYEIEDAIlkmhqsddssdsdssdsdsdsgasdedafpfdvyskktsy 781  Saccharomyces ce...
EFW44186  1043 ---hvRPDWVVYFVLDEIVELHGPPVDVSEAEVESIDDLVvtlsg----------------------------------- 1084 Capsaspora owcza...
EAL68196   185 ---lpSSGWMIYAFLDSIVDIYIDLVDKIMLETQSLDELVlvlsg----------------------------------- 226  Dictyostelium di...
EGC35278   279 gttlqSSEWIMCSFFDAVTDLAAIEADNMLNEVNALDDLStfsed----------------------------------- 323  Dictyostelium pu...
EAL51658   222 --sfpSAHWVLYAILELIISNYSLINENLYSDVETIEQLSlvsih----------------------------------- 264  Entamoeba histol...
EAL64400   367 k-fltSPEWVLCNFLDSINDLISLESDRMMTEISKLDELCdlkesdnddgddyyyddddfnnntkrrnkgfin------k 439  Dictyostelium di...
EGG22605   369 --qlsSSQWLLFAFFDAVNEGYSELYENITKEVEVLEDFSfldfee---------------------------------- 412  Dictyostelium fa...
EIJ94360   213 --tplTPSWVLYSIIIEFLQDIKYLSDGCTAATSEIQALSktfke----------------------------------- 255  Nematocida paris...
EFA75633  1697 --alsSSAWVIYAFLESIVDLYVDLVDNIMLETESLDELVlilsg----------------------------------- 1739 Polysphondylium ...
EAL46257   176 --slpSAQWVMYALLMDIIKGYKLIMKHIEEDLDTFEKLAefmis----------------------------------- 218  Entamoeba histol...
Feature 1                                      ##  #  ##  #   #                             ## 
NP_012859  782 ssakssvssrsmstseasfnanligwkrkgdMLRRIGECRKRVMSILRLLGSKADVIKGFAKRyneqweaspqseIAMYL 861  Saccharomyces ce...
EFW44186  1085 --------------------------seqadFLRRTGQARKRLTDLYRRLHPKREILSSLLSRpmph----vsknTMLYF 1134 Capsaspora owcza...
EAL68196   227 --------------------------ikqneLFTRIGLAGRRVTNLHSGVFGKSEIISVLLRDekli-----pidMMRYL 275  Dictyostelium di...
EGC35278   324 --------------------------ighqdLYIRIGKATRRNTTLLSNLFNKEVVLSSLSRQihf------tieTKIYL 371  Dictyostelium pu...
EAL51658   265 --------------------------ndqdeFLGRIGDLKKRAKILQFLVLAKKSFLRFILKSkskm----vsknLKIYL 314  Entamoeba histol...
EAL64400   440 ilnffndgggggsdnggggggksddyinsteLYIRIGKASKRNTNILSNLFNKDVLLSSLSRQsfs------lrdTKIFV 513  Dictyostelium di...
EGG22605   413 --------------------------vefneTYIRLGRASRHSTQILLSLLIKNDILSSILRGtin-------keTSVHL 459  Dictyostelium fa...
EIJ94360   256 --------------------------admasLLKKNFTVSCQVNSLQITTRYKIEILTTIKNRcrkr----ivplVQKYL 305  Nematocida paris...
EFA75633  1740 --------------------------mkqneLFARIGLAGRRVTNLHSGIFEKSEIISVLLRDekli-----pstLRGYL 1788 Polysphondylium ...
EAL46257   219 --------------------------tdqnaILARLMSIKKRASNLDYQISPKKALLRYLIKTptqk----iskmVKIYL 268  Entamoeba histol...
Feature 1      ##  ## ##  ## ## ###         ######## ############# ### ###### ########         
NP_012859  862 GDIQDHIVTMVSSLNHYEKLLSRSHSNYLAQINIDMTKVNNDMNDVLGKITILGTIVLPMNVITGLWGMNVIVPGQYRDS 941  Saccharomyces ce...
EFW44186  1135 RDVFDHVLGLMMSLEVSRETLNTAQSQYLGKVSIEVAFLSNEIAVVMKRLTYGATVLLPLTLVAGIFGMNIYLPFQLGSD 1214 Capsaspora owcza...
EAL68196   276 KNVQDHILRMLQKLTLSQRLLSNLNNIYMARVSLEVSDASNSVNRNMRKFTAISTIFIPLTLLAGIMGMNVRLPGMVGFP 355  Dictyostelium di...
EGC35278   372 KHIHDRSKRLKEKIKLSEDLLESTHGSYIGKISLTLNEESHALTVSMKRFANYSLISMPLILIATMFGMNIRLPGGVYYQ 451  Dictyostelium pu...
EAL51658   315 RDILDDTLRLLEKLQSLIDSIENHQETYFAKITLSVNRYGEEENKLMKDFGAIAILFLPMTFIASLFGMNVTVPGKDIQN 394  Entamoeba histol...
EAL64400   514 LHINNKSKRLKERIKLCEELLEGIHANYINKVSLVLNEESHALTISMKKFANYSLVSFPLILIATIFGMNCRVPGMIGFL 593  Dictyostelium di...
EGG22605   460 SNVKDRIGFLKQNMKLTEDLLENLKNVFLSKISLLVNEESHKLNISMSKFTTLSVIFLPITLAVTIMGMNIKIPGTTEHD 539  Dictyostelium fa...
EIJ94360   306 SESIEDLRDLSKKLGENHRVLERAQDTYLALLNVAQTQEGNEMNKSMRRMSLTALILSPCQLLSGIWGMNVRVPGEKNET 385  Nematocida paris...
EFA75633  1789 RNVQDSVVRMTQKLNLCRRLLGDLNNMYMARVSLEVSDSSNMININMRKFTAISTIFIPLILVTGIFGMNVKYPGMISDT 1868 Polysphondylium ...
EAL46257   269 RDVLEEAVIIVKRVDFVNDKIDDVTNTFLSRMTLDSYRVNRDQEELMKRFAIITTLFTPLTFLSTSFGMNVLVPGQEIDN 348  Entamoeba histol...
Feature 1      ##  ##  #               #  #   
NP_012859  942 LTWFIGIVLFm------CMLACSAYMYTKRR 966  Saccharomyces cerevisiae S288c
EFW44186  1215 QPLSDTFWPFifvmlfmAVLSFSIVYLVRRM 1245 Capsaspora owczarzaki ATCC 30864
EAL68196   356 HGDSYYFFIGiil--imLLFSIIVGSLFKRA 384  Dictyostelium discoideum AX4
EGC35278   452 DEDDGGVYFYlil-llmVLLGLLTSYLYKRI 481  Dictyostelium purpureum
EAL51658   395 LLWFSVIMII-------CLVWFVVGMIFFKN 418  Entamoeba histolytica HM-1:IMSS
EAL64400   594 EEGESGVIYFyiiilsmLIIGILTSYLYKKI 624  Dictyostelium discoideum AX4
EGG22605   540 KNETGLLSFFvia-vilGIIVIVNTFTLRKY 569  Dictyostelium fasciculatum
EIJ94360   386 LYPFFGIVFL-------SILPLVFYFYVPIR 409  Nematocida parisii ERTm1
EFA75633  1869 PEDDTYNLFIvim-slmGGFAIIVAALFRRA 1898 Polysphondylium pallidum PN500
EAL46257   349 YGMFIGLYVIai----aAMIGGISYFKLTHW 375  Entamoeba histolytica HM-1:IMSS

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap