Conserved Protein Domain Family
PrfC

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COG4108: PrfC 
Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis]
Peptide chain release factor RF-3 is part of the Pathway/BioSystem: Translation factors
Statistics
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PSSM-Id: 443284
Aligned: 352 rows
Threshold Bit Score: 765.768
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_069963341   1 MSPAQEIARRRTFAIISHPDAGKTTLTEKFLLYGNALHLAGSVTARKNQRATASDWMELEKQRGISISSTVLQFDFAGCA 80 
WP_043715573   6 DSLADQIRRRRTFAIISHPDAGKTTLTEKLLLYGGAIRLAGAVKGRKAARAATSDWMEIEKQRGISVTTSVMQFEYGGCM 85 
WP_011460057   3 ISLEKQIRFRKTFAIISHPDAGKTTLTEKLLLFGGAIHLAGNVKARKTQRYATSDWMELERQRGISITSSAMQFNYQGFV 82 
WP_013840694   2 SQILNEIQRRRTFAIISHPDAGKTTLTEKLLLYGGALRLAGTVKSRKSKQHAVSDWMELEKQRGISVTSSVLQFEYQGHK 81 
WP_014463618  12 LDAGSRYANRRTFAIISHPDAGKTTLTEKLLLFGGAIREAGAVKGRKARRHATSDWMEIEKQRGISVTSTVLQFDYMGCR 91 
WP_015253637   7 EELRTEVMRRRTFAIISHPDAGKTTLTEKLLLFGGAIREAGSVKARKANRHATSDWMEIEKQRGISVTSSVLQFDYKGHR 86 
WP_014183993   4 ADLKSEIAARKTFAIISHPDAGKTTLTEKLLLFGGAIREAGSVKARKAERYATSDWMELERQRGISITSSALQFEYQGYV 83 
WP_015044163   4 TTNQDQIKPRRTFAIISHPDAGKTTLTEKLLFFGGAIRLAGTVKGRKAAKYATSDWMQIEKERGISVTSSAMQFSYNGIH 83 
WP_096467019   1 ---mSTHEPRKTFAIISHPDAGKTTLTEKLLYFGGAIHTAGMVKSRKS-KAATSDWMEIEKQRGISVTSSVMQFNYNGYA 76 
WP_106012078  16 QELDREIDRRRTFAIISHPDAGKTTITEKFLLYGGAIHEAGSVRARKANRHATSDWMEIEKQRGISVTSSVMQFEYEGYC 95 
WP_069963341  81 VNLLDTPGHKDFSEDTYRVLTAVDAALMVIDAAKGVETQTRKLFEVCRRRGVPIFTFMNKCDRPTRNALDLLDELESVLG 160
WP_043715573  86 VNILDTPGHQDFSEDTYRTLEAADSAVMLIDAAKGVEPQTIKLFQVCRMRGIPIFTFVNKLDREGKDPFALMQEIEDVLG 165
WP_011460057  83 INILDTPGHQDFSEDTYRTLTAADSAVMLIDAAKGVETQTIKLFEVCRRRGIPIFTFINKMDREGKHPIDLMDEVEKVLG 162
WP_013840694  82 INILDTPGHQDFSEDTYRTLMAADSAVMLIDAAKGVEEQTKKLFHVCRKRGIPIFTFINKMDRHGREPLDLLDEIEKVLD 161
WP_014463618  92 LNLLDTPGHEDFSEDTYRTLAAADSAVMLIDAAKGVEPQTIKLFEVCRMRGIPIFTFVNKLDRHGKDPFELMEEIERVLG 171
WP_015253637  87 VNILDTPGHQDFSEDTYRTLTAADSAVMLIDAAKGVEAQTIKLFQVCAKRGIPIFTFINKLDREGRNPFDLMEEIERVLG 166
WP_014183993  84 VNILDTPGHQDFSEDTYRTLTAADSAVMLIDAAKGVEAQTKKLFEVCRKRGIPIFTFINKFDRNAKDPLDLMDEVEKVLG 163
WP_015044163  84 INILDTPGHEDFSEDTYRTLMAADSAVMLIDLVKGVEAQTIKLFKVCRMRGIPIFTFINKLDRFGKDPLDVLQEIEDVLG 163
WP_096467019  77 INILDTPGHQDFSEDTYRTLTAADSAVMLIDAAKGIEPQTIKLFEVCRMRGIPIFTFINKMDRDARDPLALLEDLEEVLG 156
WP_106012078  96 VNILDTPGHQDFSEDTYRTLTAADAAVMLIDGGKGVEPQTIKLFQVCRMRGIPIFTFVNKMDRAARSPFELMDEIEKVLG 175
WP_069963341 161 LQSSPVIWPLGNGPTFKGVIDRRTKEVHLFER--V-P-GGKFQAPVNVtSLEDPAVRDKLDDYTYNEVKEQLEMLDGAGH 236
WP_043715573 166 MRTCPMNWPVGMGSTFKGVYDRQKGHVELFDN--R-D-HGQTKARVETtGVDDPALSAVLGEDLHRRLVEEIELLDVAGD 241
WP_011460057 163 IEAYAMNWPIGGGADFKGIYDRQTGQVECFTD--G-L-RKGHDDTRQTgHIDDPWIKEWIGEDLLQRLREEIELLDMAGN 238
WP_013840694 162 IKSYPMNWPIGRGREFTGIFERQTANIELFTG--N-G-HGSTVVPTRRgDLTDPAIVGSMSKASYELLEEDLELLDMAGD 237
WP_014463618 172 IRSCPVTWPIGMGPDFQGIYHRMEGRFERFTS--R-A----DETRVPVpDLNDPALAEVLGESLWQKLKDDIELLDVAGD 244
WP_015253637 167 IRSVPMNWPIGMGRELCGVYDRMKHQVERFQG--N-N-HDTIEV-HKVdDYRDESVRAIAGDYLYEQLCQDLELLDVAGD 241
WP_014183993 164 IESFAMNWPIGMGQDFKGIYDRQTGQVERFME--G-S-ARSSSIPPVSgPLSDPSVQEGIGETLVKQLTDEIELLDMAGN 239
WP_015044163 164 INTVPLNWPVGMGKDFSAIYDRRHQCLELYRD--G----ERKRIDVGErGLEDPALKDCLEPALYDKLCEDLELLDIAGD 237
WP_096467019 157 IRSCPMNWPIGSGVDFQGVYDREKQQVEVFRK--GeAeHSRSFMPVFSeDADEAAVRARIGDTLYEKLEEDAELLDIAGD 234
WP_106012078 176 ISAFPFNWPIGIYGDFKGVYNRRTREVELFNDenE-D-HGASRVTVSVnSIEDPELDKILGTEYHETLMEEIELLDIAGD 253
WP_069963341 237 PFDLDAVRRGKQTPVYFGSAVNNFGIELLLNGFLQDSVPPAPRTSvsvsvpgmaqptTAREVPVDDPKFSAFVFKIQANM 316
WP_043715573 242 PWDFDRFRRGDLSPLFWGSALTNFGVQSFLEYFLKLAPAPAPRLA------------GDRLVDPEEPRFSAFVFKIQANM 309
WP_011460057 239 VFDQERMDRGEVTPVFFGSALNNFGVPNFLDSFLKLAPAPAPRQS------------NLGILEPASQQFVGFVFKIQANM 306
WP_013840694 238 QFDLQQVARGELTPVYFGSALTNFGVRAFLESFIQLSPCPHEKDS------------SSGPINPEQQEFSGFIFKIQANM 305
WP_014463618 245 PFDADLVRQGKLTPMYFGSAIANFGVASFLESFIQLAPAPGPRES------------SAGLVCPDDPVFTGFVFKIQANM 312
WP_015253637 242 PFDLEKVRRGELTPVFFGSAINNFGVQTFLENFLELAPAPTPRKS------------QNGEVEPLSPRFSGYIFKIQANM 309
WP_014183993 240 VFSQERVDRGEVTPVFFGSALNNFGVPNFLHYFLDLAPAPQPRST------------NLGELDPETPSFSGYIFKIQANM 307
WP_015044163 238 AFDEEMIQQGMLSPVFFGSALSSIGVQTFLEQFLEMAPEPRPQKS------------SVGYIQPTDPQFSGFIFKIQANM 305
WP_096467019 235 PFDQEKINSGKLTPVFFGSALTNFGVQSFLEYFLRLAPGPAPRMS------------DKGQVVPESSKLSGFIFKIQANM 302
WP_106012078 254 DLDFELINNGELTPMFFGSAISNFGVETFLQYFLKMSPSPSPRKS------------DQGLIDPNDEAFRGFIFKIQANM 321
WP_069963341 317 DPKHRDRIAFCRVCSGKFERDMVVTHQRTGKSVRLSSSHKLFGQERETVDVAWPGDVIGLVGHDAFGIGDTLTTD-RSIV 395
WP_043715573 310 NPAHRDRIAFMRIVSGRFERGMDVQHVRLGKKVRLSQPQQFMAQDRQIVEEAYAGDIIGVFDPGIFRIGDTLCTG-EPVA 388
WP_011460057 307 NAMHRDRIAFIRICSGRYERGMNVIHNRTHRKMRLAQPQQLFAQERTILDEAYAGDIIGVHDSGVLRIGDVLAEK-DGIE 385
WP_013840694 306 DPAHRDRIVFLRICSGVFNRGMMVKHVRTGKSIRLSQSKQFMAQDTNTVEVAYPGDIIGIYDPGVFRIGDTITEK-SKFS 384
WP_014463618 313 NPAHRDRVAFVRICSGKFARGMTVTHVRTGKRLALTQPQQFFGQERETVDEAYAGDIIGIHDPGLFRIGDTLAER-GSLE 391
WP_015253637 310 NPAHRDRIAFLRICSGRFERGMTVRHVRAGREIKLSQPQQFLAQDRDIVEKAYPGDIVGLFDPGIFRIGDSLAEK-EDIV 388
WP_014183993 308 NTQHRDRIAFIRICSGRYERGMNVIHTRSRRRLRLAQPQQLFAQERSILDEAYAGDIIGVHDSGLLRIGDVLTEK-DGLQ 386
WP_015044163 306 NPAHRDRIAFMRVCSGRFERGMAANHVRSGKKIKLPQPQQFLAQERDILEEAYPGDVVGLFDPGIFRIGDTLSEE-GTFE 384
WP_096467019 303 NPAHRDRIAFLRIVSGTFTRGMSVQHVRTGKKIKLSQPQQFLAQDRNIIEDAYAGDIIGLFDPGIFGIGDTLVEGnQAYS 382
WP_106012078 322 NPGHRDRLAFLRICSGKFEKDMEVVNVNSSKTIRLQQPQQFMAQDHKTVDQAYAGDIIGIYDPGIYRIGDSICSAgAEVN 401
WP_069963341 396 YDAIPRFPSEVFTYISNPNTGDAKKYRAGLEQLLQEGVVQSFSAKNapAGATLLAAVGPLQFEVVQWRLQSEYGAESRLT 475
WP_043715573 389 FEGIPSFSPEHFARVRFKDAMKSKHFRKGLEELTEEGAIQVFYATQpgHPDPILGAVGELQFEVFQHRMRHEYGVEVILD 468
WP_011460057 386 FEAMPFFSPENFARVSIANALKRKQFIKGIQELQEEGAIHVFRDLNigVEAPVIGVVGQLQFEVLEYRLRDEYGVEVQIN 465
WP_013840694 385 FEAIPKFQPELFARVHLRDAMKRKQFVKGIEQLTEEGAVQRFRHPDvgLEAPIIGAVGMLQFEVLEYRLTHEYGVDIQLD 464
WP_014463618 392 FPPLPSFSPEHFARVSVPNAMKYKQFHKGIAELSEEGAVQVFRQANr-TEDLILGAVGQLQFDVFVYRMKHEYGVDVELI 470
WP_015253637 389 FDELPTFSPELFAKVTVKNAMKHKQYQKGIDQLTEEGTVQVFYSTSg-FDETILGVVGQLQFEVFEYRMKVEYGVDIELH 467
WP_014183993 387 FEAMPFFSPENFARINIANALKRKQFIKGIQELQEEGAIHVFRDLHvgVEAPIIGVVGQLQFEVLEYRLREEYGVNVNIQ 466
WP_015044163 385 FEKLPQFAPEYFAKIINLDFSKYKQFQKGIKQLTEEGTVQVFRTFMdgPEGLIVGVVGKLQFEVLEYRLENEYGTRIQLH 464
WP_096467019 383 FAGVPHFSPEIFARVRAKDAMKYKQFHKGMQQLSEEGAVQYFTTAApgAENMILGVVGQLQLEVFEYRMRAEYGVEVEIQ 462
WP_106012078 402 FEAIPSFAPEHFARVQAKDSLKRKQFIKGMTQLAQEGTIQMYKEPSigTETYVVGVVGVLQFDVLRERLKNEYKVELVQS 481
WP_069963341 476 PTPWTVLRWLQIPD---SMQtpnkgfdFTRLIV-ATGVSFGSDKFDHPIGLFPNEWTMRYFTEKNPEIKLLELPPEQA 549
WP_043715573 469 RLPYEVARWVEGEG----YQ-------PRRFW--GTDHMAVTDRDGRNVLLFRNEWTMRYVVEQNPGLIFRATAQar- 532
WP_011460057 466 NLPYEMVQWIPKDE----EK-------IRILKE-SSMSMVVLDQDENYAVLLLDKWKANWLSERY-GVEFHPQPIRE- 529
WP_013840694 465 HLPFTLARWAAGDN----LT-------PPMLK--SADNLVLKDDDENLVVLFRNQWSFNWEVERNKRVTYLEQPPa-- 527
WP_014463618 471 RLPYQFARWLESDE-----P-------VEHLQFdRYATLVVRDRDGRTVLLFQTEFAMQWLLDKNPNVRLHKTSFELD 536
WP_015253637 468 RMPFQFARWLVGDK----ID-------TSKF---RINSTVVRDKKDRLVALFESEYALRTAMEKNPDVTFLETAP--- 528
WP_014183993 467 HLPFEIVRWVKKDE----KT-------IKLLSE-SSMSTVVVDKDDNYAVLLLDEWKANWLSDRY-EIEFFLQPFDV- 530
WP_015044163 465 HLLHHMARWVRSDK---PVD-------PANLR--GLRNLCVKDQDDQLVVLLEDEYYLDRLKDKYPEITFHTSSND-- 528
WP_096467019 463 PLGYSLARWVKGDK----KEh------ELNLIQ-YGGSLTVKDRAGRLVVLLENEFAERWAQEKNPDVEFVSTSYe-- 527
WP_106012078 482 NLNYRFARWVKFEKdapSKD-------LEDLDM-TSSTLLVEDHLGNPVLLFESQWAIDWIYDKNKGVVLTSINEGQN 551
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