Conserved Protein Domain Family
LptC_YrbK

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TIGR04409: LptC_YrbK 
LPS export ABC transporter periplasmic protein LptC
Members of this family are LptC, a periplasmic protein tethered to the inner membrane in the lipopolysaccharide (LPS)exporter transenvelope complex (Lpt), which is responsible for conducting LPS to the outer leaflet of the outer membrane in most Gram-negative bacteria. LptC is homologous to LptA, another member of the transenvelope complex. Genes lptC and lptA are often adjacent. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other]
Statistics
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PSSM-Id: 275202
Aligned: 68 rows
Threshold Bit Score: 98.4731
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011807207  14 LYLPVLLMGLLALGSWWLVRNaPRPQQPAQERPVSH---EPDYYMRDFAVKSFDATGRLQSEIRGTLARHYADNDTLEID 90  Acidovorax sp. ...
WP_011073696   4 vtLAIIAFFGTALVLYWQVQQ-KRGGDTDDSLNNSD---RPDYIIEDLRSIEFNEQGQVNSRVTAKHMEHYELKNQTDFT 79  Shewanella onei...
WP_011219810   5 RLFCALLIVICAWFGYYLLEN-RWKDDIQVEPDA-E---KPLFTGSIVTNTAFNESGMRSYQIDSEYLEHFSVSGDTDFD 79  Photobacterium ...
WP_011494950   4 vtLAIIAFFSASLFLYWQVQV-KRNAMEQIQVDVIE---RPAFIADELRSAEFDKQGLLVSKVTATHMEHYESTQVTHFT 79  Shewanella deni...
WP_011233660   5 vtVILILLFGAGLLLVWRPFS-DDADGNNAATTRTM---QPDFTAFGLETRIFESDGLLAHKIKSEKMSHYNQIGLTELK 80  Idiomarina loih...
WP_011573474   7 SIGLLFLLVIAINLPDWLADE-DLIPRTETESA--W---QPNYQASEMLSTLFDKDGRLSHQVFATKMEHFDLLGFTLFK 80  Pseudoalteromon...
WP_011261183   5 hLFMAVLLMICSWSGYNLYYD-YVKGEQQTTP-DQQ---VPVFTGKGITNNNYDVSGIRNYQINAKALARFGKTGETNFT 79  Aliivibrio fisc...
WP_011045269   8 aLFVLLLSALIYGIIEWRSAS-IEQDTLIVD---EQ---RPDFIAEQLESKIYSDLGQLSHTIEAERMEHYSDLEVSYFE 80  Colwellia psych...
WP_011329196   2 niarIVLSVLFIGCMVWLWYP-YFTQVNTVAKADSEviaKPDYTAIELKQTAFDENGEISHKVTAVKTELYEQLGFTLFE 80  Pseudoalteromon...
WP_011771147   3 krqsipfvlllaalliWLFFK-QEAVLPSLSV---H---HPSYIATDINSTHFNKTGFLDYKIFADKATNFNEDELTNFK 75  Psychromonas in...
WP_011807207  91 QARMRSV----NeEGRV-VTARANRALSNGDGSEVQLYGNAIVTREASApegrapVPRLEFQGEFLHAWVNEERVRSDQP 165 Acidovorax sp. ...
WP_011073696  80 QPVYLVY----PdQGKAkWQIRADLGRLNKETGKVVLENNVIIDAINPG------EPIQTLSTSFLELDLNTMIMTSDRI 149 Shewanella onei...
WP_011219810  80 KPVLWVY----RdGENTeWRISSNTAKLDKD-QVLQMTGNVRIFNLLPE------SIMKVMQTETLRLDLITKDFDTADH 148 Photobacterium ...
WP_011494950  80 EPVYLVY----PeSGKAqWQLQANKGRLNKQTGKMLLENNVIIDAINIE------EPVQSISTQSLAFDMNTMIMTSDDM 149 Shewanella deni...
WP_011233660  81 RPVYTVF----SeQGEElWEVSAAQGTFYDD-QTLILEHDVEILALEPD------THIEQVLTEYLIVDLKNESMSTEHP 149 Idiomarina loih...
WP_011573474  81 EPQYTIF----VaSQTApWQVSAKDGTLYEDN-RIQLENNVEIRNQDEQ------GFARSIRTDFIEINLIDKTMVSDQP 149 Pseudoalteromon...
WP_011261183  80 TPHLFVF----KdGELKeWEIISDLGVLNKK-HELYLSGNVIVKNLLPD------AAFETMTTDSMKIELTTKDFMTEDV 148 Aliivibrio fisc...
WP_011045269  81 LPNYTLY----PqKEGQpWKVSAQEATLYKDN-RVELKNQVHIKATEID------GLIKEIHCKTIALDLKTNIISSEQS 149 Colwellia psych...
WP_011329196  81 KPTFILY----D-DRQKtWRINADEATLYDERQLI-LEGNVTAQNLIDG------AMIDKITADNIQVDIMLLTMRSEQP 148 Pseudoalteromon...
WP_011771147  76 KPKVIVYthndQtDTTTiWQITSAVGALYQQ-DKLVLSKNVLVKNLSLD------QLVQTIKTEQLTLFLDKKELSSDLL 148 Psychromonas in...
WP_011807207 166 VTLKRGADTFTADSMDYDNLEQIMQLRGRVRGTL 199 Acidovorax sp. JS42
WP_011073696 150 IYVTGKDFNIQGQGLYADLNAQEVQLTSQVVGTY 183 Shewanella oneidensis
WP_011219810 149 VVITGTGFQNEGTGMKGNMDRSVATLLNNVKGRY 182 Photobacterium profundum
WP_011494950 150 LYVKGKDFIIQGLGLYADLEAEELTLLSQVEGTY 183 Shewanella denitrificans
WP_011233660 150 VSIHGPRLLIRGNGMTADLKAERMELKRHVKTIF 183 Idiomarina loihiensis
WP_011573474 150 VKIFGQHYVINSNGFKANLTTQQYELLDHVQTIY 183 Pseudoalteromonas atlantica
WP_011261183 149 VNLIGPTFETTGVGMKGNFTSQEATLLENVQGIY 182 Aliivibrio fischeri
WP_011045269 150 VVVVGRDFTMYGSGLIIDLNTKKMTLIQHERTIY 183 Colwellia psychrerythraea
WP_011329196 149 VIITGPNLKITGKGLEANLTTEVIKLINHTRTLY 182 Pseudoalteromonas haloplanktis
WP_011771147 149 VTLEGPQIHQQGVGMWASLVTEEVIIKDQIKAVY 182 Psychromonas ingrahamii
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